RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 FAM83GA6ND36 823 aa6.21□□□□□ -1.42
CPSF2-201ENST00000298875 HDAC1Q13547 482 aaPredicted RBP6.21□□□□□ -1.42
CPSF2-201ENST00000298875 ERCC6LQ2NKX8 1250 aa6.21□□□□□ -1.42
CPSF2-201ENST00000298875 NBPF6Q5VWK0 638 aa6.21□□□□□ -1.42
CPSF2-201ENST00000298875 BRAPQ7Z569 592 aa6.21□□□□□ -1.42
CPSF2-201ENST00000298875 NBPF5PQ86XG9 351 aaPredicted RBP6.21□□□□□ -1.42
CPSF2-201ENST00000298875 NBPF4Q96M43 638 aa6.21□□□□□ -1.42
CPSF2-201ENST00000298875 NUF2Q9BZD4 464 aa6.21□□□□□ -1.42
CPSF2-201ENST00000298875 PTPDC1A2A3K4 754 aa6.21□□□□□ -1.42
CPSF2-201ENST00000298875 U2AF2P26368 475 aaKnown RBP eCLIP6.21□□□□□ -1.42
CPSF2-201ENST00000298875 DTHD1Q6ZMT9 781 aa6.21□□□□□ -1.42
CPSF2-201ENST00000298875 RUFY3Q7L099 469 aa6.21□□□□□ -1.42
CPSF2-201ENST00000298875 RABEP2Q9H5N1 569 aa6.21□□□□□ -1.42
CPSF2-201ENST00000298875 MCUR1Q96AQ8 359 aa6.21□□□□□ -1.42
CPSF2-201ENST00000298875 SP4Q02446 784 aa6.21□□□□□ -1.42
CPSF2-201ENST00000298875 C8orf74Q6P047 294 aa6.21□□□□□ -1.42
CPSF2-201ENST00000298875 LEO1Q8WVC0 666 aaPredicted RBP6.21□□□□□ -1.42
CPSF2-201ENST00000298875 NOC4LQ9BVI4 516 aaKnown RBP6.21□□□□□ -1.42
CPSF2-201ENST00000298875 TRAPPC8Q9Y2L5 1435 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 VWA3AA6NCI4 1184 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 NCBP1Q09161 790 aaKnown RBP6.2□□□□□ -1.42
CPSF2-201ENST00000298875 CYP26C1Q6V0L0 522 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 NUCKS1Q9H1E3 243 aaKnown RBP6.2□□□□□ -1.42
CPSF2-201ENST00000298875 RNASE9P60153 205 aaKnown RBP6.2□□□□□ -1.42
CPSF2-201ENST00000298875 TAF12Q16514 161 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 LONRF3Q496Y0 759 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 UBL4BQ8N7F7 174 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 PRPF31Q8WWY3 499 aaKnown RBP6.2□□□□□ -1.42
CPSF2-201ENST00000298875 DDX27Q96GQ7 796 aaKnown RBP6.2□□□□□ -1.42
CPSF2-201ENST00000298875 ANKRD36BQ8N2N9 1353 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 ECM2O94769 699 aaPredicted RBP6.2□□□□□ -1.42
CPSF2-201ENST00000298875 EIF3DO15371 548 aaKnown RBP eCLIP6.2□□□□□ -1.42
CPSF2-201ENST00000298875 TAOK1Q7L7X3 1001 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.2□□□□□ -1.42
CPSF2-201ENST00000298875 HAUS7Q99871 368 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 EIF2AQ9BY44 585 aaKnown RBP6.2□□□□□ -1.42
CPSF2-201ENST00000298875 RNF113AO15541 343 aaKnown RBP6.2□□□□□ -1.42
CPSF2-201ENST00000298875 SPOPO43791 374 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 CCNT1O60563 726 aaKnown RBP6.2□□□□□ -1.42
CPSF2-201ENST00000298875 RFC4P35249 363 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 PDE6BP35913 854 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 IQCDQ96DY2 449 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 CCDC61Q9Y6R9 512 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 NCOA1Q15788 1441 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 GOLGA6CA6NDK9 693 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 EVI5O60447 810 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 GOLGA6DP0CG33 693 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 INPP5BP32019 993 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 CCDC62Q6P9F0 684 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 MIER3Q7Z3K6 550 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 RNF34Q969K3 372 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 GOLGA6AQ9NYA3 693 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 ACTN4O43707 911 aaKnown RBP6.2□□□□□ -1.42
CPSF2-201ENST00000298875 AFAP1L2Q8N4X5 818 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 MIGA1Q8NAN2 632 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 TEX13AQ9BXU3 409 aaPredicted RBP6.2□□□□□ -1.42
CPSF2-201ENST00000298875 TACC3Q9Y6A5 838 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 NOS1P29475 1434 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 PSMD6Q15008 389 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 SLC9C2Q5TAH2 1124 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 ARMC9Q7Z3E5 817 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 TRIM31Q9BZY9 425 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 IL16Q14005 1332 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 IRX5P78411 483 aaPredicted RBP6.2□□□□□ -1.42
CPSF2-201ENST00000298875 GABPAQ06546 454 aa6.2□□□□□ -1.42
CPSF2-201ENST00000298875 LMTK3Q96Q04 1460 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 I3L4J1 428 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 RXRAP19793 462 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 ASIC2Q16515 512 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 ATP2B3Q16720 1220 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 KRT79Q5XKE5 535 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 SDCCAG8Q86SQ7 713 aaPredicted RBP6.19□□□□□ -1.42
CPSF2-201ENST00000298875 CCDC68Q9H2F9 335 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 CALML3P27482 149 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 MYL5Q02045 173 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 MTMR3Q13615 1198 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 ANKRD13DQ6ZTN6 518 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 ERO1AQ96HE7 468 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 TRIM4Q9C037 500 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 AK2P54819 239 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 DYNC1I2Q13409 638 aaKnown RBP6.19□□□□□ -1.42
CPSF2-201ENST00000298875 MAGEB6Q8N7X4 407 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 CSRNP2Q9H175 543 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 A0A1B0GVL5 298 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 NDUFAB1O14561 156 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 CHMP2AO43633 222 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 SEPT2Q15019 361 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 WDR44Q5JSH3 913 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 RASSF2P50749 326 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 PPP2R5CQ13362 524 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 PPP2R5DQ14738 602 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 PLCB1Q9NQ66 1216 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 FAN1Q9Y2M0 1017 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 ABCA8O94911 1581 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 TXNDC9O14530 226 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 CETN3O15182 167 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 DAPK3O43293 454 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 EPB41P11171 864 aaKnown RBP6.19□□□□□ -1.42
CPSF2-201ENST00000298875 ZKSCAN3Q9BRR0 538 aa6.19□□□□□ -1.42
CPSF2-201ENST00000298875 TSPYL2Q9H2G4 693 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms