RNA–Protein interactions for RNA: ENST00000299518.6

IDH3A-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH3A, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-201ENST00000299518 ZNF202O95125 648 aa12.96□□□□□ -0.33
IDH3A-201ENST00000299518 PFKFB1P16118 471 aa12.96□□□□□ -0.33
IDH3A-201ENST00000299518 SHISA4Q96DD7 197 aa12.96□□□□□ -0.33
IDH3A-201ENST00000299518 USP27XA6NNY8 438 aa12.96□□□□□ -0.34
IDH3A-201ENST00000299518 IARSP41252 1262 aaKnown RBP12.96□□□□□ -0.34
IDH3A-201ENST00000299518 AKNAD1Q5T1N1 836 aa12.96□□□□□ -0.34
IDH3A-201ENST00000299518 PLA2G4DQ86XP0 818 aa12.96□□□□□ -0.34
IDH3A-201ENST00000299518 BCL2L12Q9HB09 334 aa12.96□□□□□ -0.34
IDH3A-201ENST00000299518 BECN2A8MW95 431 aa12.95□□□□□ -0.34
IDH3A-201ENST00000299518 ADALQ6DHV7 355 aa12.95□□□□□ -0.34
IDH3A-201ENST00000299518 TDRD7Q8NHU6 1098 aaKnown RBP12.95□□□□□ -0.34
IDH3A-201ENST00000299518 SPATA31A5Q5VU36 1347 aa12.95□□□□□ -0.34
IDH3A-201ENST00000299518 SPATA31A7Q8IWB4 1347 aa12.95□□□□□ -0.34
IDH3A-201ENST00000299518 GOLGA6L19H0YKK7 550 aa12.95□□□□□ -0.34
IDH3A-201ENST00000299518 PNOCQ13519 176 aa12.95□□□□□ -0.34
IDH3A-201ENST00000299518 SHC4Q6S5L8 630 aa12.95□□□□□ -0.34
IDH3A-201ENST00000299518 MTMR7Q9Y216 660 aa12.95□□□□□ -0.34
IDH3A-201ENST00000299518 CCDC69A6NI79 296 aa12.95□□□□□ -0.34
IDH3A-201ENST00000299518 DHX16O60231 1041 aaKnown RBP12.95□□□□□ -0.34
IDH3A-201ENST00000299518 VEGFAP15692 232 aaPredicted RBP12.95□□□□□ -0.34
IDH3A-201ENST00000299518 GRAMD1CQ8IYS0 662 aa12.95□□□□□ -0.34
IDH3A-201ENST00000299518 ZNF512BQ96KM6 892 aaPredicted RBP12.95□□□□□ -0.34
IDH3A-201ENST00000299518 MINPP1Q9UNW1 487 aa12.95□□□□□ -0.34
IDH3A-201ENST00000299518 NGLY1Q96IV0 654 aa12.94□□□□□ -0.34
IDH3A-201ENST00000299518 C4AP0C0L4 1744 aa12.94□□□□□ -0.34
IDH3A-201ENST00000299518 C4BP0C0L5 1744 aa12.94□□□□□ -0.34
IDH3A-201ENST00000299518 DDX60Q8IY21 1712 aaKnown RBP12.94□□□□□ -0.34
IDH3A-201ENST00000299518 CYP2D6P10635 497 aa12.94□□□□□ -0.34
IDH3A-201ENST00000299518 USP49Q70CQ1 688 aa12.94□□□□□ -0.34
IDH3A-201ENST00000299518 FBXL16Q8N461 479 aa12.94□□□□□ -0.34
IDH3A-201ENST00000299518 PDILTQ8N807 584 aa12.94□□□□□ -0.34
IDH3A-201ENST00000299518 WNT7AO00755 349 aa12.94□□□□□ -0.34
IDH3A-201ENST00000299518 ADAMTS3O15072 1205 aa12.94□□□□□ -0.34
IDH3A-201ENST00000299518 PDIA4P13667 645 aaKnown RBP12.94□□□□□ -0.34
IDH3A-201ENST00000299518 PRDX5P30044 214 aa12.94□□□□□ -0.34
IDH3A-201ENST00000299518 GOLGA8FQ08AF8 430 aa12.94□□□□□ -0.34
IDH3A-201ENST00000299518 GOLGA8DPQ0D2H9 430 aa12.94□□□□□ -0.34
IDH3A-201ENST00000299518 STX1AQ16623 288 aa12.94□□□□□ -0.34
IDH3A-201ENST00000299518 ATP1A3P13637 1013 aa12.94□□□□□ -0.34
IDH3A-201ENST00000299518 EARS2Q5JPH6 523 aaKnown RBP12.94□□□□□ -0.34
IDH3A-201ENST00000299518 FAM47AQ5JRC9 791 aa12.94□□□□□ -0.34
IDH3A-201ENST00000299518 ANKRD18AQ8IVF6 992 aa12.94□□□□□ -0.34
IDH3A-201ENST00000299518 FAM84BQ96KN1 310 aaPredicted RBP12.94□□□□□ -0.34
IDH3A-201ENST00000299518 TRMT1Q9NXH9 659 aaKnown RBP12.94□□□□□ -0.34
IDH3A-201ENST00000299518 AATFQ9NY61 560 aaKnown RBP eCLIP12.94□□□□□ -0.34
IDH3A-201ENST00000299518 MYH13Q9UKX3 1938 aa12.93□□□□□ -0.34
IDH3A-201ENST00000299518 NAA30Q147X3 362 aaPredicted RBP12.93□□□□□ -0.34
IDH3A-201ENST00000299518 GNPATO15228 680 aa12.93□□□□□ -0.34
IDH3A-201ENST00000299518 LMOD1P29536 600 aaPredicted RBP12.93□□□□□ -0.34
IDH3A-201ENST00000299518 PPARAQ07869 468 aa12.93□□□□□ -0.34
IDH3A-201ENST00000299518 POLR3EQ9NVU0 708 aa12.93□□□□□ -0.34
IDH3A-201ENST00000299518 PLCH1Q4KWH8 1693 aa12.93□□□□□ -0.34
IDH3A-201ENST00000299518 TOB1P50616 345 aaPredicted RBP12.93□□□□□ -0.34
IDH3A-201ENST00000299518 ZNF827Q17R98 1081 aa12.93□□□□□ -0.34
IDH3A-201ENST00000299518 FOXP4Q8IVH2 680 aaPredicted RBP12.93□□□□□ -0.34
IDH3A-201ENST00000299518 KIAA1468Q9P260 1216 aa12.93□□□□□ -0.34
IDH3A-201ENST00000299518 CASP1P29466 404 aa12.92□□□□□ -0.34
IDH3A-201ENST00000299518 WTAPQ15007 396 aa12.92□□□□□ -0.34
IDH3A-201ENST00000299518 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.92□□□□□ -0.34
IDH3A-201ENST00000299518 VPS54Q9P1Q0 977 aa12.92□□□□□ -0.34
IDH3A-201ENST00000299518 CHD4Q14839 1912 aa12.92□□□□□ -0.34
IDH3A-201ENST00000299518 ATRNO75882 1429 aa12.92□□□□□ -0.34
IDH3A-201ENST00000299518 PLEKHA8P1O95397 391 aa12.92□□□□□ -0.34
IDH3A-201ENST00000299518 TPM2P07951 284 aa12.92□□□□□ -0.34
IDH3A-201ENST00000299518 PTPAQ15257 358 aa12.92□□□□□ -0.34
IDH3A-201ENST00000299518 LONRF3Q496Y0 759 aa12.92□□□□□ -0.34
IDH3A-201ENST00000299518 PCDHB6Q9Y5E3 794 aa12.92□□□□□ -0.34
IDH3A-201ENST00000299518 GRIK5Q16478 980 aa12.92□□□□□ -0.34
IDH3A-201ENST00000299518 TNKSO95271 1327 aa12.91□□□□□ -0.34
IDH3A-201ENST00000299518 MAGEB6P1A0A0J9YX57 407 aa12.91□□□□□ -0.34
IDH3A-201ENST00000299518 SLC3A2P08195 630 aaKnown RBP12.91□□□□□ -0.34
IDH3A-201ENST00000299518 PARP10Q53GL7 1025 aa12.91□□□□□ -0.34
IDH3A-201ENST00000299518 DIS3L2Q8IYB7 885 aaKnown RBP12.91□□□□□ -0.34
IDH3A-201ENST00000299518 ZNF592Q92610 1267 aa12.91□□□□□ -0.34
IDH3A-201ENST00000299518 MAP3K14Q99558 947 aa12.91□□□□□ -0.34
IDH3A-201ENST00000299518 NPHP1O15259 732 aa12.91□□□□□ -0.34
IDH3A-201ENST00000299518 SSRP1Q08945 709 aaKnown RBP12.91□□□□□ -0.34
IDH3A-201ENST00000299518 SLC39A14Q15043 492 aa12.91□□□□□ -0.34
IDH3A-201ENST00000299518 ECM29Q5VYK3 1845 aa12.91□□□□□ -0.34
IDH3A-201ENST00000299518 USP17L12C9JPN9 530 aa12.91□□□□□ -0.34
IDH3A-201ENST00000299518 USP17L21D6R901 530 aa12.91□□□□□ -0.34
IDH3A-201ENST00000299518 COBLO75128 1261 aa12.91□□□□□ -0.34
IDH3A-201ENST00000299518 RTN1Q16799 776 aa12.91□□□□□ -0.34
IDH3A-201ENST00000299518 KCNG4Q8TDN1 519 aa12.91□□□□□ -0.34
IDH3A-201ENST00000299518 PHLPP1O60346 1717 aa12.91□□□□□ -0.34
IDH3A-201ENST00000299518 RASGRP2Q7LDG7 609 aa12.9□□□□□ -0.34
IDH3A-201ENST00000299518 ZNF654Q8IZM8 581 aa12.9□□□□□ -0.34
IDH3A-201ENST00000299518 TMEM87BQ96K49 555 aa12.9□□□□□ -0.34
IDH3A-201ENST00000299518 RIOK1Q9BRS2 568 aaKnown RBP12.9□□□□□ -0.34
IDH3A-201ENST00000299518 SMC2O95347 1197 aa12.9□□□□□ -0.34
IDH3A-201ENST00000299518 SYKP43405 635 aa12.9□□□□□ -0.34
IDH3A-201ENST00000299518 NBPF11Q86T75 865 aa12.9□□□□□ -0.34
IDH3A-201ENST00000299518 ENAHQ8N8S7 591 aaPredicted RBP12.9□□□□□ -0.34
IDH3A-201ENST00000299518 CABP5Q9NP86 173 aa12.9□□□□□ -0.34
IDH3A-201ENST00000299518 SPTLC3Q9NUV7 552 aa12.9□□□□□ -0.34
IDH3A-201ENST00000299518 IFNKQ9P0W0 207 aa12.9□□□□□ -0.34
IDH3A-201ENST00000299518 RIOK3O14730 519 aaKnown RBP12.9□□□□□ -0.34
IDH3A-201ENST00000299518 SGMS1Q86VZ5 419 aa12.9□□□□□ -0.34
IDH3A-201ENST00000299518 NBPF5PQ86XG9 351 aaPredicted RBP12.9□□□□□ -0.34
IDH3A-201ENST00000299518 DPF2Q92785 391 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms