RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 SBK1Q52WX2 424 aa25.2■■□□□ 1.62
GMDS-202ENST00000380815 RRP12Q5JTH9 1297 aaKnown RBP25.2■■□□□ 1.62
GMDS-202ENST00000380815 FOXD4L3Q6VB84 417 aaPredicted RBP25.2■■□□□ 1.62
GMDS-202ENST00000380815 TMEM87AQ8NBN3 555 aa25.2■■□□□ 1.62
GMDS-202ENST00000380815 GZF1Q9H116 711 aaPredicted RBP25.2■■□□□ 1.62
GMDS-202ENST00000380815 ARPP21Q9UBL0 812 aaPredicted RBP25.2■■□□□ 1.62
GMDS-202ENST00000380815 BAZ2AQ9UIF9 1905 aaKnown RBP25.2■■□□□ 1.62
GMDS-202ENST00000380815 MROH7-TTC4A0A0A0MT08 1334 aa25.19■■□□□ 1.62
GMDS-202ENST00000380815 RIMBP2O15034 1052 aa25.19■■□□□ 1.62
GMDS-202ENST00000380815 APOA5Q6Q788 366 aa25.19■■□□□ 1.62
GMDS-202ENST00000380815 ESR2Q92731 530 aa25.19■■□□□ 1.62
GMDS-202ENST00000380815 NOL10Q9BSC4 688 aaKnown RBP25.19■■□□□ 1.62
GMDS-202ENST00000380815 CNKSR1Q969H4 720 aa25.18■■□□□ 1.62
GMDS-202ENST00000380815 SLF2Q8IX21 1173 aa25.18■■□□□ 1.62
GMDS-202ENST00000380815 TMTC2Q8N394 836 aa25.18■■□□□ 1.62
GMDS-202ENST00000380815 FAM163AQ96GL9 167 aaPredicted RBP25.18■■□□□ 1.62
GMDS-202ENST00000380815 EYA3Q99504 573 aa25.18■■□□□ 1.62
GMDS-202ENST00000380815 RTFDC1Q9BY42 306 aaPredicted RBP25.18■■□□□ 1.62
GMDS-202ENST00000380815 MKRN1Q9UHC7 482 aaKnown RBP25.18■■□□□ 1.62
GMDS-202ENST00000380815 SUGT1Q9Y2Z0 365 aa25.18■■□□□ 1.62
GMDS-202ENST00000380815 CYP2D7A0A087X1C5 515 aa25.17■■□□□ 1.62
GMDS-202ENST00000380815 H3BQV1 296 aa25.17■■□□□ 1.62
GMDS-202ENST00000380815 CPLX1O14810 134 aa25.17■■□□□ 1.62
GMDS-202ENST00000380815 IFFO2Q5TF58 517 aa25.17■■□□□ 1.62
GMDS-202ENST00000380815 NFXL1Q6ZNB6 911 aa25.17■■□□□ 1.62
GMDS-202ENST00000380815 SENP2Q9HC62 589 aa25.17■■□□□ 1.62
GMDS-202ENST00000380815 ERICH2A1L162 156 aa25.16■■□□□ 1.62
GMDS-202ENST00000380815 METAP2P50579 478 aaKnown RBP eCLIP25.16■■□□□ 1.62
GMDS-202ENST00000380815 STK11IPQ8N1F8 1099 aa25.16■■□□□ 1.62
GMDS-202ENST00000380815 CNPY2Q9Y2B0 182 aa25.16■■□□□ 1.62
GMDS-202ENST00000380815 GPR75-ASB3A0A0A6YYF3 556 aa25.16■■□□□ 1.62
GMDS-202ENST00000380815 SMIM22K7EJ46 135 aa25.16■■□□□ 1.62
GMDS-202ENST00000380815 ZBTB43O43298 467 aa25.16■■□□□ 1.62
GMDS-202ENST00000380815 MBD3O95983 291 aa25.16■■□□□ 1.62
GMDS-202ENST00000380815 SLC3A2P08195 630 aaKnown RBP25.16■■□□□ 1.62
GMDS-202ENST00000380815 FDPSP14324 419 aaKnown RBP25.16■■□□□ 1.62
GMDS-202ENST00000380815 GTF2IP78347 998 aa25.16■■□□□ 1.62
GMDS-202ENST00000380815 USP48Q86UV5 1035 aa25.16■■□□□ 1.62
GMDS-202ENST00000380815 GPT2Q8TD30 523 aa25.16■■□□□ 1.62
GMDS-202ENST00000380815 SH3RF3Q8TEJ3 882 aaPredicted RBP25.16■■□□□ 1.62
GMDS-202ENST00000380815 SLC12A7Q9Y666 1083 aa25.16■■□□□ 1.62
GMDS-202ENST00000380815 MYH2Q9UKX2 1941 aa25.15■■□□□ 1.62
GMDS-202ENST00000380815 CCDC69A6NI79 296 aa25.15■■□□□ 1.62
GMDS-202ENST00000380815 CHRNA5P30532 468 aa25.15■■□□□ 1.62
GMDS-202ENST00000380815 DNM1Q05193 864 aaKnown RBP25.15■■□□□ 1.62
GMDS-202ENST00000380815 WTAPQ15007 396 aa25.15■■□□□ 1.62
GMDS-202ENST00000380815 FERMT3Q86UX7 667 aa25.15■■□□□ 1.62
GMDS-202ENST00000380815 UBAC1Q9BSL1 405 aa25.15■■□□□ 1.62
GMDS-202ENST00000380815 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.15■■□□□ 1.62
GMDS-202ENST00000380815 TCHHQ07283 1943 aa25.14■■□□□ 1.62
GMDS-202ENST00000380815 LAMB1P07942 1786 aa25.14■■□□□ 1.62
GMDS-202ENST00000380815 ORC4O43929 436 aa25.14■■□□□ 1.62
GMDS-202ENST00000380815 USP5P45974 858 aa25.14■■□□□ 1.62
GMDS-202ENST00000380815 CSPP1Q1MSJ5 1256 aa25.14■■□□□ 1.62
GMDS-202ENST00000380815 SLC16A10Q8TF71 515 aa25.14■■□□□ 1.62
GMDS-202ENST00000380815 PDGFDQ9GZP0 370 aaPredicted RBP25.14■■□□□ 1.62
GMDS-202ENST00000380815 ZSCAN16Q9H4T2 348 aaPredicted RBP25.14■■□□□ 1.62
GMDS-202ENST00000380815 GDPD2Q9HCC8 539 aa25.14■■□□□ 1.62
GMDS-202ENST00000380815 MCM9Q9NXL9 1143 aa25.14■■□□□ 1.62
GMDS-202ENST00000380815 GAKO14976 1311 aa25.14■■□□□ 1.61
GMDS-202ENST00000380815 NID2Q14112 1375 aa25.14■■□□□ 1.61
GMDS-202ENST00000380815 CDKL5O76039 1030 aa25.13■■□□□ 1.61
GMDS-202ENST00000380815 PLCG2P16885 1265 aa25.13■■□□□ 1.61
GMDS-202ENST00000380815 RCAN1P53805 252 aa25.13■■□□□ 1.61
GMDS-202ENST00000380815 SYNE3Q6ZMZ3 975 aa25.13■■□□□ 1.61
GMDS-202ENST00000380815 RAB11FIP4Q86YS3 637 aa25.13■■□□□ 1.61
GMDS-202ENST00000380815 SLX4Q8IY92 1834 aa25.13■■□□□ 1.61
GMDS-202ENST00000380815 BTDP43251 543 aa25.13■■□□□ 1.61
GMDS-202ENST00000380815 NT5C2P49902 561 aa25.13■■□□□ 1.61
GMDS-202ENST00000380815 CPLX2Q6PUV4 134 aaKnown RBP25.13■■□□□ 1.61
GMDS-202ENST00000380815 MICU3Q86XE3 530 aa25.13■■□□□ 1.61
GMDS-202ENST00000380815 ZKSCAN3Q9BRR0 538 aa25.13■■□□□ 1.61
GMDS-202ENST00000380815 RGS22Q8NE09 1264 aa25.12■■□□□ 1.61
GMDS-202ENST00000380815 C7orf43Q8WVR3 580 aa25.12■■□□□ 1.61
GMDS-202ENST00000380815 NCLP19338 710 aaKnown RBP25.11■■□□□ 1.61
GMDS-202ENST00000380815 KRT85P78386 507 aa25.11■■□□□ 1.61
GMDS-202ENST00000380815 PDE4BQ07343 736 aa25.11■■□□□ 1.61
GMDS-202ENST00000380815 RESTQ13127 1097 aa25.11■■□□□ 1.61
GMDS-202ENST00000380815 SEC23AQ15436 765 aa25.11■■□□□ 1.61
GMDS-202ENST00000380815 DOK7Q18PE1 504 aa25.11■■□□□ 1.61
GMDS-202ENST00000380815 C12orf60Q5U649 245 aa25.11■■□□□ 1.61
GMDS-202ENST00000380815 PODNQ7Z5L7 613 aa25.11■■□□□ 1.61
GMDS-202ENST00000380815 ORC3Q9UBD5 711 aaPredicted RBP25.11■■□□□ 1.61
GMDS-202ENST00000380815 C10orf71Q711Q0 1435 aa25.11■■□□□ 1.61
GMDS-202ENST00000380815 GOLGA8AA7E2F4 631 aa25.1■■□□□ 1.61
GMDS-202ENST00000380815 G3V3G9 751 aa25.1■■□□□ 1.61
GMDS-202ENST00000380815 RANBP6O60518 1105 aaKnown RBP25.1■■□□□ 1.61
GMDS-202ENST00000380815 ADD1P35611 737 aaKnown RBP25.1■■□□□ 1.61
GMDS-202ENST00000380815 DCAF8Q5TAQ9 597 aa25.1■■□□□ 1.61
GMDS-202ENST00000380815 CC2D2BQ6DHV5 1058 aa25.1■■□□□ 1.61
GMDS-202ENST00000380815 ZSCAN10Q96SZ4 725 aaPredicted RBP25.1■■□□□ 1.61
GMDS-202ENST00000380815 TNKSO95271 1327 aa25.1■■□□□ 1.61
GMDS-202ENST00000380815 USP17L8P0C7I0 530 aa25.1■■□□□ 1.61
GMDS-202ENST00000380815 CYP2D6P10635 497 aa25.1■■□□□ 1.61
GMDS-202ENST00000380815 CDC27P30260 824 aa25.1■■□□□ 1.61
GMDS-202ENST00000380815 IQCA1Q86XH1 822 aa25.1■■□□□ 1.61
GMDS-202ENST00000380815 CCDC125Q86Z20 511 aa25.1■■□□□ 1.61
GMDS-202ENST00000380815 AMOTL1Q8IY63 956 aa25.1■■□□□ 1.61
GMDS-202ENST00000380815 TGFBRAP1Q8WUH2 860 aa25.1■■□□□ 1.61
GMDS-202ENST00000380815 FAM217BQ9NTX9 383 aaPredicted RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms