RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 SDR42E1Q8WUS8 393 aa22.66■■□□□ 1.22
CSPG5-201ENST00000264723 CARMIL3Q8ND23 1372 aa22.66■■□□□ 1.22
CSPG5-201ENST00000264723 BTBD18B2RXH4 712 aa22.66■■□□□ 1.22
CSPG5-201ENST00000264723 PDIA6Q15084 440 aa22.66■■□□□ 1.22
CSPG5-201ENST00000264723 HSP90B2PQ58FF3 399 aa22.66■■□□□ 1.22
CSPG5-201ENST00000264723 ATP1A3P13637 1013 aa22.65■■□□□ 1.22
CSPG5-201ENST00000264723 EPS15P42566 896 aa22.65■■□□□ 1.22
CSPG5-201ENST00000264723 TANGO6Q9C0B7 1094 aa22.65■■□□□ 1.22
CSPG5-201ENST00000264723 SCARF1Q14162 830 aa22.65■■□□□ 1.22
CSPG5-201ENST00000264723 TMTC2Q8N394 836 aa22.65■■□□□ 1.22
CSPG5-201ENST00000264723 NUP88Q99567 741 aaPredicted RBP22.65■■□□□ 1.22
CSPG5-201ENST00000264723 PDE8BO95263 885 aa22.65■■□□□ 1.22
CSPG5-201ENST00000264723 FAM193AP78312 1265 aa22.65■■□□□ 1.22
CSPG5-201ENST00000264723 STIM1Q13586 685 aa22.65■■□□□ 1.22
CSPG5-201ENST00000264723 SPTY2D1Q68D10 685 aaPredicted RBP22.65■■□□□ 1.22
CSPG5-201ENST00000264723 NLRP10Q86W26 655 aa22.64■■□□□ 1.22
CSPG5-201ENST00000264723 DIP2BQ9P265 1576 aa22.64■■□□□ 1.22
CSPG5-201ENST00000264723 ADKP55263 362 aaKnown RBP22.64■■□□□ 1.21
CSPG5-201ENST00000264723 TRMT1LQ7Z2T5 733 aaKnown RBP22.64■■□□□ 1.21
CSPG5-201ENST00000264723 ZNF174Q15697 407 aa22.64■■□□□ 1.21
CSPG5-201ENST00000264723 TRAPPC3LQ5T215 181 aa22.64■■□□□ 1.21
CSPG5-201ENST00000264723 KRI1Q8N9T8 703 aaKnown RBP22.64■■□□□ 1.21
CSPG5-201ENST00000264723 CARD6Q9BX69 1037 aa22.64■■□□□ 1.21
CSPG5-201ENST00000264723 SAP30BPQ9UHR5 308 aaKnown RBP22.64■■□□□ 1.21
CSPG5-201ENST00000264723 KIF5BP33176 963 aa22.63■■□□□ 1.21
CSPG5-201ENST00000264723 FANCLQ9NW38 375 aa22.63■■□□□ 1.21
CSPG5-201ENST00000264723 PUF60Q9UHX1 559 aaKnown RBP22.63■■□□□ 1.21
CSPG5-201ENST00000264723 HIBADHP31937 336 aaKnown RBP22.63■■□□□ 1.21
CSPG5-201ENST00000264723 LINC00301Q8NCQ3 95 aa22.63■■□□□ 1.21
CSPG5-201ENST00000264723 H7C1W4 665 aa22.63■■□□□ 1.21
CSPG5-201ENST00000264723 N4BP3O15049 544 aa22.63■■□□□ 1.21
CSPG5-201ENST00000264723 NLRP12P59046 1061 aa22.63■■□□□ 1.21
CSPG5-201ENST00000264723 HEATR3Q7Z4Q2 680 aa22.63■■□□□ 1.21
CSPG5-201ENST00000264723 NYXQ9GZU5 481 aa22.63■■□□□ 1.21
CSPG5-201ENST00000264723 NFE2L3Q9Y4A8 694 aa22.63■■□□□ 1.21
CSPG5-201ENST00000264723 GPIHBP1Q8IV16 184 aa22.62■■□□□ 1.21
CSPG5-201ENST00000264723 ST5P78524 1137 aa22.62■■□□□ 1.21
CSPG5-201ENST00000264723 SMAP1Q8IYB5 467 aaPredicted RBP22.62■■□□□ 1.21
CSPG5-201ENST00000264723 ZNF397Q8NF99 534 aaPredicted RBP22.62■■□□□ 1.21
CSPG5-201ENST00000264723 CCDC102AQ96A19 550 aa22.62■■□□□ 1.21
CSPG5-201ENST00000264723 UBA7P41226 1012 aa22.62■■□□□ 1.21
CSPG5-201ENST00000264723 ATL3Q6DD88 541 aa22.62■■□□□ 1.21
CSPG5-201ENST00000264723 GRAMD1CQ8IYS0 662 aa22.62■■□□□ 1.21
CSPG5-201ENST00000264723 GNAT2P19087 354 aa22.62■■□□□ 1.21
CSPG5-201ENST00000264723 CCT6AP40227 531 aaKnown RBP22.62■■□□□ 1.21
CSPG5-201ENST00000264723 EIF5P55010 431 aaKnown RBP22.62■■□□□ 1.21
CSPG5-201ENST00000264723 CNBD1Q8NA66 436 aa22.62■■□□□ 1.21
CSPG5-201ENST00000264723 DESI2Q9BSY9 194 aa22.62■■□□□ 1.21
CSPG5-201ENST00000264723 CDCA7Q9BWT1 371 aaPredicted RBP22.62■■□□□ 1.21
CSPG5-201ENST00000264723 V9GY48 417 aaPredicted RBP22.62■■□□□ 1.21
CSPG5-201ENST00000264723 LDHBP07195 334 aaKnown RBP22.61■■□□□ 1.21
CSPG5-201ENST00000264723 DNA2P51530 1060 aa22.61■■□□□ 1.21
CSPG5-201ENST00000264723 KIF5CO60282 957 aa22.61■■□□□ 1.21
CSPG5-201ENST00000264723 CCDC66A2RUB6 948 aa22.61■■□□□ 1.21
CSPG5-201ENST00000264723 IDEP14735 1019 aa22.61■■□□□ 1.21
CSPG5-201ENST00000264723 MCM6Q14566 821 aa22.61■■□□□ 1.21
CSPG5-201ENST00000264723 SMIM5Q71RC9 77 aa22.6■■□□□ 1.21
CSPG5-201ENST00000264723 MRFAP1L1Q96HT8 127 aa22.6■■□□□ 1.21
CSPG5-201ENST00000264723 CEMIPQ8WUJ3 1361 aa22.6■■□□□ 1.21
CSPG5-201ENST00000264723 ZNF609O15014 1411 aa22.6■■□□□ 1.21
CSPG5-201ENST00000264723 VWA3AA6NCI4 1184 aa22.6■■□□□ 1.21
CSPG5-201ENST00000264723 TRIM75PA6NK02 468 aa22.6■■□□□ 1.21
CSPG5-201ENST00000264723 YEATS4O95619 227 aa22.6■■□□□ 1.21
CSPG5-201ENST00000264723 RPS8P62241 208 aaKnown RBP22.6■■□□□ 1.21
CSPG5-201ENST00000264723 SF3B2Q13435 895 aaKnown RBP22.6■■□□□ 1.21
CSPG5-201ENST00000264723 RRAGBQ5VZM2 374 aa22.6■■□□□ 1.21
CSPG5-201ENST00000264723 ATG3Q9NT62 314 aa22.6■■□□□ 1.21
CSPG5-201ENST00000264723 OGFRQ9NZT2 677 aa22.6■■□□□ 1.21
CSPG5-201ENST00000264723 TECPR2O15040 1411 aa22.6■■□□□ 1.21
CSPG5-201ENST00000264723 PRKAB2O43741 272 aa22.6■■□□□ 1.21
CSPG5-201ENST00000264723 BMS1Q14692 1282 aaKnown RBP22.6■■□□□ 1.21
CSPG5-201ENST00000264723 VPS54Q9P1Q0 977 aa22.6■■□□□ 1.21
CSPG5-201ENST00000264723 PCDHA5Q9Y5H7 936 aa22.6■■□□□ 1.21
CSPG5-201ENST00000264723 USP42Q9H9J4 1324 aaKnown RBP22.6■■□□□ 1.21
CSPG5-201ENST00000264723 KIF20BQ96Q89 1820 aa22.6■■□□□ 1.21
CSPG5-201ENST00000264723 C1orf167Q5SNV9 1468 aa22.59■■□□□ 1.21
CSPG5-201ENST00000264723 RTEL1Q9NZ71 1219 aa22.59■■□□□ 1.21
CSPG5-201ENST00000264723 SERTAD1Q9UHV2 236 aa22.59■■□□□ 1.21
CSPG5-201ENST00000264723 ENOX2Q16206 610 aaKnown RBP22.59■■□□□ 1.21
CSPG5-201ENST00000264723 ZC3H12CQ9C0D7 883 aaKnown RBP22.59■■□□□ 1.21
CSPG5-201ENST00000264723 LONRF3Q496Y0 759 aa22.59■■□□□ 1.21
CSPG5-201ENST00000264723 USPL1Q5W0Q7 1092 aa22.59■■□□□ 1.21
CSPG5-201ENST00000264723 TTLL11Q8NHH1 800 aa22.59■■□□□ 1.21
CSPG5-201ENST00000264723 BAG1Q99933 345 aaPredicted RBP22.59■■□□□ 1.21
CSPG5-201ENST00000264723 USP21Q9UK80 565 aa22.59■■□□□ 1.21
CSPG5-201ENST00000264723 MROH5Q6ZUA9 1318 aa22.59■■□□□ 1.21
CSPG5-201ENST00000264723 MCM7P33993 719 aa22.58■■□□□ 1.21
CSPG5-201ENST00000264723 CHRNDQ07001 517 aa22.58■■□□□ 1.21
CSPG5-201ENST00000264723 EEF2KMTQ96G04 330 aa22.58■■□□□ 1.21
CSPG5-201ENST00000264723 ERO1AQ96HE7 468 aa22.58■■□□□ 1.21
CSPG5-201ENST00000264723 FAM47AQ5JRC9 791 aa22.58■■□□□ 1.21
CSPG5-201ENST00000264723 DENND2AQ9ULE3 1009 aa22.58■■□□□ 1.21
CSPG5-201ENST00000264723 ZNF76P36508 570 aa22.58■■□□□ 1.2
CSPG5-201ENST00000264723 IFT172Q9UG01 1749 aa22.58■■□□□ 1.2
CSPG5-201ENST00000264723 USP17L12C9JPN9 530 aa22.57■■□□□ 1.2
CSPG5-201ENST00000264723 USP17L21D6R901 530 aa22.57■■□□□ 1.2
CSPG5-201ENST00000264723 UFL1O94874 794 aa22.57■■□□□ 1.2
CSPG5-201ENST00000264723 TMEM87BQ96K49 555 aa22.57■■□□□ 1.2
CSPG5-201ENST00000264723 EIF6P56537 245 aaKnown RBP22.57■■□□□ 1.2
CSPG5-201ENST00000264723 ATG9AQ7Z3C6 839 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms