RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 MTFR1Q15390 333 aa7.2□□□□□ -1.26
ZNF440-201ENST00000304060 TJAP1Q5JTD0 557 aa7.2□□□□□ -1.26
ZNF440-201ENST00000304060 IRF6O14896 467 aa7.2□□□□□ -1.26
ZNF440-201ENST00000304060 SKIV2LQ15477 1246 aaKnown RBP7.2□□□□□ -1.26
ZNF440-201ENST00000304060 LMBR1LQ6UX01 489 aa7.2□□□□□ -1.26
ZNF440-201ENST00000304060 DDRGK1Q96HY6 314 aa7.2□□□□□ -1.26
ZNF440-201ENST00000304060 LAMB4A4D0S4 1761 aa7.2□□□□□ -1.26
ZNF440-201ENST00000304060 RPAP1Q9BWH6 1393 aaPredicted RBP7.2□□□□□ -1.26
ZNF440-201ENST00000304060 NEURL1BA8MQ27 555 aa7.19□□□□□ -1.26
ZNF440-201ENST00000304060 CTNND1O60716 968 aaKnown RBP7.19□□□□□ -1.26
ZNF440-201ENST00000304060 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.19□□□□□ -1.26
ZNF440-201ENST00000304060 PROCA1Q8NCQ7 364 aaPredicted RBP7.19□□□□□ -1.26
ZNF440-201ENST00000304060 PRDM6Q9NQX0 595 aa7.19□□□□□ -1.26
ZNF440-201ENST00000304060 CSPP1Q1MSJ5 1256 aa7.19□□□□□ -1.26
ZNF440-201ENST00000304060 GPRC5AQ8NFJ5 357 aa7.19□□□□□ -1.26
ZNF440-201ENST00000304060 JARID2Q92833 1246 aaPredicted RBP7.19□□□□□ -1.26
ZNF440-201ENST00000304060 MXD3Q9BW11 206 aa7.19□□□□□ -1.26
ZNF440-201ENST00000304060 TMEM39BQ9GZU3 492 aa7.19□□□□□ -1.26
ZNF440-201ENST00000304060 R3HDMLQ9H3Y0 253 aa7.19□□□□□ -1.26
ZNF440-201ENST00000304060 AKAP2Q9Y2D5 859 aa7.19□□□□□ -1.26
ZNF440-201ENST00000304060 NUP98P52948 1817 aa7.19□□□□□ -1.26
ZNF440-201ENST00000304060 H7C1W4 665 aa7.19□□□□□ -1.26
ZNF440-201ENST00000304060 VTI1AQ96AJ9 217 aa7.19□□□□□ -1.26
ZNF440-201ENST00000304060 CCDC136Q96JN2 1154 aa7.19□□□□□ -1.26
ZNF440-201ENST00000304060 C19orf81C9J6K1 198 aa7.19□□□□□ -1.26
ZNF440-201ENST00000304060 TAF5LO75529 589 aa7.19□□□□□ -1.26
ZNF440-201ENST00000304060 USP14P54578 494 aa7.19□□□□□ -1.26
ZNF440-201ENST00000304060 PUM3Q15397 648 aaKnown RBP7.19□□□□□ -1.26
ZNF440-201ENST00000304060 NOL9Q5SY16 702 aaKnown RBP7.19□□□□□ -1.26
ZNF440-201ENST00000304060 ZDHHC15Q96MV8 337 aa7.19□□□□□ -1.26
ZNF440-201ENST00000304060 MTMR10Q9NXD2 777 aa7.19□□□□□ -1.26
ZNF440-201ENST00000304060 MAGEA10P43363 369 aaPredicted RBP7.18□□□□□ -1.26
ZNF440-201ENST00000304060 ZBED3Q96IU2 234 aaPredicted RBP7.18□□□□□ -1.26
ZNF440-201ENST00000304060 AGTPBP1Q9UPW5 1226 aa7.18□□□□□ -1.26
ZNF440-201ENST00000304060 USP17L5A8MUK1 530 aa7.18□□□□□ -1.26
ZNF440-201ENST00000304060 CYP2B6P20813 491 aa7.18□□□□□ -1.26
ZNF440-201ENST00000304060 FLIIQ13045 1269 aa7.18□□□□□ -1.26
ZNF440-201ENST00000304060 DPP9Q86TI2 863 aa7.18□□□□□ -1.26
ZNF440-201ENST00000304060 ZMYND15Q9H091 742 aa7.18□□□□□ -1.26
ZNF440-201ENST00000304060 OSBPL5Q9H0X9 879 aaPredicted RBP7.18□□□□□ -1.26
ZNF440-201ENST00000304060 SH2D4AQ9H788 454 aa7.18□□□□□ -1.26
ZNF440-201ENST00000304060 MBIPQ9NS73 344 aa7.18□□□□□ -1.26
ZNF440-201ENST00000304060 JAG2Q9Y219 1238 aa7.18□□□□□ -1.26
ZNF440-201ENST00000304060 COL3A1P02461 1466 aaPredicted RBP7.18□□□□□ -1.26
ZNF440-201ENST00000304060 DCDC2CA8MYV0 355 aa7.18□□□□□ -1.26
ZNF440-201ENST00000304060 GRM8O00222 908 aa7.18□□□□□ -1.26
ZNF440-201ENST00000304060 RAG1P15918 1043 aa7.18□□□□□ -1.26
ZNF440-201ENST00000304060 TCP10Q12799 353 aa7.18□□□□□ -1.26
ZNF440-201ENST00000304060 RAB30Q15771 203 aa7.18□□□□□ -1.26
ZNF440-201ENST00000304060 MS4A4AQ96JQ5 239 aa7.18□□□□□ -1.26
ZNF440-201ENST00000304060 ASNSP08243 561 aa7.17□□□□□ -1.26
ZNF440-201ENST00000304060 MIGA2Q7L4E1 593 aa7.17□□□□□ -1.26
ZNF440-201ENST00000304060 FAM50BQ9Y247 325 aa7.17□□□□□ -1.26
ZNF440-201ENST00000304060 ATP11BQ9Y2G3 1177 aa7.17□□□□□ -1.26
ZNF440-201ENST00000304060 TRIM75PA6NK02 468 aa7.17□□□□□ -1.26
ZNF440-201ENST00000304060 CCER2I3L3R5 266 aa7.17□□□□□ -1.26
ZNF440-201ENST00000304060 ELNP15502 786 aa7.17□□□□□ -1.26
ZNF440-201ENST00000304060 COPB2P35606 906 aa7.17□□□□□ -1.26
ZNF440-201ENST00000304060 PLEKHH3Q7Z736 793 aa7.17□□□□□ -1.26
ZNF440-201ENST00000304060 ZKSCAN4Q969J2 545 aaPredicted RBP7.17□□□□□ -1.26
ZNF440-201ENST00000304060 FBXO3Q9UK99 471 aa7.17□□□□□ -1.26
ZNF440-201ENST00000304060 SNCAIPQ9Y6H5 919 aa7.17□□□□□ -1.26
ZNF440-201ENST00000304060 TNFRSF10AO00220 468 aa7.17□□□□□ -1.26
ZNF440-201ENST00000304060 MVPQ14764 893 aaKnown RBP7.17□□□□□ -1.26
ZNF440-201ENST00000304060 ANKRD13CQ8N6S4 541 aa7.17□□□□□ -1.26
ZNF440-201ENST00000304060 RNPC3Q96LT9 517 aaKnown RBP7.17□□□□□ -1.26
ZNF440-201ENST00000304060 PHAXQ9H814 394 aaKnown RBP7.17□□□□□ -1.26
ZNF440-201ENST00000304060 SPINK5Q9NQ38 1064 aaPredicted RBP7.17□□□□□ -1.26
ZNF440-201ENST00000304060 THEGQ9P2T0 379 aa7.17□□□□□ -1.26
ZNF440-201ENST00000304060 NOP58Q9Y2X3 529 aaKnown RBP7.17□□□□□ -1.26
ZNF440-201ENST00000304060 SYN1P17600 705 aa7.16□□□□□ -1.26
ZNF440-201ENST00000304060 CCDC27Q2M243 656 aa7.16□□□□□ -1.26
ZNF440-201ENST00000304060 PAGR1Q9BTK6 254 aa7.16□□□□□ -1.26
ZNF440-201ENST00000304060 ABCF2Q9UG63 623 aa7.16□□□□□ -1.26
ZNF440-201ENST00000304060 PRKAR2AP13861 404 aaKnown RBP7.16□□□□□ -1.26
ZNF440-201ENST00000304060 OS9Q13438 667 aaPredicted RBP7.16□□□□□ -1.26
ZNF440-201ENST00000304060 ZNF280CQ8ND82 737 aa7.16□□□□□ -1.26
ZNF440-201ENST00000304060 LPIN2Q92539 896 aa7.16□□□□□ -1.26
ZNF440-201ENST00000304060 CRBNQ96SW2 442 aa7.16□□□□□ -1.26
ZNF440-201ENST00000304060 PTPN18Q99952 460 aa7.16□□□□□ -1.26
ZNF440-201ENST00000304060 DHX36Q9H2U1 1008 aaKnown RBP7.16□□□□□ -1.26
ZNF440-201ENST00000304060 COL4A5P29400 1685 aa7.16□□□□□ -1.26
ZNF440-201ENST00000304060 RNF180Q86T96 592 aa7.16□□□□□ -1.26
ZNF440-201ENST00000304060 PLEKHF1Q96S99 279 aa7.16□□□□□ -1.26
ZNF440-201ENST00000304060 APBA2Q99767 749 aa7.16□□□□□ -1.26
ZNF440-201ENST00000304060 GDF15Q99988 308 aa7.16□□□□□ -1.26
ZNF440-201ENST00000304060 RAI14Q9P0K7 980 aa7.16□□□□□ -1.26
ZNF440-201ENST00000304060 KIF28PB7ZC32 967 aa7.16□□□□□ -1.26
ZNF440-201ENST00000304060 GYG1P46976 350 aa7.16□□□□□ -1.26
ZNF440-201ENST00000304060 CWF19L2Q2TBE0 894 aaKnown RBP7.16□□□□□ -1.26
ZNF440-201ENST00000304060 SENP6Q9GZR1 1112 aaPredicted RBP7.16□□□□□ -1.26
ZNF440-201ENST00000304060 HERC5Q9UII4 1024 aaKnown RBP7.16□□□□□ -1.26
ZNF440-201ENST00000304060 APAF1O14727 1248 aa7.15□□□□□ -1.26
ZNF440-201ENST00000304060 SMAD3P84022 425 aaKnown RBP7.15□□□□□ -1.26
ZNF440-201ENST00000304060 MDM2Q00987 491 aaPredicted RBP7.15□□□□□ -1.26
ZNF440-201ENST00000304060 EDC3Q96F86 508 aaKnown RBP7.15□□□□□ -1.26
ZNF440-201ENST00000304060 LRCH3Q96II8 777 aa7.15□□□□□ -1.26
ZNF440-201ENST00000304060 TACC3Q9Y6A5 838 aa7.15□□□□□ -1.26
ZNF440-201ENST00000304060 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.15□□□□□ -1.26
ZNF440-201ENST00000304060 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms