RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 A0A1W2PQ27 194 aa14.88□□□□□ -0.03
USP11-204ENST00000377107 A0A1W2PQ64 194 aa14.88□□□□□ -0.03
USP11-204ENST00000377107 A0A1W2PQD8 194 aa14.88□□□□□ -0.03
USP11-204ENST00000377107 PES1O00541 588 aaKnown RBP14.88□□□□□ -0.03
USP11-204ENST00000377107 PAXBP1Q9Y5B6 917 aa14.88□□□□□ -0.03
USP11-204ENST00000377107 EPB41L4AQ9HCS5 686 aaPredicted RBP14.88□□□□□ -0.03
USP11-204ENST00000377107 CAMTA1Q9Y6Y1 1673 aa14.88□□□□□ -0.03
USP11-204ENST00000377107 PATL2C9JE40 543 aaKnown RBP14.87□□□□□ -0.03
USP11-204ENST00000377107 URI1O94763 535 aaPredicted RBP14.87□□□□□ -0.03
USP11-204ENST00000377107 CASP1P29466 404 aa14.87□□□□□ -0.03
USP11-204ENST00000377107 AXDND1Q5T1B0 1012 aaPredicted RBP14.87□□□□□ -0.03
USP11-204ENST00000377107 AKNAD1Q5T1N1 836 aa14.87□□□□□ -0.03
USP11-204ENST00000377107 VPS54Q9P1Q0 977 aa14.87□□□□□ -0.03
USP11-204ENST00000377107 TMEM232C9JQI7 657 aa14.87□□□□□ -0.03
USP11-204ENST00000377107 GSDMDP57764 484 aa14.87□□□□□ -0.03
USP11-204ENST00000377107 RASSF8Q8NHQ8 419 aa14.87□□□□□ -0.03
USP11-204ENST00000377107 DHX58Q96C10 678 aa14.87□□□□□ -0.03
USP11-204ENST00000377107 UBN2Q6ZU65 1347 aa14.87□□□□□ -0.03
USP11-204ENST00000377107 NEMFO60524 1076 aa14.87□□□□□ -0.03
USP11-204ENST00000377107 CCZ1BP86790 482 aa14.87□□□□□ -0.03
USP11-204ENST00000377107 CCZ1P86791 482 aaPredicted RBP14.87□□□□□ -0.03
USP11-204ENST00000377107 UBE3CQ15386 1083 aa14.87□□□□□ -0.03
USP11-204ENST00000377107 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.87□□□□□ -0.03
USP11-204ENST00000377107 LY9Q9HBG7 655 aa14.87□□□□□ -0.03
USP11-204ENST00000377107 ARMCX5Q6P1M9 558 aa14.86□□□□□ -0.03
USP11-204ENST00000377107 SARM1Q6SZW1 724 aa14.86□□□□□ -0.03
USP11-204ENST00000377107 OXER1Q8TDS5 423 aa14.86□□□□□ -0.03
USP11-204ENST00000377107 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.86□□□□□ -0.03
USP11-204ENST00000377107 SERTAD1Q9UHV2 236 aa14.86□□□□□ -0.03
USP11-204ENST00000377107 BAZ2BQ9UIF8 2168 aaKnown RBP14.86□□□□□ -0.03
USP11-204ENST00000377107 TRIM28Q13263 835 aaKnown RBP14.86□□□□□ -0.03
USP11-204ENST00000377107 ZNF771Q7L3S4 317 aaPredicted RBP14.86□□□□□ -0.03
USP11-204ENST00000377107 TMEM87BQ96K49 555 aa14.86□□□□□ -0.03
USP11-204ENST00000377107 MYL5Q02045 173 aa14.86□□□□□ -0.03
USP11-204ENST00000377107 NKX1-1Q15270 411 aaPredicted RBP14.86□□□□□ -0.03
USP11-204ENST00000377107 KRI1Q8N9T8 703 aaKnown RBP14.86□□□□□ -0.03
USP11-204ENST00000377107 IGDCC4Q8TDY8 1250 aa14.86□□□□□ -0.03
USP11-204ENST00000377107 PCDHB6Q9Y5E3 794 aa14.86□□□□□ -0.03
USP11-204ENST00000377107 FAM205CA6NFA0 338 aa14.85□□□□□ -0.03
USP11-204ENST00000377107 DYNLL1P63167 89 aaKnown RBP14.85□□□□□ -0.03
USP11-204ENST00000377107 USP49Q70CQ1 688 aa14.85□□□□□ -0.03
USP11-204ENST00000377107 NBPF11Q86T75 865 aa14.85□□□□□ -0.03
USP11-204ENST00000377107 ZSWIM4Q9H7M6 989 aa14.85□□□□□ -0.03
USP11-204ENST00000377107 CCDC152Q4G0S7 254 aa14.85□□□□□ -0.03
USP11-204ENST00000377107 NOSTRINQ8IVI9 506 aa14.85□□□□□ -0.03
USP11-204ENST00000377107 MNS1Q8NEH6 495 aa14.85□□□□□ -0.03
USP11-204ENST00000377107 V9GY48 417 aaPredicted RBP14.85□□□□□ -0.03
USP11-204ENST00000377107 GSG1L2A8MUP6 293 aa14.84□□□□□ -0.03
USP11-204ENST00000377107 GTF2F1P35269 517 aaKnown RBP eCLIP14.84□□□□□ -0.03
USP11-204ENST00000377107 ADKP55263 362 aaKnown RBP14.84□□□□□ -0.03
USP11-204ENST00000377107 CDC25BP30305 580 aa14.84□□□□□ -0.03
USP11-204ENST00000377107 ERCC6LQ2NKX8 1250 aa14.84□□□□□ -0.03
USP11-204ENST00000377107 KRT23Q9C075 422 aa14.84□□□□□ -0.03
USP11-204ENST00000377107 HOOK1Q9UJC3 728 aaKnown RBP14.84□□□□□ -0.03
USP11-204ENST00000377107 N4BP2Q86UW6 1770 aaPredicted RBP14.84□□□□□ -0.03
USP11-204ENST00000377107 CHRNDQ07001 517 aa14.84□□□□□ -0.03
USP11-204ENST00000377107 ZNF174Q15697 407 aa14.84□□□□□ -0.03
USP11-204ENST00000377107 SMARCE1Q969G3 411 aa14.84□□□□□ -0.03
USP11-204ENST00000377107 TFCP2L1Q9NZI6 479 aa14.84□□□□□ -0.03
USP11-204ENST00000377107 FBXO3Q9UK99 471 aa14.84□□□□□ -0.03
USP11-204ENST00000377107 CPDO75976 1380 aa14.83□□□□□ -0.03
USP11-204ENST00000377107 PRR29P0C7W0 189 aa14.83□□□□□ -0.03
USP11-204ENST00000377107 CRKLP46109 303 aaKnown RBP14.83□□□□□ -0.03
USP11-204ENST00000377107 SMYD4Q8IYR2 804 aaPredicted RBP14.83□□□□□ -0.03
USP11-204ENST00000377107 NFE2L3Q9Y4A8 694 aa14.83□□□□□ -0.03
USP11-204ENST00000377107 ZNF654Q8IZM8 581 aa14.83□□□□□ -0.04
USP11-204ENST00000377107 CRYBG1Q9Y4K1 1723 aa14.83□□□□□ -0.04
USP11-204ENST00000377107 MAGEB6P1A0A0J9YX57 407 aa14.83□□□□□ -0.04
USP11-204ENST00000377107 PDE4BQ07343 736 aa14.83□□□□□ -0.04
USP11-204ENST00000377107 KARSQ15046 597 aaKnown RBP14.83□□□□□ -0.04
USP11-204ENST00000377107 DDB1Q16531 1140 aa14.83□□□□□ -0.04
USP11-204ENST00000377107 FAM47AQ5JRC9 791 aa14.83□□□□□ -0.04
USP11-204ENST00000377107 KRBA2Q6ZNG9 492 aa14.83□□□□□ -0.04
USP11-204ENST00000377107 METTL16Q86W50 562 aaKnown RBP14.83□□□□□ -0.04
USP11-204ENST00000377107 CCDC150Q8NCX0 1101 aa14.83□□□□□ -0.04
USP11-204ENST00000377107 PPP1R13BQ96KQ4 1090 aa14.83□□□□□ -0.04
USP11-204ENST00000377107 SCN11AQ9UI33 1791 aa14.83□□□□□ -0.04
USP11-204ENST00000377107 COL5A2P05997 1499 aaPredicted RBP14.82□□□□□ -0.04
USP11-204ENST00000377107 E4F1Q66K89 784 aaPredicted RBP14.82□□□□□ -0.04
USP11-204ENST00000377107 WASF1Q92558 559 aa14.82□□□□□ -0.04
USP11-204ENST00000377107 CNNM2Q9H8M5 875 aa14.82□□□□□ -0.04
USP11-204ENST00000377107 MAPK8IP1Q9UQF2 711 aa14.82□□□□□ -0.04
USP11-204ENST00000377107 MROH5Q6ZUA9 1318 aa14.82□□□□□ -0.04
USP11-204ENST00000377107 FANCBQ8NB91 859 aa14.82□□□□□ -0.04
USP11-204ENST00000377107 DESI2Q9BSY9 194 aa14.82□□□□□ -0.04
USP11-204ENST00000377107 TACC3Q9Y6A5 838 aa14.82□□□□□ -0.04
USP11-204ENST00000377107 TNKSO95271 1327 aa14.82□□□□□ -0.04
USP11-204ENST00000377107 SLU7O95391 586 aaKnown RBP14.82□□□□□ -0.04
USP11-204ENST00000377107 EVCP57679 992 aa14.82□□□□□ -0.04
USP11-204ENST00000377107 RBM6P78332 1123 aaKnown RBP14.82□□□□□ -0.04
USP11-204ENST00000377107 PPARAQ07869 468 aa14.82□□□□□ -0.04
USP11-204ENST00000377107 IFIT1BQ5T764 474 aaKnown RBP14.82□□□□□ -0.04
USP11-204ENST00000377107 FOXP4Q8IVH2 680 aaPredicted RBP14.82□□□□□ -0.04
USP11-204ENST00000377107 FAM217BQ9NTX9 383 aaPredicted RBP14.82□□□□□ -0.04
USP11-204ENST00000377107 CCDC87Q9NVE4 849 aa14.82□□□□□ -0.04
USP11-204ENST00000377107 MRC1P22897 1456 aa14.81□□□□□ -0.04
USP11-204ENST00000377107 CBFA2T2O43439 604 aa14.81□□□□□ -0.04
USP11-204ENST00000377107 CUTAO60888 179 aa14.81□□□□□ -0.04
USP11-204ENST00000377107 PLA2G12BQ9BX93 195 aa14.81□□□□□ -0.04
USP11-204ENST00000377107 NMT2O60551 498 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms