RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 CEP350Q5VT06 3117 aa8.15□□□□□ -1.1
UBBP1-201ENST00000392399 RPAP1Q9BWH6 1393 aaPredicted RBP8.15□□□□□ -1.1
UBBP1-201ENST00000392399 TRIM6-TRIM34B2RNG4 842 aa8.15□□□□□ -1.1
UBBP1-201ENST00000392399 HIP1O00291 1037 aa8.15□□□□□ -1.1
UBBP1-201ENST00000392399 GALR2O43603 387 aaPredicted RBP8.15□□□□□ -1.1
UBBP1-201ENST00000392399 WDHD1O75717 1129 aaPredicted RBP8.15□□□□□ -1.1
UBBP1-201ENST00000392399 PDE4AP27815 886 aa8.15□□□□□ -1.1
UBBP1-201ENST00000392399 RGS3P49796 1198 aa8.15□□□□□ -1.1
UBBP1-201ENST00000392399 NFIAQ12857 509 aa8.15□□□□□ -1.1
UBBP1-201ENST00000392399 ADGRA1Q86SQ6 560 aa8.15□□□□□ -1.1
UBBP1-201ENST00000392399 SH3RF3Q8TEJ3 882 aaPredicted RBP8.15□□□□□ -1.1
UBBP1-201ENST00000392399 APPBP2Q92624 585 aa8.15□□□□□ -1.1
UBBP1-201ENST00000392399 TEPSINQ96N21 525 aa8.15□□□□□ -1.1
UBBP1-201ENST00000392399 PHF12Q96QT6 1004 aa8.15□□□□□ -1.1
UBBP1-201ENST00000392399 RIOK1Q9BRS2 568 aaKnown RBP8.15□□□□□ -1.1
UBBP1-201ENST00000392399 FSD1Q9BTV5 496 aa8.15□□□□□ -1.1
UBBP1-201ENST00000392399 CRNKL1Q9BZJ0 848 aaKnown RBP8.15□□□□□ -1.1
UBBP1-201ENST00000392399 DHX36Q9H2U1 1008 aaKnown RBP8.15□□□□□ -1.1
UBBP1-201ENST00000392399 GBA2Q9HCG7 927 aaPredicted RBP8.15□□□□□ -1.1
UBBP1-201ENST00000392399 CNTNAP1P78357 1384 aa8.14□□□□□ -1.11
UBBP1-201ENST00000392399 RFX7Q2KHR2 1363 aa8.14□□□□□ -1.11
UBBP1-201ENST00000392399 GNAT2P19087 354 aa8.14□□□□□ -1.11
UBBP1-201ENST00000392399 CACNB3P54284 484 aa8.14□□□□□ -1.11
UBBP1-201ENST00000392399 DYNLL1P63167 89 aaKnown RBP8.14□□□□□ -1.11
UBBP1-201ENST00000392399 MAP3K10Q02779 954 aa8.14□□□□□ -1.11
UBBP1-201ENST00000392399 FMR1Q06787 632 aaKnown RBP eCLIP8.14□□□□□ -1.11
UBBP1-201ENST00000392399 MAP3K11Q16584 847 aa8.14□□□□□ -1.11
UBBP1-201ENST00000392399 TTC22Q5TAA0 569 aa8.14□□□□□ -1.11
UBBP1-201ENST00000392399 NBPF12Q5TAG4 269 aaPredicted RBP8.14□□□□□ -1.11
UBBP1-201ENST00000392399 DCAF15Q66K64 600 aa8.14□□□□□ -1.11
UBBP1-201ENST00000392399 LHX8Q68G74 356 aa8.14□□□□□ -1.11
UBBP1-201ENST00000392399 ARMC9Q7Z3E5 817 aa8.14□□□□□ -1.11
UBBP1-201ENST00000392399 SAPCD2Q86UD0 394 aa8.14□□□□□ -1.11
UBBP1-201ENST00000392399 MIGA1Q8NAN2 632 aa8.14□□□□□ -1.11
UBBP1-201ENST00000392399 RILPL2Q969X0 211 aa8.14□□□□□ -1.11
UBBP1-201ENST00000392399 AIDAQ96BJ3 306 aa8.14□□□□□ -1.11
UBBP1-201ENST00000392399 TMEM39BQ9GZU3 492 aa8.14□□□□□ -1.11
UBBP1-201ENST00000392399 OSBPL5Q9H0X9 879 aaPredicted RBP8.14□□□□□ -1.11
UBBP1-201ENST00000392399 ZNF408Q9H9D4 720 aa8.14□□□□□ -1.11
UBBP1-201ENST00000392399 ATP8A2Q9NTI2 1148 aa8.14□□□□□ -1.11
UBBP1-201ENST00000392399 TAOK2Q9UL54 1235 aa8.14□□□□□ -1.11
UBBP1-201ENST00000392399 TLL2Q9Y6L7 1015 aa8.14□□□□□ -1.11
UBBP1-201ENST00000392399 ECM29Q5VYK3 1845 aa8.14□□□□□ -1.11
UBBP1-201ENST00000392399 ATRNL1Q5VV63 1379 aa8.13□□□□□ -1.11
UBBP1-201ENST00000392399 DOCK2Q92608 1830 aa8.13□□□□□ -1.11
UBBP1-201ENST00000392399 RASSF10A6NK89 507 aa8.13□□□□□ -1.11
UBBP1-201ENST00000392399 TBC1D12O60347 775 aa8.13□□□□□ -1.11
UBBP1-201ENST00000392399 USP5P45974 858 aa8.13□□□□□ -1.11
UBBP1-201ENST00000392399 IREB2P48200 963 aaKnown RBP8.13□□□□□ -1.11
UBBP1-201ENST00000392399 TCP10Q12799 353 aa8.13□□□□□ -1.11
UBBP1-201ENST00000392399 PICALMQ13492 652 aa8.13□□□□□ -1.11
UBBP1-201ENST00000392399 DEFB115Q30KQ5 88 aa8.13□□□□□ -1.11
UBBP1-201ENST00000392399 ZMYM1Q5SVZ6 1142 aa8.13□□□□□ -1.11
UBBP1-201ENST00000392399 PRAMEF18Q5VWM3 479 aa8.13□□□□□ -1.11
UBBP1-201ENST00000392399 GIMAP6Q6P9H5 292 aa8.13□□□□□ -1.11
UBBP1-201ENST00000392399 DLK2Q6UY11 383 aa8.13□□□□□ -1.11
UBBP1-201ENST00000392399 TTC6Q86TZ1 520 aa8.13□□□□□ -1.11
UBBP1-201ENST00000392399 FOXP4Q8IVH2 680 aaPredicted RBP8.13□□□□□ -1.11
UBBP1-201ENST00000392399 ZSCAN29Q8IWY8 852 aaPredicted RBP8.13□□□□□ -1.11
UBBP1-201ENST00000392399 TGFBRAP1Q8WUH2 860 aa8.13□□□□□ -1.11
UBBP1-201ENST00000392399 OSBP2Q969R2 916 aa8.13□□□□□ -1.11
UBBP1-201ENST00000392399 DDRGK1Q96HY6 314 aa8.13□□□□□ -1.11
UBBP1-201ENST00000392399 CSRNP1Q96S65 589 aa8.13□□□□□ -1.11
UBBP1-201ENST00000392399 STRBPQ96SI9 672 aaKnown RBP8.13□□□□□ -1.11
UBBP1-201ENST00000392399 PUS7LQ9H0K6 701 aaKnown RBP8.13□□□□□ -1.11
UBBP1-201ENST00000392399 DDX4Q9NQI0 724 aaKnown RBP8.13□□□□□ -1.11
UBBP1-201ENST00000392399 HELLSQ9NRZ9 838 aa8.13□□□□□ -1.11
UBBP1-201ENST00000392399 PI4KBQ9UBF8 816 aa8.13□□□□□ -1.11
UBBP1-201ENST00000392399 ABT1Q9ULW3 272 aaKnown RBP8.13□□□□□ -1.11
UBBP1-201ENST00000392399 SCAF8Q9UPN6 1271 aaKnown RBP8.13□□□□□ -1.11
UBBP1-201ENST00000392399 COL2A1P02458 1487 aaPredicted RBP8.13□□□□□ -1.11
UBBP1-201ENST00000392399 FLT1P17948 1338 aa8.12□□□□□ -1.11
UBBP1-201ENST00000392399 PATL2C9JE40 543 aaKnown RBP8.12□□□□□ -1.11
UBBP1-201ENST00000392399 USP2O75604 605 aaPredicted RBP8.12□□□□□ -1.11
UBBP1-201ENST00000392399 MBD4O95243 580 aa8.12□□□□□ -1.11
UBBP1-201ENST00000392399 HLA-DOAP06340 250 aa8.12□□□□□ -1.11
UBBP1-201ENST00000392399 SDSP20132 328 aa8.12□□□□□ -1.11
UBBP1-201ENST00000392399 ECE1P42892 770 aa8.12□□□□□ -1.11
UBBP1-201ENST00000392399 MFAP1P55081 439 aaKnown RBP8.12□□□□□ -1.11
UBBP1-201ENST00000392399 HUNKP57058 714 aa8.12□□□□□ -1.11
UBBP1-201ENST00000392399 TTLL12Q14166 644 aaPredicted RBP8.12□□□□□ -1.11
UBBP1-201ENST00000392399 MCMDC2Q4G0Z9 681 aa8.12□□□□□ -1.11
UBBP1-201ENST00000392399 LDLRAD1Q5T700 205 aa8.12□□□□□ -1.11
UBBP1-201ENST00000392399 METTL16Q86W50 562 aaKnown RBP8.12□□□□□ -1.11
UBBP1-201ENST00000392399 ZFPM1Q8IX07 1006 aa8.12□□□□□ -1.11
UBBP1-201ENST00000392399 AMOTL1Q8IY63 956 aa8.12□□□□□ -1.11
UBBP1-201ENST00000392399 ANKRD13AQ8IZ07 590 aa8.12□□□□□ -1.11
UBBP1-201ENST00000392399 CCDC102AQ96A19 550 aa8.12□□□□□ -1.11
UBBP1-201ENST00000392399 KLRG1Q96E93 195 aa8.12□□□□□ -1.11
UBBP1-201ENST00000392399 ZNF341Q9BYN7 854 aa8.12□□□□□ -1.11
UBBP1-201ENST00000392399 ARMT1Q9H993 441 aa8.12□□□□□ -1.11
UBBP1-201ENST00000392399 MKRN1Q9UHC7 482 aaKnown RBP8.12□□□□□ -1.11
UBBP1-201ENST00000392399 HERC5Q9UII4 1024 aaKnown RBP8.12□□□□□ -1.11
UBBP1-201ENST00000392399 ANGEL1Q9UNK9 670 aaKnown RBP8.12□□□□□ -1.11
UBBP1-201ENST00000392399 MYO5AQ9Y4I1 1855 aaKnown RBP8.12□□□□□ -1.11
UBBP1-201ENST00000392399 MAST2Q6P0Q8 1798 aa8.12□□□□□ -1.11
UBBP1-201ENST00000392399 TRPM7Q96QT4 1865 aa8.11□□□□□ -1.11
UBBP1-201ENST00000392399 DDTLA6NHG4 134 aaPredicted RBP8.11□□□□□ -1.11
UBBP1-201ENST00000392399 GPAA1O43292 621 aa8.11□□□□□ -1.11
UBBP1-201ENST00000392399 GSPT1P15170 499 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms