RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 CWC27Q6UX04 472 aaKnown RBP19.84■□□□□ 0.77
TSPAN4-208ENST00000409531 TMOD2Q9NZR1 351 aa19.84■□□□□ 0.77
TSPAN4-208ENST00000409531 DAGLAQ9Y4D2 1042 aa19.84■□□□□ 0.77
TSPAN4-208ENST00000409531 TCP10L2B9ZVM9 353 aa19.83■□□□□ 0.77
TSPAN4-208ENST00000409531 PLCG2P16885 1265 aa19.83■□□□□ 0.77
TSPAN4-208ENST00000409531 TTLL12Q14166 644 aaPredicted RBP19.83■□□□□ 0.77
TSPAN4-208ENST00000409531 MCMDC2Q4G0Z9 681 aa19.83■□□□□ 0.77
TSPAN4-208ENST00000409531 AIDAQ96BJ3 306 aa19.83■□□□□ 0.77
TSPAN4-208ENST00000409531 ECM29Q5VYK3 1845 aa19.83■□□□□ 0.77
TSPAN4-208ENST00000409531 GPR75-ASB3A0A0A6YYF3 556 aa19.82■□□□□ 0.76
TSPAN4-208ENST00000409531 MAGEB6P1A0A0J9YX57 407 aa19.82■□□□□ 0.76
TSPAN4-208ENST00000409531 UBE2Q2LH0YL09 131 aa19.82■□□□□ 0.76
TSPAN4-208ENST00000409531 MAP2K2P36507 400 aa19.82■□□□□ 0.76
TSPAN4-208ENST00000409531 ZNF157P51786 506 aaPredicted RBP19.82■□□□□ 0.76
TSPAN4-208ENST00000409531 MOB2Q70IA6 237 aa19.82■□□□□ 0.76
TSPAN4-208ENST00000409531 ARMC9Q7Z3E5 817 aa19.82■□□□□ 0.76
TSPAN4-208ENST00000409531 OSBP2Q969R2 916 aa19.82■□□□□ 0.76
TSPAN4-208ENST00000409531 CCDC102AQ96A19 550 aa19.82■□□□□ 0.76
TSPAN4-208ENST00000409531 FAM227BQ96M60 508 aa19.82■□□□□ 0.76
TSPAN4-208ENST00000409531 A0A0D9SFI3 127 aa19.81■□□□□ 0.76
TSPAN4-208ENST00000409531 PPP1R12BO60237 982 aaPredicted RBP19.81■□□□□ 0.76
TSPAN4-208ENST00000409531 CACNB3P54284 484 aa19.81■□□□□ 0.76
TSPAN4-208ENST00000409531 PPP4CP60510 307 aa19.81■□□□□ 0.76
TSPAN4-208ENST00000409531 NBPF12Q5TAG4 269 aaPredicted RBP19.81■□□□□ 0.76
TSPAN4-208ENST00000409531 CDC42EP5Q6NZY7 148 aa19.81■□□□□ 0.76
TSPAN4-208ENST00000409531 ADGRA1Q86SQ6 560 aa19.81■□□□□ 0.76
TSPAN4-208ENST00000409531 FAM83AQ86UY5 434 aa19.81■□□□□ 0.76
TSPAN4-208ENST00000409531 PUS7LQ9H0K6 701 aaKnown RBP19.81■□□□□ 0.76
TSPAN4-208ENST00000409531 CHGBP05060 677 aa19.8■□□□□ 0.76
TSPAN4-208ENST00000409531 BTDP43251 543 aa19.8■□□□□ 0.76
TSPAN4-208ENST00000409531 PRKG1Q13976 671 aa19.8■□□□□ 0.76
TSPAN4-208ENST00000409531 SLFNL1Q499Z3 407 aa19.8■□□□□ 0.76
TSPAN4-208ENST00000409531 MIGA1Q8NAN2 632 aa19.8■□□□□ 0.76
TSPAN4-208ENST00000409531 TEPSINQ96N21 525 aa19.8■□□□□ 0.76
TSPAN4-208ENST00000409531 USP40Q9NVE5 1235 aa19.8■□□□□ 0.76
TSPAN4-208ENST00000409531 AATFQ9NY61 560 aaKnown RBP eCLIP19.8■□□□□ 0.76
TSPAN4-208ENST00000409531 SGSM2O43147 1006 aa19.79■□□□□ 0.76
TSPAN4-208ENST00000409531 MBD4O95243 580 aa19.79■□□□□ 0.76
TSPAN4-208ENST00000409531 GNAT2P19087 354 aa19.79■□□□□ 0.76
TSPAN4-208ENST00000409531 MAP2K1Q02750 393 aaPredicted RBP19.79■□□□□ 0.76
TSPAN4-208ENST00000409531 NOGQ13253 232 aa19.79■□□□□ 0.76
TSPAN4-208ENST00000409531 CDK5RAP2Q96SN8 1893 aa19.79■□□□□ 0.76
TSPAN4-208ENST00000409531 ESYT1Q9BSJ8 1104 aa19.79■□□□□ 0.76
TSPAN4-208ENST00000409531 TMEM39BQ9GZU3 492 aa19.79■□□□□ 0.76
TSPAN4-208ENST00000409531 ANGEL1Q9UNK9 670 aaKnown RBP19.79■□□□□ 0.76
TSPAN4-208ENST00000409531 CCDC171Q6TFL3 1326 aa19.79■□□□□ 0.76
TSPAN4-208ENST00000409531 FOCADQ5VW36 1801 aa19.78■□□□□ 0.76
TSPAN4-208ENST00000409531 FAM155AB1AL88 458 aaPredicted RBP19.78■□□□□ 0.76
TSPAN4-208ENST00000409531 M0R2C6 588 aa19.78■□□□□ 0.76
TSPAN4-208ENST00000409531 GPAA1O43292 621 aa19.78■□□□□ 0.76
TSPAN4-208ENST00000409531 AOC2O75106 756 aa19.78■□□□□ 0.76
TSPAN4-208ENST00000409531 MAP3K11Q16584 847 aa19.78■□□□□ 0.76
TSPAN4-208ENST00000409531 LDLRAD1Q5T700 205 aa19.78■□□□□ 0.76
TSPAN4-208ENST00000409531 SEC62Q99442 399 aaKnown RBP19.78■□□□□ 0.76
TSPAN4-208ENST00000409531 RIOK1Q9BRS2 568 aaKnown RBP19.78■□□□□ 0.76
TSPAN4-208ENST00000409531 WBP1LQ9NX94 342 aa19.78■□□□□ 0.76
TSPAN4-208ENST00000409531 PAPPA2Q9BXP8 1791 aa19.78■□□□□ 0.76
TSPAN4-208ENST00000409531 FOXN1O15353 648 aa19.77■□□□□ 0.76
TSPAN4-208ENST00000409531 FAM151AQ8WW52 585 aa19.77■□□□□ 0.76
TSPAN4-208ENST00000409531 STRBPQ96SI9 672 aaKnown RBP19.77■□□□□ 0.76
TSPAN4-208ENST00000409531 CRNKL1Q9BZJ0 848 aaKnown RBP19.77■□□□□ 0.76
TSPAN4-208ENST00000409531 UNCXA6NJT0 531 aa19.76■□□□□ 0.75
TSPAN4-208ENST00000409531 USP2O75604 605 aaPredicted RBP19.76■□□□□ 0.75
TSPAN4-208ENST00000409531 REC8O95072 547 aa19.76■□□□□ 0.75
TSPAN4-208ENST00000409531 DYNLL1P63167 89 aaKnown RBP19.76■□□□□ 0.75
TSPAN4-208ENST00000409531 C8orf34Q49A92 452 aa19.76■□□□□ 0.75
TSPAN4-208ENST00000409531 KIAA1211Q6ZU35 1233 aa19.76■□□□□ 0.75
TSPAN4-208ENST00000409531 LCORLQ8N3X6 602 aa19.76■□□□□ 0.75
TSPAN4-208ENST00000409531 ARMT1Q9H993 441 aa19.76■□□□□ 0.75
TSPAN4-208ENST00000409531 FZD1Q9UP38 647 aa19.76■□□□□ 0.75
TSPAN4-208ENST00000409531 RPAP1Q9BWH6 1393 aaPredicted RBP19.76■□□□□ 0.75
TSPAN4-208ENST00000409531 SLC10A3P09131 477 aa19.76■□□□□ 0.75
TSPAN4-208ENST00000409531 NFIAQ12857 509 aa19.76■□□□□ 0.75
TSPAN4-208ENST00000409531 CCDC129Q6ZRS4 1044 aa19.76■□□□□ 0.75
TSPAN4-208ENST00000409531 ZNF589Q86UQ0 364 aaPredicted RBP19.76■□□□□ 0.75
TSPAN4-208ENST00000409531 CDAN1Q8IWY9 1227 aa19.76■□□□□ 0.75
TSPAN4-208ENST00000409531 TEX11Q8IYF3 940 aa19.76■□□□□ 0.75
TSPAN4-208ENST00000409531 IDI2Q9BXS1 227 aa19.76■□□□□ 0.75
TSPAN4-208ENST00000409531 IREB2P48200 963 aaKnown RBP19.75■□□□□ 0.75
TSPAN4-208ENST00000409531 RHBDL3P58872 404 aa19.75■□□□□ 0.75
TSPAN4-208ENST00000409531 TCP10Q12799 353 aa19.75■□□□□ 0.75
TSPAN4-208ENST00000409531 SH3RF3Q8TEJ3 882 aaPredicted RBP19.75■□□□□ 0.75
TSPAN4-208ENST00000409531 HOOK2Q96ED9 719 aa19.75■□□□□ 0.75
TSPAN4-208ENST00000409531 DDRGK1Q96HY6 314 aa19.75■□□□□ 0.75
TSPAN4-208ENST00000409531 ZIC5Q96T25 663 aa19.75■□□□□ 0.75
TSPAN4-208ENST00000409531 FAM198AQ9UFP1 575 aa19.75■□□□□ 0.75
TSPAN4-208ENST00000409531 SLC4A4Q9Y6R1 1079 aa19.75■□□□□ 0.75
TSPAN4-208ENST00000409531 SSC5DA1L4H1 1573 aa19.74■□□□□ 0.75
TSPAN4-208ENST00000409531 ENTPD3O75355 529 aa19.74■□□□□ 0.75
TSPAN4-208ENST00000409531 KIF23Q02241 960 aaPredicted RBP19.74■□□□□ 0.75
TSPAN4-208ENST00000409531 RASAL3Q86YV0 1011 aa19.74■□□□□ 0.75
TSPAN4-208ENST00000409531 SLC10A4Q96EP9 437 aa19.74■□□□□ 0.75
TSPAN4-208ENST00000409531 BEGAINQ9BUH8 593 aa19.74■□□□□ 0.75
TSPAN4-208ENST00000409531 NACAP1Q9BZK3 213 aa19.74■□□□□ 0.75
TSPAN4-208ENST00000409531 IL25Q9H293 177 aa19.74■□□□□ 0.75
TSPAN4-208ENST00000409531 ATP8A2Q9NTI2 1148 aa19.74■□□□□ 0.75
TSPAN4-208ENST00000409531 NAV1Q8NEY1 1877 aa19.73■□□□□ 0.75
TSPAN4-208ENST00000409531 MYH1P12882 1939 aa19.73■□□□□ 0.75
TSPAN4-208ENST00000409531 PATL2C9JE40 543 aaKnown RBP19.73■□□□□ 0.75
TSPAN4-208ENST00000409531 APPP05067 770 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms