RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 USHBP1Q8N6Y0 703 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 GOLGA5Q8TBA6 731 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 RIMS2Q9UQ26 1411 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 RLBP1P12271 317 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 ZSCAN26Q16670 478 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 XAGE3Q8WTP9 111 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 LUC7L3O95232 432 aaKnown RBP10.7□□□□□ -0.7
SNX1-202ENST00000380285 GNA14O95837 355 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 CEP85LQ5SZL2 805 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 UTP14CQ5TAP6 766 aaKnown RBP10.7□□□□□ -0.7
SNX1-202ENST00000380285 APBB1IPQ7Z5R6 666 aaPredicted RBP10.7□□□□□ -0.7
SNX1-202ENST00000380285 MAST1Q9Y2H9 1570 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 ZNF202O95125 648 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 MAP2K2P36507 400 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 HAUS3Q68CZ6 603 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 WWC3Q9ULE0 1092 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 TLDC2A0PJX2 215 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 SGSM2O43147 1006 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 FLOT1O75955 427 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 SNX16P57768 344 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 PLCB3Q01970 1234 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 LGSNQ5TDP6 509 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 LZTS2Q9BRK4 669 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 ANGEL1Q9UNK9 670 aaKnown RBP10.7□□□□□ -0.7
SNX1-202ENST00000380285 CTNND2Q9UQB3 1225 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 ATP5J2-PTCD1G3V325 749 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 CASQ2O14958 399 aaPredicted RBP10.7□□□□□ -0.7
SNX1-202ENST00000380285 TRIM58Q8NG06 486 aa10.7□□□□□ -0.7
SNX1-202ENST00000380285 TRAPPC8Q9Y2L5 1435 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 SLC27A2O14975 620 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 TRIML1Q8N9V2 468 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 MRFAP1L1Q96HT8 127 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 BRD1O95696 1058 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 ZNF804AQ7Z570 1209 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 C16orf71Q8IYS4 520 aaPredicted RBP10.69□□□□□ -0.7
SNX1-202ENST00000380285 SMARCC2Q8TAQ2 1214 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 FAM71BQ8TC56 605 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 PSMD1Q99460 953 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 NYXQ9GZU5 481 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 MCM7P33993 719 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 ARID5AQ03989 594 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 ASIC2Q16515 512 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 RNF10Q8N5U6 811 aaKnown RBP10.69□□□□□ -0.7
SNX1-202ENST00000380285 MAK16Q9BXY0 300 aaKnown RBP10.69□□□□□ -0.7
SNX1-202ENST00000380285 EXOC5O00471 708 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 MAP7Q14244 749 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 DCAF8L1A6NGE4 600 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 LMBR1LQ6UX01 489 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.69□□□□□ -0.7
SNX1-202ENST00000380285 MCUR1Q96AQ8 359 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 TCEANC2Q96MN5 208 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 BCL2L12Q9HB09 334 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 SEC24BO95487 1268 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 STX17P56962 302 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 LIN9Q5TKA1 542 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 CCDC25Q86WR0 208 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 FAM169AQ9Y6X4 670 aa10.69□□□□□ -0.7
SNX1-202ENST00000380285 FAM135BQ49AJ0 1406 aa10.68□□□□□ -0.7
SNX1-202ENST00000380285 CNGA1P29973 690 aa10.68□□□□□ -0.7
SNX1-202ENST00000380285 HPDP32754 393 aaPredicted RBP10.68□□□□□ -0.7
SNX1-202ENST00000380285 TPD52P55327 224 aaPredicted RBP10.68□□□□□ -0.7
SNX1-202ENST00000380285 PSDA5PKW4 1024 aaPredicted RBP10.68□□□□□ -0.7
SNX1-202ENST00000380285 POSTNQ15063 836 aa10.68□□□□□ -0.7
SNX1-202ENST00000380285 COPS6Q7L5N1 327 aa10.68□□□□□ -0.7
SNX1-202ENST00000380285 PSMC4P43686 418 aa10.68□□□□□ -0.7
SNX1-202ENST00000380285 ST5P78524 1137 aa10.68□□□□□ -0.7
SNX1-202ENST00000380285 SAR1BQ9Y6B6 198 aa10.68□□□□□ -0.7
SNX1-202ENST00000380285 RAB11FIP4Q86YS3 637 aa10.68□□□□□ -0.7
SNX1-202ENST00000380285 VPS52Q8N1B4 723 aa10.68□□□□□ -0.7
SNX1-202ENST00000380285 SYCP2Q9BX26 1530 aa10.68□□□□□ -0.7
SNX1-202ENST00000380285 ZWINTO95229 277 aa10.68□□□□□ -0.7
SNX1-202ENST00000380285 CCT6AP40227 531 aaKnown RBP10.68□□□□□ -0.7
SNX1-202ENST00000380285 DENND2CQ68D51 928 aa10.68□□□□□ -0.7
SNX1-202ENST00000380285 SMC1BQ8NDV3 1235 aa10.68□□□□□ -0.7
SNX1-202ENST00000380285 MYCBPQ99417 103 aaPredicted RBP10.68□□□□□ -0.7
SNX1-202ENST00000380285 SNX14Q9Y5W7 946 aa10.68□□□□□ -0.7
SNX1-202ENST00000380285 GPTP24298 496 aa10.68□□□□□ -0.7
SNX1-202ENST00000380285 RBM6P78332 1123 aaKnown RBP10.68□□□□□ -0.7
SNX1-202ENST00000380285 NCBP1Q09161 790 aaKnown RBP10.68□□□□□ -0.7
SNX1-202ENST00000380285 P3H4Q92791 437 aa10.68□□□□□ -0.7
SNX1-202ENST00000380285 ANKRD2Q9GZV1 360 aa10.68□□□□□ -0.7
SNX1-202ENST00000380285 MYO1AQ9UBC5 1043 aa10.68□□□□□ -0.7
SNX1-202ENST00000380285 ODF2LQ9ULJ1 636 aa10.68□□□□□ -0.7
SNX1-202ENST00000380285 ZNF518AQ6AHZ1 1483 aa10.68□□□□□ -0.7
SNX1-202ENST00000380285 CSGALNACT2Q8N6G5 542 aa10.67□□□□□ -0.7
SNX1-202ENST00000380285 TESK2Q96S53 571 aa10.67□□□□□ -0.7
SNX1-202ENST00000380285 TRAF5O00463 557 aa10.67□□□□□ -0.7
SNX1-202ENST00000380285 ADALQ6DHV7 355 aa10.67□□□□□ -0.7
SNX1-202ENST00000380285 ZNF365Q70YC5 407 aa10.67□□□□□ -0.7
SNX1-202ENST00000380285 CETN3O15182 167 aa10.67□□□□□ -0.7
SNX1-202ENST00000380285 RNF40O75150 1001 aa10.67□□□□□ -0.7
SNX1-202ENST00000380285 TRIM37O94972 964 aa10.67□□□□□ -0.7
SNX1-202ENST00000380285 TNFAIP3P21580 790 aa10.67□□□□□ -0.7
SNX1-202ENST00000380285 ABCC2Q92887 1545 aa10.67□□□□□ -0.7
SNX1-202ENST00000380285 PLCH2O75038 1416 aa10.67□□□□□ -0.7
SNX1-202ENST00000380285 VWA3AA6NCI4 1184 aa10.67□□□□□ -0.7
SNX1-202ENST00000380285 I3L4J1 428 aa10.67□□□□□ -0.7
SNX1-202ENST00000380285 EIF4A2Q14240 407 aaKnown RBP10.67□□□□□ -0.7
SNX1-202ENST00000380285 WDR44Q5JSH3 913 aa10.67□□□□□ -0.7
SNX1-202ENST00000380285 RBM26Q5T8P6 1007 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms