RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 CTNNBL1Q8WYA6 563 aaPredicted RBP11.17□□□□□ -0.62
PTPRM-203ENST00000400060 CCDC97Q96F63 343 aaPredicted RBP11.17□□□□□ -0.62
PTPRM-203ENST00000400060 SYCP2Q9BX26 1530 aa11.17□□□□□ -0.62
PTPRM-203ENST00000400060 GDAP1L1Q96MZ0 367 aa11.17□□□□□ -0.62
PTPRM-203ENST00000400060 PIK3R4Q99570 1358 aa11.17□□□□□ -0.62
PTPRM-203ENST00000400060 AKR1B10O60218 316 aa11.17□□□□□ -0.62
PTPRM-203ENST00000400060 PACS2Q86VP3 889 aa11.17□□□□□ -0.62
PTPRM-203ENST00000400060 DHX58Q96C10 678 aa11.17□□□□□ -0.62
PTPRM-203ENST00000400060 MTRF1LQ9UGC7 380 aaKnown RBP11.17□□□□□ -0.62
PTPRM-203ENST00000400060 CUTAO60888 179 aa11.16□□□□□ -0.62
PTPRM-203ENST00000400060 TCP1P17987 556 aaKnown RBP11.16□□□□□ -0.62
PTPRM-203ENST00000400060 TRIM21P19474 475 aaKnown RBP11.16□□□□□ -0.62
PTPRM-203ENST00000400060 CUL3Q13618 768 aa11.16□□□□□ -0.62
PTPRM-203ENST00000400060 NAA30Q147X3 362 aaPredicted RBP11.16□□□□□ -0.62
PTPRM-203ENST00000400060 RRS1Q15050 365 aaKnown RBP11.16□□□□□ -0.62
PTPRM-203ENST00000400060 CFAP221Q4G0U5 840 aa11.16□□□□□ -0.62
PTPRM-203ENST00000400060 RNF14Q9UBS8 474 aa11.16□□□□□ -0.62
PTPRM-203ENST00000400060 DAAM1Q9Y4D1 1078 aa11.16□□□□□ -0.62
PTPRM-203ENST00000400060 IRX4P78413 519 aa11.16□□□□□ -0.62
PTPRM-203ENST00000400060 TAF11Q15544 211 aa11.16□□□□□ -0.62
PTPRM-203ENST00000400060 CCDC42Q96M95 316 aa11.16□□□□□ -0.62
PTPRM-203ENST00000400060 ATP6V0A4Q9HBG4 840 aa11.16□□□□□ -0.62
PTPRM-203ENST00000400060 CIB2O75838 187 aa11.16□□□□□ -0.62
PTPRM-203ENST00000400060 HPDP32754 393 aaPredicted RBP11.16□□□□□ -0.62
PTPRM-203ENST00000400060 E2F5Q15329 346 aa11.16□□□□□ -0.62
PTPRM-203ENST00000400060 FBXO41Q8TF61 875 aa11.16□□□□□ -0.62
PTPRM-203ENST00000400060 A1CFQ9NQ94 594 aaKnown RBP11.16□□□□□ -0.62
PTPRM-203ENST00000400060 TTC21AQ8NDW8 1320 aa11.16□□□□□ -0.62
PTPRM-203ENST00000400060 ATXN2Q99700 1313 aaKnown RBP11.16□□□□□ -0.62
PTPRM-203ENST00000400060 EIF3HO15372 352 aaKnown RBP eCLIP11.16□□□□□ -0.622e-6■■□□□ 13.4
PTPRM-203ENST00000400060 CCZ1BP86790 482 aa11.16□□□□□ -0.62
PTPRM-203ENST00000400060 CCZ1P86791 482 aaPredicted RBP11.16□□□□□ -0.62
PTPRM-203ENST00000400060 FAM212AQ96EL1 285 aa11.16□□□□□ -0.62
PTPRM-203ENST00000400060 ZSWIM6Q9HCJ5 1215 aa11.16□□□□□ -0.62
PTPRM-203ENST00000400060 FYB1O15117 783 aa11.15□□□□□ -0.62
PTPRM-203ENST00000400060 Q6ZUG5 572 aa11.15□□□□□ -0.62
PTPRM-203ENST00000400060 ARHGEF25Q86VW2 580 aa11.15□□□□□ -0.62
PTPRM-203ENST00000400060 LARP6Q9BRS8 491 aaKnown RBP11.15□□□□□ -0.62
PTPRM-203ENST00000400060 TANGO6Q9C0B7 1094 aa11.15□□□□□ -0.62
PTPRM-203ENST00000400060 PTPDC1A2A3K4 754 aa11.15□□□□□ -0.62
PTPRM-203ENST00000400060 ZFXP17010 805 aaPredicted RBP11.15□□□□□ -0.62
PTPRM-203ENST00000400060 RANBP1P43487 201 aa11.15□□□□□ -0.62
PTPRM-203ENST00000400060 SSRP1Q08945 709 aaKnown RBP11.15□□□□□ -0.62
PTPRM-203ENST00000400060 DZIP1Q86YF9 867 aaKnown RBP11.15□□□□□ -0.62
PTPRM-203ENST00000400060 IFT81Q8WYA0 676 aa11.15□□□□□ -0.62
PTPRM-203ENST00000400060 RPAP1Q9BWH6 1393 aaPredicted RBP11.15□□□□□ -0.62
PTPRM-203ENST00000400060 ZNF202O95125 648 aa11.15□□□□□ -0.62
PTPRM-203ENST00000400060 TBC1D8O95759 1140 aa11.15□□□□□ -0.62
PTPRM-203ENST00000400060 VIMP08670 466 aaKnown RBP11.15□□□□□ -0.62
PTPRM-203ENST00000400060 GLE1Q53GS7 698 aaKnown RBP11.15□□□□□ -0.62
PTPRM-203ENST00000400060 SDCCAG8Q86SQ7 713 aaPredicted RBP11.15□□□□□ -0.62
PTPRM-203ENST00000400060 FNBP4Q8N3X1 1017 aaPredicted RBP11.15□□□□□ -0.62
PTPRM-203ENST00000400060 HYOU1Q9Y4L1 999 aa11.15□□□□□ -0.62
PTPRM-203ENST00000400060 PTCH1Q13635 1447 aa11.15□□□□□ -0.63
PTPRM-203ENST00000400060 GOLGA8BA8MQT2 603 aa11.15□□□□□ -0.63
PTPRM-203ENST00000400060 MTIF2P46199 727 aaKnown RBP11.15□□□□□ -0.63
PTPRM-203ENST00000400060 SMTNP53814 917 aa11.15□□□□□ -0.63
PTPRM-203ENST00000400060 CDK5RAP3Q96JB5 506 aa11.15□□□□□ -0.63
PTPRM-203ENST00000400060 NAP1L3Q99457 506 aaPredicted RBP11.15□□□□□ -0.63
PTPRM-203ENST00000400060 UBAC1Q9BSL1 405 aa11.15□□□□□ -0.63
PTPRM-203ENST00000400060 A2MP01023 1474 aa11.15□□□□□ -0.63
PTPRM-203ENST00000400060 STXBP3O00186 592 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 PPFIA2O75334 1257 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 MEIS3Q99687 375 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 CENPKQ9BS16 269 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 MIS12Q9H081 205 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 NLRP2Q9NX02 1062 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 SAMM50Q9Y512 469 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 TTC21BQ7Z4L5 1316 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 SKIP12755 728 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 PPP2R5EQ16537 467 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 MIEF2Q96C03 454 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 PPANQ9NQ55 473 aaKnown RBP11.14□□□□□ -0.63
PTPRM-203ENST00000400060 ITGB1BP2Q9UKP3 347 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 TBC1D2BQ9UPU7 963 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 RABGAP1Q9Y3P9 1069 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 BICDL2A1A5D9 508 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 EVA1CP58658 441 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 KIAA0753Q2KHM9 967 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 WHAMMQ8TF30 809 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 UBLCP1Q8WVY7 318 aaPredicted RBP11.14□□□□□ -0.63
PTPRM-203ENST00000400060 CEP63Q96MT8 703 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 TPX2Q9ULW0 747 aaKnown RBP11.14□□□□□ -0.63
PTPRM-203ENST00000400060 DISP1Q96F81 1524 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 LRRC31Q6UY01 552 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 C11orf57Q6ZUT1 292 aaPredicted RBP11.14□□□□□ -0.63
PTPRM-203ENST00000400060 EGFL6Q8IUX8 553 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 MFN1Q8IWA4 741 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 ZCCHC17Q9NP64 241 aaKnown RBP11.14□□□□□ -0.63
PTPRM-203ENST00000400060 STAP2Q9UGK3 403 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 MSH6P52701 1360 aa11.14□□□□□ -0.63
PTPRM-203ENST00000400060 NR1D1P20393 614 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 GUCY1B3Q02153 619 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 SCRN1Q12765 414 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 PSMD2Q13200 908 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 CCDC144BQ3MJ40 725 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 ANO1Q5XXA6 986 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 CCDC144CPQ8IYA2 1237 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 PPP1R12CQ9BZL4 782 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 ZRANB1Q9UGI0 708 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms