RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 I3L4J1 428 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 SLC8A1P32418 973 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 RAB3IPQ96QF0 476 aaPredicted RBP16.56■□□□□ 0.24
SCN3B-201ENST00000299333 PLCB1Q9NQ66 1216 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 KRT5P13647 590 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 CALML3P27482 149 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 RASSF2P50749 326 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 ITIH3Q06033 890 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 MTMR3Q13615 1198 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 RASIP1Q5U651 963 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 PHLDB3Q6NSJ2 640 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 TMEM87AQ8NBN3 555 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 PRPF31Q8WWY3 499 aaKnown RBP16.56■□□□□ 0.24
SCN3B-201ENST00000299333 SLF1Q9BQI6 1058 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 CUL7Q14999 1698 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 RNF40O75150 1001 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 TNNI2P48788 182 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 SLC9C2Q5TAH2 1124 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 BCAS4Q8TDM0 211 aa16.56■□□□□ 0.24
SCN3B-201ENST00000299333 DDX41Q9UJV9 622 aaKnown RBP16.56■□□□□ 0.24
SCN3B-201ENST00000299333 IL16Q14005 1332 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 SYNRGQ9UMZ2 1314 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 GADD45BO75293 160 aaPredicted RBP16.55■□□□□ 0.24
SCN3B-201ENST00000299333 GUCY2FP51841 1108 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 ATP8B2P98198 1209 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 ZNF174Q15697 407 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 CXorf38Q8TB03 319 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 VEZTQ9HBM0 779 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 RPSAP08865 295 aaKnown RBP16.55■□□□□ 0.24
SCN3B-201ENST00000299333 BRD3Q15059 726 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 ASIC2Q16515 512 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 UBL4BQ8N7F7 174 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 CDK13Q14004 1512 aaKnown RBP16.55■□□□□ 0.24
SCN3B-201ENST00000299333 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.55■□□□□ 0.24
SCN3B-201ENST00000299333 BAG2O95816 211 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 SNCBQ16143 134 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 VWA3BQ502W6 1294 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 FAM173BQ6P4H8 233 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 TMTC1Q8IUR5 882 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 GOLGA5Q8TBA6 731 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 C6orf229H3BNL8 230 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 CLTAP09496 248 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 POLD1P28340 1107 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 DMTNQ08495 405 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 ATL3Q6DD88 541 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 DHX32Q7L7V1 743 aaKnown RBP16.55■□□□□ 0.24
SCN3B-201ENST00000299333 WAPLQ7Z5K2 1190 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 MSANTD4Q8NCY6 345 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 SMARCC2Q8TAQ2 1214 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 RILPQ96NA2 401 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 CAPS2Q9BXY5 557 aa16.55■□□□□ 0.24
SCN3B-201ENST00000299333 RPGRQ92834 1020 aaKnown RBP16.54■□□□□ 0.24
SCN3B-201ENST00000299333 TRPC3Q13507 836 aa16.54■□□□□ 0.24
SCN3B-201ENST00000299333 CFAP221Q4G0U5 840 aa16.54■□□□□ 0.24
SCN3B-201ENST00000299333 HDAC9Q9UKV0 1011 aa16.54■□□□□ 0.24
SCN3B-201ENST00000299333 IQSEC3Q9UPP2 1182 aaPredicted RBP16.54■□□□□ 0.24
SCN3B-201ENST00000299333 ATICP31939 592 aa16.54■□□□□ 0.24
SCN3B-201ENST00000299333 KRT9P35527 623 aa16.54■□□□□ 0.24
SCN3B-201ENST00000299333 BIRC2Q13490 618 aa16.54■□□□□ 0.24
SCN3B-201ENST00000299333 DENND2CQ68D51 928 aa16.54■□□□□ 0.24
SCN3B-201ENST00000299333 RPRD2Q5VT52 1461 aaKnown RBP16.54■□□□□ 0.24
SCN3B-201ENST00000299333 STX2P32856 288 aa16.54■□□□□ 0.24
SCN3B-201ENST00000299333 PAG1Q9NWQ8 432 aa16.54■□□□□ 0.24
SCN3B-201ENST00000299333 KCNH3Q9ULD8 1083 aa16.54■□□□□ 0.24
SCN3B-201ENST00000299333 ARHGAP42A6NI28 874 aa16.54■□□□□ 0.24
SCN3B-201ENST00000299333 PDE4DQ08499 809 aa16.54■□□□□ 0.24
SCN3B-201ENST00000299333 SLC9C1Q4G0N8 1177 aa16.54■□□□□ 0.24
SCN3B-201ENST00000299333 RPL13P26373 211 aaKnown RBP16.53■□□□□ 0.24
SCN3B-201ENST00000299333 CHMLP26374 656 aa16.53■□□□□ 0.24
SCN3B-201ENST00000299333 CTNNA1P35221 906 aaKnown RBP16.53■□□□□ 0.24
SCN3B-201ENST00000299333 CDC5LQ99459 802 aaKnown RBP16.53■□□□□ 0.24
SCN3B-201ENST00000299333 PA2G4Q9UQ80 394 aaKnown RBP16.53■□□□□ 0.24
SCN3B-201ENST00000299333 ABCC5O15440 1437 aa16.53■□□□□ 0.24
SCN3B-201ENST00000299333 GAS8O95995 478 aa16.53■□□□□ 0.24
SCN3B-201ENST00000299333 SV2BQ7L1I2 683 aa16.53■□□□□ 0.24
SCN3B-201ENST00000299333 PLEKHM2Q8IWE5 1019 aa16.53■□□□□ 0.24
SCN3B-201ENST00000299333 PDCD7Q8N8D1 485 aaKnown RBP16.53■□□□□ 0.24
SCN3B-201ENST00000299333 MGEA5O60502 916 aa16.53■□□□□ 0.24
SCN3B-201ENST00000299333 VCX3AQ9NNX9 186 aa16.53■□□□□ 0.24
SCN3B-201ENST00000299333 RTL9Q8NET4 1388 aa16.53■□□□□ 0.24
SCN3B-201ENST00000299333 LRRD1A4D1F6 860 aa16.53■□□□□ 0.24
SCN3B-201ENST00000299333 RNF8O76064 485 aa16.53■□□□□ 0.24
SCN3B-201ENST00000299333 MAGEA1P43355 309 aa16.53■□□□□ 0.24
SCN3B-201ENST00000299333 KLHL14Q9P2G3 628 aa16.53■□□□□ 0.24
SCN3B-201ENST00000299333 EPB41P11171 864 aaKnown RBP16.52■□□□□ 0.24
SCN3B-201ENST00000299333 MRPL50Q8N5N7 158 aaKnown RBP16.52■□□□□ 0.24
SCN3B-201ENST00000299333 CSGALNACT2Q8N6G5 542 aa16.52■□□□□ 0.24
SCN3B-201ENST00000299333 KIFC2Q96AC6 838 aa16.52■□□□□ 0.24
SCN3B-201ENST00000299333 TAB2Q9NYJ8 693 aa16.52■□□□□ 0.24
SCN3B-201ENST00000299333 ZNF215Q9UL58 517 aaPredicted RBP16.52■□□□□ 0.24
SCN3B-201ENST00000299333 NSD2O96028 1365 aa16.52■□□□□ 0.24
SCN3B-201ENST00000299333 RGS16O15492 202 aaPredicted RBP16.52■□□□□ 0.24
SCN3B-201ENST00000299333 ZNF219Q9P2Y4 722 aaPredicted RBP16.52■□□□□ 0.24
SCN3B-201ENST00000299333 NLRP12P59046 1061 aa16.52■□□□□ 0.24
SCN3B-201ENST00000299333 KLHDC4Q8TBB5 520 aa16.52■□□□□ 0.24
SCN3B-201ENST00000299333 SEPT10Q9P0V9 454 aa16.52■□□□□ 0.24
SCN3B-201ENST00000299333 GOLGA8KD6RF30 607 aa16.52■□□□□ 0.23
SCN3B-201ENST00000299333 SPECC1L-ADORA2AF8WAN1 911 aa16.52■□□□□ 0.23
SCN3B-201ENST00000299333 LUC7L3O95232 432 aaKnown RBP16.52■□□□□ 0.23
SCN3B-201ENST00000299333 TTC19Q6DKK2 380 aaPredicted RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms