RNA–Protein interactions for RNA: ENST00000265343.9

AFF4-201, Transcript of AF4/FMR2 family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFF4, Length 9,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-201ENST00000265343 RUNDC3BQ96NL0 473 aa16.64■□□□□ 0.25
AFF4-201ENST00000265343 RRAGDQ9NQL2 400 aaPredicted RBP16.64■□□□□ 0.25
AFF4-201ENST00000265343 KRT3P12035 628 aa16.64■□□□□ 0.25
AFF4-201ENST00000265343 ZC3H15Q8WU90 426 aaKnown RBP16.64■□□□□ 0.25
AFF4-201ENST00000265343 BRF1Q92994 677 aa16.64■□□□□ 0.25
AFF4-201ENST00000265343 SUN1O94901 812 aa16.64■□□□□ 0.25
AFF4-201ENST00000265343 CDC5LQ99459 802 aaKnown RBP16.64■□□□□ 0.25
AFF4-201ENST00000265343 FAM204AQ9H8W3 233 aa16.64■□□□□ 0.25
AFF4-201ENST00000265343 DDX21Q9NR30 783 aaKnown RBP eCLIP16.64■□□□□ 0.25
AFF4-201ENST00000265343 SCINQ9Y6U3 715 aa16.64■□□□□ 0.25
AFF4-201ENST00000265343 TROQ12816 1431 aaPredicted RBP16.63■□□□□ 0.25
AFF4-201ENST00000265343 MAP3K7CLP57077 242 aa16.63■□□□□ 0.25
AFF4-201ENST00000265343 STK38LQ9Y2H1 464 aa16.63■□□□□ 0.25
AFF4-201ENST00000265343 THOC2Q8NI27 1593 aaKnown RBP16.63■□□□□ 0.25
AFF4-201ENST00000265343 INPP1P49441 399 aa16.63■□□□□ 0.25
AFF4-201ENST00000265343 ESCO1Q5FWF5 840 aa16.63■□□□□ 0.25
AFF4-201ENST00000265343 RSPH3Q86UC2 560 aa16.63■□□□□ 0.25
AFF4-201ENST00000265343 STX10O60499 249 aa16.63■□□□□ 0.25
AFF4-201ENST00000265343 DHX58Q96C10 678 aa16.63■□□□□ 0.25
AFF4-201ENST00000265343 ZKSCAN3Q9BRR0 538 aa16.63■□□□□ 0.25
AFF4-201ENST00000265343 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.63■□□□□ 0.25
AFF4-201ENST00000265343 CTNNA1P35221 906 aaKnown RBP16.63■□□□□ 0.25
AFF4-201ENST00000265343 RBM8AQ9Y5S9 174 aaKnown RBP16.63■□□□□ 0.25
AFF4-201ENST00000265343 ZNF644Q9H582 1327 aaPredicted RBP16.63■□□□□ 0.25
AFF4-201ENST00000265343 MCM7P33993 719 aa16.62■□□□□ 0.25
AFF4-201ENST00000265343 RILPQ96NA2 401 aa16.62■□□□□ 0.25
AFF4-201ENST00000265343 NOC4LQ9BVI4 516 aaKnown RBP16.62■□□□□ 0.25
AFF4-201ENST00000265343 B4DLN1 442 aa16.62■□□□□ 0.25
AFF4-201ENST00000265343 MRPL12P52815 198 aaKnown RBP16.62■□□□□ 0.25
AFF4-201ENST00000265343 TOM1L2Q6ZVM7 507 aa16.62■□□□□ 0.25
AFF4-201ENST00000265343 KIFC2Q96AC6 838 aa16.62■□□□□ 0.25
AFF4-201ENST00000265343 FBXO41Q8TF61 875 aa16.62■□□□□ 0.25
AFF4-201ENST00000265343 CLSTN2Q9H4D0 955 aa16.62■□□□□ 0.25
AFF4-201ENST00000265343 RABGGTAQ92696 567 aa16.62■□□□□ 0.25
AFF4-201ENST00000265343 CCDC124Q96CT7 223 aaKnown RBP16.62■□□□□ 0.25
AFF4-201ENST00000265343 TXLNGQ9NUQ3 528 aa16.62■□□□□ 0.25
AFF4-201ENST00000265343 TSPY3P0CV98 308 aa16.62■□□□□ 0.25
AFF4-201ENST00000265343 TSPY8P0CW00 308 aa16.62■□□□□ 0.25
AFF4-201ENST00000265343 PPP1R42Q7Z4L9 355 aa16.62■□□□□ 0.25
AFF4-201ENST00000265343 RRP15Q9Y3B9 282 aaKnown RBP16.62■□□□□ 0.25
AFF4-201ENST00000265343 SPDYE3A6NKU9 549 aa16.62■□□□□ 0.25
AFF4-201ENST00000265343 KRT15P19012 456 aa16.62■□□□□ 0.25
AFF4-201ENST00000265343 CCDC89Q8N998 374 aa16.62■□□□□ 0.25
AFF4-201ENST00000265343 CARD6Q9BX69 1037 aa16.62■□□□□ 0.25
AFF4-201ENST00000265343 ORC6Q9Y5N6 252 aa16.62■□□□□ 0.25
AFF4-201ENST00000265343 BRD2P25440 801 aaKnown RBP16.61■□□□□ 0.25
AFF4-201ENST00000265343 PPP1R21Q6ZMI0 780 aa16.61■□□□□ 0.25
AFF4-201ENST00000265343 ANKRD20A4Q4UJ75 823 aa16.61■□□□□ 0.25
AFF4-201ENST00000265343 ANKRD20A8PQ5CZ79 823 aa16.61■□□□□ 0.25
AFF4-201ENST00000265343 ANKRD20A2Q5SQ80 823 aa16.61■□□□□ 0.25
AFF4-201ENST00000265343 ANKRD20A1Q5TYW2 823 aa16.61■□□□□ 0.25
AFF4-201ENST00000265343 GRK7Q8WTQ7 553 aa16.61■□□□□ 0.25
AFF4-201ENST00000265343 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.61■□□□□ 0.25
AFF4-201ENST00000265343 DDX54Q8TDD1 881 aaKnown RBP16.61■□□□□ 0.25
AFF4-201ENST00000265343 PPANQ9NQ55 473 aaKnown RBP16.61■□□□□ 0.25
AFF4-201ENST00000265343 PPP1R1BQ9UD71 204 aaPredicted RBP16.61■□□□□ 0.25
AFF4-201ENST00000265343 IGF1RP08069 1367 aa16.61■□□□□ 0.25
AFF4-201ENST00000265343 CALUO43852 315 aaPredicted RBP16.61■□□□□ 0.25
AFF4-201ENST00000265343 SKIP12755 728 aa16.61■□□□□ 0.25
AFF4-201ENST00000265343 LMNB2Q03252 620 aa16.61■□□□□ 0.25
AFF4-201ENST00000265343 IFIH1Q9BYX4 1025 aaKnown RBP16.61■□□□□ 0.25
AFF4-201ENST00000265343 ASIC3Q9UHC3 531 aa16.61■□□□□ 0.25
AFF4-201ENST00000265343 CLTAP09496 248 aa16.61■□□□□ 0.25
AFF4-201ENST00000265343 CCT6AP40227 531 aaKnown RBP16.61■□□□□ 0.25
AFF4-201ENST00000265343 WDR44Q5JSH3 913 aa16.61■□□□□ 0.25
AFF4-201ENST00000265343 RBM26Q5T8P6 1007 aaKnown RBP16.61■□□□□ 0.25
AFF4-201ENST00000265343 NUTM2BA6NNL0 878 aaPredicted RBP16.61■□□□□ 0.25
AFF4-201ENST00000265343 NUTM2EB1AL46 878 aaPredicted RBP16.61■□□□□ 0.25
AFF4-201ENST00000265343 CCDC8Q9H0W5 538 aaPredicted RBP16.61■□□□□ 0.25
AFF4-201ENST00000265343 SLC8A3P57103 927 aa16.61■□□□□ 0.25
AFF4-201ENST00000265343 TBC1D8BQ0IIM8 1120 aa16.61■□□□□ 0.25
AFF4-201ENST00000265343 KLHDC4Q8TBB5 520 aa16.61■□□□□ 0.25
AFF4-201ENST00000265343 TUBB6Q9BUF5 446 aa16.61■□□□□ 0.25
AFF4-201ENST00000265343 CTNND2Q9UQB3 1225 aa16.61■□□□□ 0.25
AFF4-201ENST00000265343 CCDC169A6NNP5 214 aa16.6■□□□□ 0.25
AFF4-201ENST00000265343 TMEM87AQ8NBN3 555 aa16.6■□□□□ 0.25
AFF4-201ENST00000265343 NBPF9Q3BBW0 867 aa16.6■□□□□ 0.25
AFF4-201ENST00000265343 ZNF354CQ86Y25 554 aa16.6■□□□□ 0.25
AFF4-201ENST00000265343 CXorf38Q8TB03 319 aa16.6■□□□□ 0.25
AFF4-201ENST00000265343 GLT8D2Q9H1C3 349 aa16.6■□□□□ 0.25
AFF4-201ENST00000265343 CNOT10Q9H9A5 744 aaKnown RBP16.6■□□□□ 0.25
AFF4-201ENST00000265343 KIF1BO60333 1816 aa16.6■□□□□ 0.25
AFF4-201ENST00000265343 ASIC2Q16515 512 aa16.6■□□□□ 0.25
AFF4-201ENST00000265343 AOX1Q06278 1338 aa16.6■□□□□ 0.25
AFF4-201ENST00000265343 IGHDP01880 384 aa16.6■□□□□ 0.25
AFF4-201ENST00000265343 SATB2Q9UPW6 733 aa16.6■□□□□ 0.25
AFF4-201ENST00000265343 SPECC1L-ADORA2AF8WAN1 911 aa16.6■□□□□ 0.25
AFF4-201ENST00000265343 CCDC184Q52MB2 194 aa16.6■□□□□ 0.25
AFF4-201ENST00000265343 CCHCR1Q8TD31 782 aa16.6■□□□□ 0.25
AFF4-201ENST00000265343 BCAS4Q8TDM0 211 aa16.6■□□□□ 0.25
AFF4-201ENST00000265343 ZPR1O75312 459 aa16.6■□□□□ 0.25
AFF4-201ENST00000265343 FANCCQ00597 558 aa16.6■□□□□ 0.25
AFF4-201ENST00000265343 RPS6KA1Q15418 735 aa16.6■□□□□ 0.25
AFF4-201ENST00000265343 ACTR5Q9H9F9 607 aaPredicted RBP16.6■□□□□ 0.25
AFF4-201ENST00000265343 TEX13AQ9BXU3 409 aaPredicted RBP16.6■□□□□ 0.25
AFF4-201ENST00000265343 SNAPC4Q5SXM2 1469 aa16.59■□□□□ 0.25
AFF4-201ENST00000265343 NAA16Q6N069 864 aaPredicted RBP16.59■□□□□ 0.25
AFF4-201ENST00000265343 EXOC4Q96A65 974 aa16.59■□□□□ 0.25
AFF4-201ENST00000265343 GNA14O95837 355 aa16.59■□□□□ 0.25
AFF4-201ENST00000265343 BCRP11274 1271 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms