RNA–Protein interactions for RNA: ENST00000420522.1

LINC01646-201, Transcript of long intergenic non-protein coding RNA 1646, humanhuman

TSL 3 BASIC

Gene LINC01646, Length 682 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01646-201ENST00000420522 PPP1R1BQ9UD71 204 aaPredicted RBP6.66□□□□□ -1.34
LINC01646-201ENST00000420522 PCDHGC5Q9Y5F6 944 aa6.66□□□□□ -1.34
LINC01646-201ENST00000420522 SNCAIPQ9Y6H5 919 aa6.66□□□□□ -1.34
LINC01646-201ENST00000420522 SLFN14P0C7P3 912 aa6.65□□□□□ -1.34
LINC01646-201ENST00000420522 ZNF165P49910 485 aa6.65□□□□□ -1.34
LINC01646-201ENST00000420522 INSM1Q01101 510 aaPredicted RBP6.65□□□□□ -1.34
LINC01646-201ENST00000420522 ZC3H12AQ5D1E8 599 aaKnown RBP6.65□□□□□ -1.34
LINC01646-201ENST00000420522 LRFN4Q6PJG9 635 aa6.65□□□□□ -1.34
LINC01646-201ENST00000420522 HDXQ7Z353 690 aa6.65□□□□□ -1.34
LINC01646-201ENST00000420522 PLPPR2Q96GM1 343 aa6.65□□□□□ -1.34
LINC01646-201ENST00000420522 RUSC1Q9BVN2 902 aa6.65□□□□□ -1.34
LINC01646-201ENST00000420522 MRPL18Q9H0U6 180 aaKnown RBP6.65□□□□□ -1.34
LINC01646-201ENST00000420522 BRMS1Q9HCU9 246 aa6.65□□□□□ -1.34
LINC01646-201ENST00000420522 STRIP2Q9ULQ0 834 aa6.65□□□□□ -1.34
LINC01646-201ENST00000420522 POLR3KQ9Y2Y1 108 aaPredicted RBP6.65□□□□□ -1.34
LINC01646-201ENST00000420522 MCM4P33991 863 aa6.64□□□□□ -1.35
LINC01646-201ENST00000420522 WIPI1Q5MNZ9 446 aaPredicted RBP6.64□□□□□ -1.35
LINC01646-201ENST00000420522 ACAD11Q709F0 780 aa6.64□□□□□ -1.35
LINC01646-201ENST00000420522 CYFIP1Q7L576 1253 aa6.64□□□□□ -1.35
LINC01646-201ENST00000420522 TMEM130Q8N3G9 435 aa6.64□□□□□ -1.35
LINC01646-201ENST00000420522 DHX38Q92620 1227 aaKnown RBP6.64□□□□□ -1.35
LINC01646-201ENST00000420522 RNF208Q9H0X6 261 aa6.64□□□□□ -1.35
LINC01646-201ENST00000420522 EHMT1Q9H9B1 1298 aa6.64□□□□□ -1.35
LINC01646-201ENST00000420522 SUGCTQ9HAC7 445 aa6.64□□□□□ -1.35
LINC01646-201ENST00000420522 RAD18Q9NS91 495 aa6.64□□□□□ -1.35
LINC01646-201ENST00000420522 TACC3Q9Y6A5 838 aa6.64□□□□□ -1.35
LINC01646-201ENST00000420522 ATE1O95260 518 aa6.63□□□□□ -1.35
LINC01646-201ENST00000420522 SPATA31C1P0DKV0 1188 aa6.63□□□□□ -1.35
LINC01646-201ENST00000420522 GTF2F1P35269 517 aaKnown RBP eCLIP6.63□□□□□ -1.35
LINC01646-201ENST00000420522 CLCQ05315 142 aa6.63□□□□□ -1.35
LINC01646-201ENST00000420522 RING1Q06587 406 aa6.63□□□□□ -1.35
LINC01646-201ENST00000420522 RBL2Q08999 1139 aa6.63□□□□□ -1.35
LINC01646-201ENST00000420522 GRIK4Q16099 956 aa6.63□□□□□ -1.35
LINC01646-201ENST00000420522 NUTM2GQ5VZR2 741 aa6.63□□□□□ -1.35
LINC01646-201ENST00000420522 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.63□□□□□ -1.35
LINC01646-201ENST00000420522 SMG8Q8ND04 991 aaKnown RBP6.63□□□□□ -1.35
LINC01646-201ENST00000420522 PRR36Q9H6K5 1346 aa6.63□□□□□ -1.35
LINC01646-201ENST00000420522 PPT2Q9UMR5 302 aa6.63□□□□□ -1.35
LINC01646-201ENST00000420522 DCDC2CA8MYV0 355 aa6.62□□□□□ -1.35
LINC01646-201ENST00000420522 GRIN3BO60391 1043 aa6.62□□□□□ -1.35
LINC01646-201ENST00000420522 SSBP05455 408 aaKnown RBP eCLIP6.62□□□□□ -1.35
LINC01646-201ENST00000420522 COL8A1P27658 744 aa6.62□□□□□ -1.35
LINC01646-201ENST00000420522 ERVK-24P63145 666 aa6.62□□□□□ -1.35
LINC01646-201ENST00000420522 ID3Q02535 119 aa6.62□□□□□ -1.35
LINC01646-201ENST00000420522 SHISA2Q6UWI4 295 aa6.62□□□□□ -1.35
LINC01646-201ENST00000420522 GK5Q6ZS86 529 aa6.62□□□□□ -1.35
LINC01646-201ENST00000420522 C12orf40Q86WS4 652 aa6.62□□□□□ -1.35
LINC01646-201ENST00000420522 ELMO3Q96BJ8 720 aa6.62□□□□□ -1.35
LINC01646-201ENST00000420522 LENG1Q96BZ8 264 aaPredicted RBP6.62□□□□□ -1.35
LINC01646-201ENST00000420522 SCARF2Q96GP6 870 aaPredicted RBP6.62□□□□□ -1.35
LINC01646-201ENST00000420522 SRRTQ9BXP5 876 aaKnown RBP6.62□□□□□ -1.35
LINC01646-201ENST00000420522 CYP4F12Q9HCS2 524 aa6.62□□□□□ -1.35
LINC01646-201ENST00000420522 CRIM1Q9NZV1 1036 aa6.62□□□□□ -1.35
LINC01646-201ENST00000420522 PPP1R9AQ9ULJ8 1098 aa6.62□□□□□ -1.35
LINC01646-201ENST00000420522 ZNRF3Q9ULT6 936 aa6.62□□□□□ -1.35
LINC01646-201ENST00000420522 PCDHB14Q9Y5E9 798 aa6.62□□□□□ -1.35
LINC01646-201ENST00000420522 F8W735 103 aaPredicted RBP6.61□□□□□ -1.35
LINC01646-201ENST00000420522 TMPRSS2O15393 492 aa6.61□□□□□ -1.35
LINC01646-201ENST00000420522 TIAF1O95411 115 aa6.61□□□□□ -1.35
LINC01646-201ENST00000420522 IMPDH2P12268 514 aa6.61□□□□□ -1.35
LINC01646-201ENST00000420522 AKAP4Q5JQC9 854 aa6.61□□□□□ -1.35
LINC01646-201ENST00000420522 CPLX3Q8WVH0 158 aa6.61□□□□□ -1.35
LINC01646-201ENST00000420522 SHDQ96IW2 340 aa6.61□□□□□ -1.35
LINC01646-201ENST00000420522 FERD3LQ96RJ6 166 aa6.61□□□□□ -1.35
LINC01646-201ENST00000420522 HIF3AQ9Y2N7 669 aa6.61□□□□□ -1.35
LINC01646-201ENST00000420522 CSADQ9Y600 493 aa6.61□□□□□ -1.35
LINC01646-201ENST00000420522 STK10O94804 968 aaKnown RBP6.6□□□□□ -1.35
LINC01646-201ENST00000420522 HTR3BO95264 441 aa6.6□□□□□ -1.35
LINC01646-201ENST00000420522 ADH5P11766 374 aa6.6□□□□□ -1.35
LINC01646-201ENST00000420522 SOX4Q06945 474 aaPredicted RBP6.6□□□□□ -1.35
LINC01646-201ENST00000420522 CCDC81Q6ZN84 652 aa6.6□□□□□ -1.35
LINC01646-201ENST00000420522 RBBP8NLQ8NC74 664 aaPredicted RBP6.6□□□□□ -1.35
LINC01646-201ENST00000420522 HIRIP3Q9BW71 556 aaPredicted RBP6.6□□□□□ -1.35
LINC01646-201ENST00000420522 ZNF408Q9H9D4 720 aa6.6□□□□□ -1.35
LINC01646-201ENST00000420522 DISC1Q9NRI5 854 aa6.6□□□□□ -1.35
LINC01646-201ENST00000420522 PRAMEF27A3QJZ7 478 aa6.59□□□□□ -1.35
LINC01646-201ENST00000420522 C9orf172C9J069 976 aa6.59□□□□□ -1.35
LINC01646-201ENST00000420522 FANCGO15287 622 aa6.59□□□□□ -1.35
LINC01646-201ENST00000420522 DRD2P14416 443 aa6.59□□□□□ -1.35
LINC01646-201ENST00000420522 ETFBP38117 255 aa6.59□□□□□ -1.35
LINC01646-201ENST00000420522 GIPRP48546 466 aa6.59□□□□□ -1.35
LINC01646-201ENST00000420522 EIF6P56537 245 aaKnown RBP6.59□□□□□ -1.35
LINC01646-201ENST00000420522 NRG1Q02297 640 aaPredicted RBP6.59□□□□□ -1.35
LINC01646-201ENST00000420522 PDE4BQ07343 736 aa6.59□□□□□ -1.35
LINC01646-201ENST00000420522 PPM1JQ5JR12 505 aa6.59□□□□□ -1.35
LINC01646-201ENST00000420522 ZBTB37Q5TC79 503 aa6.59□□□□□ -1.35
LINC01646-201ENST00000420522 ANKRD34AQ69YU3 496 aa6.59□□□□□ -1.35
LINC01646-201ENST00000420522 Q6ZS46 218 aa6.59□□□□□ -1.35
LINC01646-201ENST00000420522 ALYREFQ86V81 257 aaKnown RBP6.59□□□□□ -1.35
LINC01646-201ENST00000420522 AGGF1Q8N302 714 aaeCLIP6.59□□□□□ -1.35
LINC01646-201ENST00000420522 FANCD2OSQ96PS1 177 aa6.59□□□□□ -1.35
LINC01646-201ENST00000420522 NACC1Q96RE7 527 aa6.59□□□□□ -1.35
LINC01646-201ENST00000420522 DNAJC2Q99543 621 aaKnown RBP6.59□□□□□ -1.35
LINC01646-201ENST00000420522 WNT10AQ9GZT5 417 aa6.59□□□□□ -1.35
LINC01646-201ENST00000420522 ATXN3LQ9H3M9 355 aa6.59□□□□□ -1.35
LINC01646-201ENST00000420522 GSX1Q9H4S2 264 aaPredicted RBP6.59□□□□□ -1.35
LINC01646-201ENST00000420522 AKTIPQ9H8T0 292 aa6.59□□□□□ -1.35
LINC01646-201ENST00000420522 CORINQ9Y5Q5 1042 aa6.59□□□□□ -1.35
LINC01646-201ENST00000420522 MRVI1Q9Y6F6 885 aa6.59□□□□□ -1.35
LINC01646-201ENST00000420522 ALX3O95076 343 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms