RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 EDC3Q96F86 508 aaKnown RBP15.7■□□□□ 0.1
SLIRP-201ENST00000238688 ZSCAN31Q96LW9 406 aaPredicted RBP15.7■□□□□ 0.1
SLIRP-201ENST00000238688 SH2B1Q9NRF2 756 aaPredicted RBP15.7■□□□□ 0.1
SLIRP-201ENST00000238688 TSKSQ9UJT2 592 aa15.7■□□□□ 0.1
SLIRP-201ENST00000238688 PALD1Q9ULE6 856 aa15.7■□□□□ 0.1
SLIRP-201ENST00000238688 MAST3O60307 1309 aa15.69■□□□□ 0.1
SLIRP-201ENST00000238688 SLC27A2O14975 620 aa15.69■□□□□ 0.1
SLIRP-201ENST00000238688 DDIT3P35638 169 aa15.69■□□□□ 0.1
SLIRP-201ENST00000238688 MMP14P50281 582 aa15.69■□□□□ 0.1
SLIRP-201ENST00000238688 NOGQ13253 232 aa15.69■□□□□ 0.1
SLIRP-201ENST00000238688 MOB2Q70IA6 237 aa15.69■□□□□ 0.1
SLIRP-201ENST00000238688 ZNF589Q86UQ0 364 aaPredicted RBP15.69■□□□□ 0.1
SLIRP-201ENST00000238688 VPS37DQ86XT2 251 aa15.69■□□□□ 0.1
SLIRP-201ENST00000238688 OGFOD1Q8N543 542 aa15.69■□□□□ 0.1
SLIRP-201ENST00000238688 TDRD7Q8NHU6 1098 aaKnown RBP15.69■□□□□ 0.1
SLIRP-201ENST00000238688 FAM84BQ96KN1 310 aaPredicted RBP15.69■□□□□ 0.1
SLIRP-201ENST00000238688 FKBP1AP62942 108 aaKnown RBP15.68■□□□□ 0.1
SLIRP-201ENST00000238688 CUL4AQ13619 759 aa15.68■□□□□ 0.1
SLIRP-201ENST00000238688 ALX1Q15699 326 aa15.68■□□□□ 0.1
SLIRP-201ENST00000238688 RUFY3Q7L099 469 aa15.68■□□□□ 0.1
SLIRP-201ENST00000238688 ZNF804AQ7Z570 1209 aa15.68■□□□□ 0.1
SLIRP-201ENST00000238688 CERS3Q8IU89 383 aa15.68■□□□□ 0.1
SLIRP-201ENST00000238688 MTMR14Q8NCE2 650 aa15.68■□□□□ 0.1
SLIRP-201ENST00000238688 TTC14Q96N46 770 aa15.68■□□□□ 0.1
SLIRP-201ENST00000238688 JAG2Q9Y219 1238 aa15.68■□□□□ 0.1
SLIRP-201ENST00000238688 FAM205AQ6ZU69 1335 aa15.68■□□□□ 0.1
SLIRP-201ENST00000238688 CAPN15O75808 1086 aa15.67■□□□□ 0.1
SLIRP-201ENST00000238688 SLC10A3P09131 477 aa15.67■□□□□ 0.1
SLIRP-201ENST00000238688 HSPD1P10809 573 aaKnown RBP15.67■□□□□ 0.1
SLIRP-201ENST00000238688 PDE6AP16499 860 aa15.67■□□□□ 0.1
SLIRP-201ENST00000238688 GYG1P46976 350 aa15.67■□□□□ 0.1
SLIRP-201ENST00000238688 SLC4A3P48751 1232 aa15.67■□□□□ 0.1
SLIRP-201ENST00000238688 NT5C2P49902 561 aa15.67■□□□□ 0.1
SLIRP-201ENST00000238688 NUCB2P80303 420 aa15.67■□□□□ 0.1
SLIRP-201ENST00000238688 SLC9C2Q5TAH2 1124 aa15.67■□□□□ 0.1
SLIRP-201ENST00000238688 SPTY2D1Q68D10 685 aaPredicted RBP15.67■□□□□ 0.1
SLIRP-201ENST00000238688 LIMCH1Q9UPQ0 1083 aa15.67■□□□□ 0.1
SLIRP-201ENST00000238688 WDR19Q8NEZ3 1342 aa15.67■□□□□ 0.1
SLIRP-201ENST00000238688 SALL1Q9NSC2 1324 aa15.67■□□□□ 0.1
SLIRP-201ENST00000238688 CASTP20810 708 aaKnown RBP15.66■□□□□ 0.1
SLIRP-201ENST00000238688 PTMSP20962 102 aa15.66■□□□□ 0.1
SLIRP-201ENST00000238688 HIBADHP31937 336 aaKnown RBP15.66■□□□□ 0.1
SLIRP-201ENST00000238688 ZNF157P51786 506 aaPredicted RBP15.66■□□□□ 0.1
SLIRP-201ENST00000238688 FKBP1BP68106 108 aa15.66■□□□□ 0.1
SLIRP-201ENST00000238688 KIF23Q02241 960 aaPredicted RBP15.66■□□□□ 0.1
SLIRP-201ENST00000238688 BLOC1S2Q6QNY1 142 aa15.66■□□□□ 0.1
SLIRP-201ENST00000238688 RASAL3Q86YV0 1011 aa15.66■□□□□ 0.1
SLIRP-201ENST00000238688 RASEFQ8IZ41 740 aa15.66■□□□□ 0.1
SLIRP-201ENST00000238688 FBXL16Q8N461 479 aa15.66■□□□□ 0.1
SLIRP-201ENST00000238688 OSBP2Q969R2 916 aa15.66■□□□□ 0.1
SLIRP-201ENST00000238688 CCDC102AQ96A19 550 aa15.66■□□□□ 0.1
SLIRP-201ENST00000238688 ANP32EQ9BTT0 268 aa15.66■□□□□ 0.1
SLIRP-201ENST00000238688 HDAC9Q9UKV0 1011 aa15.66■□□□□ 0.1
SLIRP-201ENST00000238688 TCRBV5S4A2TA0A5A2 114 aa15.65■□□□□ 0.1
SLIRP-201ENST00000238688 IDH1O75874 414 aaKnown RBP15.65■□□□□ 0.1
SLIRP-201ENST00000238688 CD2BP2O95400 341 aaKnown RBP15.65■□□□□ 0.1
SLIRP-201ENST00000238688 BCAMP50895 628 aa15.65■□□□□ 0.1
SLIRP-201ENST00000238688 IMMTQ16891 758 aaKnown RBP15.65■□□□□ 0.1
SLIRP-201ENST00000238688 PRMT6Q96LA8 375 aaPredicted RBP15.65■□□□□ 0.1
SLIRP-201ENST00000238688 JAKMIP1Q96N16 626 aaKnown RBP15.65■□□□□ 0.1
SLIRP-201ENST00000238688 BEGAINQ9BUH8 593 aa15.65■□□□□ 0.1
SLIRP-201ENST00000238688 NDUFB9Q9Y6M9 179 aa15.65■□□□□ 0.1
SLIRP-201ENST00000238688 SSC5DA1L4H1 1573 aa15.64■□□□□ 0.09
SLIRP-201ENST00000238688 F8W031 263 aaPredicted RBP15.64■□□□□ 0.09
SLIRP-201ENST00000238688 UBE2Q2LH0YL09 131 aa15.64■□□□□ 0.09
SLIRP-201ENST00000238688 GPAA1O43292 621 aa15.64■□□□□ 0.09
SLIRP-201ENST00000238688 GRIK5Q16478 980 aa15.64■□□□□ 0.09
SLIRP-201ENST00000238688 CFAP100Q494V2 611 aa15.64■□□□□ 0.09
SLIRP-201ENST00000238688 WDR66Q8TBY9 1149 aa15.64■□□□□ 0.09
SLIRP-201ENST00000238688 TMX3Q96JJ7 454 aa15.64■□□□□ 0.09
SLIRP-201ENST00000238688 CSRNP1Q96S65 589 aa15.64■□□□□ 0.09
SLIRP-201ENST00000238688 PIH1D3Q9NQM4 214 aaKnown RBP15.64■□□□□ 0.09
SLIRP-201ENST00000238688 PDRG1Q9NUG6 133 aa15.64■□□□□ 0.09
SLIRP-201ENST00000238688 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.64■□□□□ 0.09
SLIRP-201ENST00000238688 SPDYE2BA6NHP3 402 aa15.63■□□□□ 0.09
SLIRP-201ENST00000238688 CA12O43570 354 aa15.63■□□□□ 0.09
SLIRP-201ENST00000238688 SPDYE6P0CI01 402 aa15.63■□□□□ 0.09
SLIRP-201ENST00000238688 RPS6KB1P23443 525 aa15.63■□□□□ 0.09
SLIRP-201ENST00000238688 DLGAP5Q15398 846 aa15.63■□□□□ 0.09
SLIRP-201ENST00000238688 GIMAP6Q6P9H5 292 aa15.63■□□□□ 0.09
SLIRP-201ENST00000238688 APOBEC3FQ8IUX4 373 aaKnown RBP15.63■□□□□ 0.09
SLIRP-201ENST00000238688 NEK1Q96PY6 1258 aa15.63■□□□□ 0.09
SLIRP-201ENST00000238688 NACAP1Q9BZK3 213 aa15.63■□□□□ 0.09
SLIRP-201ENST00000238688 SLKQ9H2G2 1235 aaPredicted RBP15.63■□□□□ 0.09
SLIRP-201ENST00000238688 LRP2BPQ9P2M1 347 aa15.63■□□□□ 0.09
SLIRP-201ENST00000238688 ZNF532Q9HCE3 1301 aa15.63■□□□□ 0.09
SLIRP-201ENST00000238688 LAMB1P07942 1786 aa15.62■□□□□ 0.09
SLIRP-201ENST00000238688 M0R2C6 588 aa15.62■□□□□ 0.09
SLIRP-201ENST00000238688 PI16Q6UXB8 463 aa15.62■□□□□ 0.09
SLIRP-201ENST00000238688 SEC62Q99442 399 aaKnown RBP15.62■□□□□ 0.09
SLIRP-201ENST00000238688 MTA3Q9BTC8 594 aa15.62■□□□□ 0.09
SLIRP-201ENST00000238688 UPF3BQ9BZI7 483 aaKnown RBP15.62■□□□□ 0.09
SLIRP-201ENST00000238688 FZD1Q9UP38 647 aa15.62■□□□□ 0.09
SLIRP-201ENST00000238688 COL1A1P02452 1464 aaPredicted RBP15.61■□□□□ 0.09
SLIRP-201ENST00000238688 CYP21A2P08686 494 aa15.61■□□□□ 0.09
SLIRP-201ENST00000238688 PCP11498 1178 aaKnown RBP15.61■□□□□ 0.09
SLIRP-201ENST00000238688 MFSD14BQ5SR56 506 aa15.61■□□□□ 0.09
SLIRP-201ENST00000238688 LDLRAD1Q5T700 205 aa15.61■□□□□ 0.09
SLIRP-201ENST00000238688 CLEC17AQ6ZS10 378 aa15.61■□□□□ 0.09
SLIRP-201ENST00000238688 TBC1D22AQ8WUA7 517 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms