RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 OTOFQ9HC10 1997 aa22.39■■□□□ 1.18
TMEM88-201ENST00000301599 NPM3O75607 178 aaKnown RBP22.39■■□□□ 1.17
TMEM88-201ENST00000301599 NOL9Q5SY16 702 aaKnown RBP22.39■■□□□ 1.17
TMEM88-201ENST00000301599 CEP85Q6P2H3 762 aa22.39■■□□□ 1.17
TMEM88-201ENST00000301599 ZNF384Q8TF68 577 aa22.39■■□□□ 1.17
TMEM88-201ENST00000301599 ZNF512BQ96KM6 892 aaPredicted RBP22.39■■□□□ 1.17
TMEM88-201ENST00000301599 MYH2Q9UKX2 1941 aa22.38■■□□□ 1.17
TMEM88-201ENST00000301599 RHBDL3P58872 404 aa22.38■■□□□ 1.17
TMEM88-201ENST00000301599 MAP3K10Q02779 954 aa22.38■■□□□ 1.17
TMEM88-201ENST00000301599 PICALMQ13492 652 aa22.38■■□□□ 1.17
TMEM88-201ENST00000301599 ARHGEF6Q15052 776 aa22.38■■□□□ 1.17
TMEM88-201ENST00000301599 SNRKQ9NRH2 765 aa22.38■■□□□ 1.17
TMEM88-201ENST00000301599 LAMB1P07942 1786 aa22.38■■□□□ 1.17
TMEM88-201ENST00000301599 AK9Q5TCS8 1911 aa22.37■■□□□ 1.17
TMEM88-201ENST00000301599 DDTLA6NHG4 134 aaPredicted RBP22.37■■□□□ 1.17
TMEM88-201ENST00000301599 BTBD19C9JJ37 291 aa22.37■■□□□ 1.17
TMEM88-201ENST00000301599 SH3BP5LQ7L8J4 393 aa22.37■■□□□ 1.17
TMEM88-201ENST00000301599 OTOP1Q7RTM1 612 aa22.37■■□□□ 1.17
TMEM88-201ENST00000301599 CD99L2Q8TCZ2 262 aa22.37■■□□□ 1.17
TMEM88-201ENST00000301599 DDX4Q9NQI0 724 aaKnown RBP22.37■■□□□ 1.17
TMEM88-201ENST00000301599 PHF20L1A8MW92 1017 aa22.36■■□□□ 1.17
TMEM88-201ENST00000301599 IGSF3O75054 1194 aa22.36■■□□□ 1.17
TMEM88-201ENST00000301599 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.36■■□□□ 1.17
TMEM88-201ENST00000301599 NOL10Q9BSC4 688 aaKnown RBP22.36■■□□□ 1.17
TMEM88-201ENST00000301599 EFCC1Q9HA90 598 aa22.36■■□□□ 1.17
TMEM88-201ENST00000301599 KCNH4Q9UQ05 1017 aa22.36■■□□□ 1.17
TMEM88-201ENST00000301599 SOX10P56693 466 aa22.35■■□□□ 1.17
TMEM88-201ENST00000301599 HSP90AB4PQ58FF6 505 aa22.35■■□□□ 1.17
TMEM88-201ENST00000301599 ERC1Q8IUD2 1116 aa22.35■■□□□ 1.17
TMEM88-201ENST00000301599 EAF2Q96CJ1 260 aaPredicted RBP22.35■■□□□ 1.17
TMEM88-201ENST00000301599 CCDC8Q9H0W5 538 aaPredicted RBP22.35■■□□□ 1.17
TMEM88-201ENST00000301599 PICK1Q9NRD5 415 aa22.35■■□□□ 1.17
TMEM88-201ENST00000301599 CXCL11O14625 94 aa22.34■■□□□ 1.17
TMEM88-201ENST00000301599 TBC1D12O60347 775 aa22.34■■□□□ 1.17
TMEM88-201ENST00000301599 TLR2O60603 784 aa22.34■■□□□ 1.17
TMEM88-201ENST00000301599 BAG3O95817 575 aa22.34■■□□□ 1.17
TMEM88-201ENST00000301599 NAA16Q6N069 864 aaPredicted RBP22.34■■□□□ 1.17
TMEM88-201ENST00000301599 ANKRD23Q86SG2 305 aa22.34■■□□□ 1.17
TMEM88-201ENST00000301599 RPAP2Q8IXW5 612 aaPredicted RBP22.34■■□□□ 1.17
TMEM88-201ENST00000301599 SCYL3Q8IZE3 742 aa22.34■■□□□ 1.17
TMEM88-201ENST00000301599 CHMP4BQ9H444 224 aaKnown RBP22.34■■□□□ 1.17
TMEM88-201ENST00000301599 DBNLQ9UJU6 430 aaKnown RBP22.34■■□□□ 1.17
TMEM88-201ENST00000301599 RCAN3Q9UKA8 241 aa22.34■■□□□ 1.17
TMEM88-201ENST00000301599 DDX19BQ9UMR2 479 aa22.34■■□□□ 1.17
TMEM88-201ENST00000301599 PTPN22Q9Y2R2 807 aa22.34■■□□□ 1.17
TMEM88-201ENST00000301599 RFX7Q2KHR2 1363 aa22.34■■□□□ 1.17
TMEM88-201ENST00000301599 CTNND1O60716 968 aaKnown RBP22.33■■□□□ 1.17
TMEM88-201ENST00000301599 CYP2E1P05181 493 aaPredicted RBP22.33■■□□□ 1.17
TMEM88-201ENST00000301599 ZHX2Q9Y6X8 837 aa22.33■■□□□ 1.17
TMEM88-201ENST00000301599 ATRNL1Q5VV63 1379 aa22.33■■□□□ 1.17
TMEM88-201ENST00000301599 PLCG2P16885 1265 aa22.32■■□□□ 1.16
TMEM88-201ENST00000301599 ZAP70P43403 619 aa22.32■■□□□ 1.16
TMEM88-201ENST00000301599 TEX11Q8IYF3 940 aa22.32■■□□□ 1.16
TMEM88-201ENST00000301599 EXOC6BQ9Y2D4 811 aa22.32■■□□□ 1.16
TMEM88-201ENST00000301599 PTPRAP18433 802 aa22.31■■□□□ 1.16
TMEM88-201ENST00000301599 PPP4CP60510 307 aa22.31■■□□□ 1.16
TMEM88-201ENST00000301599 KIF22Q14807 665 aa22.31■■□□□ 1.16
TMEM88-201ENST00000301599 TLR7Q9NYK1 1049 aaKnown RBP22.31■■□□□ 1.16
TMEM88-201ENST00000301599 COG6Q9Y2V7 657 aa22.31■■□□□ 1.16
TMEM88-201ENST00000301599 PDHXO00330 501 aa22.3■■□□□ 1.16
TMEM88-201ENST00000301599 HMMRO75330 724 aa22.3■■□□□ 1.16
TMEM88-201ENST00000301599 SH3RF3Q8TEJ3 882 aaPredicted RBP22.3■■□□□ 1.16
TMEM88-201ENST00000301599 OSBPL5Q9H0X9 879 aaPredicted RBP22.3■■□□□ 1.16
TMEM88-201ENST00000301599 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.3■■□□□ 1.16
TMEM88-201ENST00000301599 ZBTB40Q9NUA8 1239 aa22.3■■□□□ 1.16
TMEM88-201ENST00000301599 AATFQ9NY61 560 aaKnown RBP eCLIP22.3■■□□□ 1.16
TMEM88-201ENST00000301599 MOGSQ13724 837 aa22.29■■□□□ 1.16
TMEM88-201ENST00000301599 FASTKD5Q7L8L6 764 aaKnown RBP22.29■■□□□ 1.16
TMEM88-201ENST00000301599 AACSQ86V21 672 aa22.29■■□□□ 1.16
TMEM88-201ENST00000301599 AFG3L2Q9Y4W6 797 aa22.29■■□□□ 1.16
TMEM88-201ENST00000301599 SLURP2P0DP57 97 aa22.28■■□□□ 1.16
TMEM88-201ENST00000301599 RHPN1Q8TCX5 695 aa22.28■■□□□ 1.16
TMEM88-201ENST00000301599 DHX36Q9H2U1 1008 aaKnown RBP22.28■■□□□ 1.16
TMEM88-201ENST00000301599 PIH1D3Q9NQM4 214 aaKnown RBP22.28■■□□□ 1.16
TMEM88-201ENST00000301599 CAP1Q01518 475 aa22.27■■□□□ 1.16
TMEM88-201ENST00000301599 C17orf99Q6UX52 265 aa22.27■■□□□ 1.16
TMEM88-201ENST00000301599 PI4KBQ9UBF8 816 aa22.27■■□□□ 1.16
TMEM88-201ENST00000301599 A0A0G2JLL6 359 aaPredicted RBP22.26■■□□□ 1.15
TMEM88-201ENST00000301599 GNRH1P01148 92 aa22.26■■□□□ 1.15
TMEM88-201ENST00000301599 CYP7A1P22680 504 aa22.26■■□□□ 1.15
TMEM88-201ENST00000301599 LACTBP83111 547 aaPredicted RBP22.26■■□□□ 1.15
TMEM88-201ENST00000301599 GPAT2Q6NUI2 795 aa22.26■■□□□ 1.15
TMEM88-201ENST00000301599 PRRT2Q7Z6L0 340 aaPredicted RBP22.26■■□□□ 1.15
TMEM88-201ENST00000301599 CLASRPQ8N2M8 674 aaKnown RBP22.26■■□□□ 1.15
TMEM88-201ENST00000301599 TGFBRAP1Q8WUH2 860 aa22.26■■□□□ 1.15
TMEM88-201ENST00000301599 KIF1BPQ96EK5 621 aa22.26■■□□□ 1.15
TMEM88-201ENST00000301599 IL1RAPL2Q9NP60 686 aa22.26■■□□□ 1.15
TMEM88-201ENST00000301599 HERC5Q9UII4 1024 aaKnown RBP22.26■■□□□ 1.15
TMEM88-201ENST00000301599 IDH1O75874 414 aaKnown RBP22.25■■□□□ 1.15
TMEM88-201ENST00000301599 PDE3AQ14432 1141 aa22.25■■□□□ 1.15
TMEM88-201ENST00000301599 TMED8Q6PL24 325 aaPredicted RBP22.25■■□□□ 1.15
TMEM88-201ENST00000301599 ADGRA1Q86SQ6 560 aa22.25■■□□□ 1.15
TMEM88-201ENST00000301599 FOXP4Q8IVH2 680 aaPredicted RBP22.25■■□□□ 1.15
TMEM88-201ENST00000301599 CPA4Q9UI42 421 aa22.25■■□□□ 1.15
TMEM88-201ENST00000301599 COL2A1P02458 1487 aaPredicted RBP22.25■■□□□ 1.15
TMEM88-201ENST00000301599 RAB11FIP3O75154 756 aa22.24■■□□□ 1.15
TMEM88-201ENST00000301599 CENPBP07199 599 aaPredicted RBP22.24■■□□□ 1.15
TMEM88-201ENST00000301599 MAP3K12Q12852 859 aa22.24■■□□□ 1.15
TMEM88-201ENST00000301599 NBPF11Q86T75 865 aa22.24■■□□□ 1.15
TMEM88-201ENST00000301599 SIRT2Q8IXJ6 389 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms