RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 TSKSQ9UJT2 592 aa14.38□□□□□ -0.11
VAMP4-201ENST00000236192 STX17P56962 302 aa14.38□□□□□ -0.11
VAMP4-201ENST00000236192 LONRF3Q496Y0 759 aa14.38□□□□□ -0.11
VAMP4-201ENST00000236192 PHLDB3Q6NSJ2 640 aa14.38□□□□□ -0.11
VAMP4-201ENST00000236192 NLRP14Q86W24 1093 aa14.38□□□□□ -0.11
VAMP4-201ENST00000236192 RPS6KA5O75582 802 aa14.38□□□□□ -0.11
VAMP4-201ENST00000236192 CIB2O75838 187 aa14.38□□□□□ -0.11
VAMP4-201ENST00000236192 SMTNP53814 917 aa14.38□□□□□ -0.11
VAMP4-201ENST00000236192 CCDC65Q8IXS2 484 aa14.38□□□□□ -0.11
VAMP4-201ENST00000236192 FGD4Q96M96 766 aa14.38□□□□□ -0.11
VAMP4-201ENST00000236192 DDX21Q9NR30 783 aaKnown RBP eCLIP14.38□□□□□ -0.11
VAMP4-201ENST00000236192 SLC52A1Q9NWF4 448 aa14.38□□□□□ -0.11
VAMP4-201ENST00000236192 KCNG1Q9UIX4 513 aa14.38□□□□□ -0.11
VAMP4-201ENST00000236192 HMGB1P1B2RPK0 211 aaPredicted RBP14.37□□□□□ -0.11
VAMP4-201ENST00000236192 ARHGAP18Q8N392 663 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 ARHGEF2Q92974 986 aaKnown RBP14.37□□□□□ -0.11
VAMP4-201ENST00000236192 IQCGQ9H095 443 aaKnown RBP14.37□□□□□ -0.11
VAMP4-201ENST00000236192 ATP6V0A4Q9HBG4 840 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 GSTTP1A0A1W2PQM5 241 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 PFKFB2O60825 505 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 TMED1Q13445 227 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 KRT71Q3SY84 523 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 CCDC26Q8TAB7 109 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 HVCN1Q96D96 273 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 FAM167BQ9BTA0 163 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 KCNK9Q9NPC2 374 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 GPTP24298 496 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 PSMC4P43686 418 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 GUCY2FP51841 1108 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 SPDYE1Q8NFV5 336 aaPredicted RBP14.37□□□□□ -0.11
VAMP4-201ENST00000236192 FANCLQ9NW38 375 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 CTTNBP2NLQ9P2B4 639 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 RABGAP1Q9Y3P9 1069 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 AP1G2O75843 785 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 SKIP12755 728 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 IRAK1P51617 712 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 GOLGA8FQ08AF8 430 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 GOLGA8DPQ0D2H9 430 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 TBC1D1Q86TI0 1168 aaPredicted RBP14.37□□□□□ -0.11
VAMP4-201ENST00000236192 KLHL29Q96CT2 875 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 TRIM47Q96LD4 638 aa14.37□□□□□ -0.11
VAMP4-201ENST00000236192 RCSD1Q6JBY9 416 aa14.36□□□□□ -0.11
VAMP4-201ENST00000236192 CTNNBL1Q8WYA6 563 aaPredicted RBP14.36□□□□□ -0.11
VAMP4-201ENST00000236192 EXOC5O00471 708 aa14.36□□□□□ -0.11
VAMP4-201ENST00000236192 ZMYND10O75800 440 aa14.36□□□□□ -0.11
VAMP4-201ENST00000236192 CPP00450 1065 aa14.36□□□□□ -0.11
VAMP4-201ENST00000236192 AFMP43652 599 aa14.36□□□□□ -0.11
VAMP4-201ENST00000236192 PSMD7P51665 324 aa14.36□□□□□ -0.11
VAMP4-201ENST00000236192 ICA1Q05084 483 aa14.36□□□□□ -0.11
VAMP4-201ENST00000236192 COG1Q8WTW3 980 aa14.36□□□□□ -0.11
VAMP4-201ENST00000236192 CFAP73A6NFT4 308 aa14.36□□□□□ -0.11
VAMP4-201ENST00000236192 H3BQF6 201 aa14.36□□□□□ -0.11
VAMP4-201ENST00000236192 KRT9P35527 623 aa14.36□□□□□ -0.11
VAMP4-201ENST00000236192 PPP1R42Q7Z4L9 355 aa14.36□□□□□ -0.11
VAMP4-201ENST00000236192 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.36□□□□□ -0.11
VAMP4-201ENST00000236192 HAUS2Q9NVX0 235 aa14.36□□□□□ -0.11
VAMP4-201ENST00000236192 FAF1Q9UNN5 650 aaPredicted RBP14.36□□□□□ -0.11
VAMP4-201ENST00000236192 AKAP2Q9Y2D5 859 aa14.36□□□□□ -0.11
VAMP4-201ENST00000236192 ZRANB2O95218 330 aaKnown RBP eCLIP14.36□□□□□ -0.11
VAMP4-201ENST00000236192 TRHP20396 242 aaPredicted RBP14.36□□□□□ -0.11
VAMP4-201ENST00000236192 CCT6AP40227 531 aaKnown RBP14.36□□□□□ -0.11
VAMP4-201ENST00000236192 PPARDQ03181 441 aa14.36□□□□□ -0.11
VAMP4-201ENST00000236192 SMC6Q96SB8 1091 aa14.36□□□□□ -0.11
VAMP4-201ENST00000236192 ZFXP17010 805 aaPredicted RBP14.35□□□□□ -0.11
VAMP4-201ENST00000236192 SSRP1Q08945 709 aaKnown RBP14.35□□□□□ -0.11
VAMP4-201ENST00000236192 ANO1Q5XXA6 986 aa14.35□□□□□ -0.11
VAMP4-201ENST00000236192 TMEM132EQ6IEE7 984 aa14.35□□□□□ -0.11
VAMP4-201ENST00000236192 CENPKQ9BS16 269 aa14.35□□□□□ -0.11
VAMP4-201ENST00000236192 NKIRAS1Q9NYS0 192 aa14.35□□□□□ -0.11
VAMP4-201ENST00000236192 KLHL14Q9P2G3 628 aa14.35□□□□□ -0.11
VAMP4-201ENST00000236192 EMBQ6PCB8 327 aa14.35□□□□□ -0.11
VAMP4-201ENST00000236192 LRRC2Q9BYS8 371 aa14.35□□□□□ -0.11
VAMP4-201ENST00000236192 EPN3Q9H201 632 aa14.35□□□□□ -0.11
VAMP4-201ENST00000236192 PARP3Q9Y6F1 533 aa14.35□□□□□ -0.11
VAMP4-201ENST00000236192 N4BP1O75113 896 aaKnown RBP14.35□□□□□ -0.11
VAMP4-201ENST00000236192 PAPOLAP51003 745 aaKnown RBP14.35□□□□□ -0.11
VAMP4-201ENST00000236192 NMIQ13287 307 aaPredicted RBP14.35□□□□□ -0.11
VAMP4-201ENST00000236192 DPCR1Q3MIW9 517 aa14.35□□□□□ -0.11
VAMP4-201ENST00000236192 HHATQ5VTY9 493 aa14.35□□□□□ -0.11
VAMP4-201ENST00000236192 ARMCX5Q6P1M9 558 aa14.35□□□□□ -0.11
VAMP4-201ENST00000236192 RIC3Q7Z5B4 369 aa14.35□□□□□ -0.11
VAMP4-201ENST00000236192 ARHGAP24Q8N264 748 aa14.35□□□□□ -0.11
VAMP4-201ENST00000236192 MTRF1LQ9UGC7 380 aaKnown RBP14.35□□□□□ -0.11
VAMP4-201ENST00000236192 OPHN1O60890 802 aa14.35□□□□□ -0.11
VAMP4-201ENST00000236192 COG7P83436 770 aa14.35□□□□□ -0.11
VAMP4-201ENST00000236192 PREPLQ4J6C6 727 aaPredicted RBP14.35□□□□□ -0.11
VAMP4-201ENST00000236192 ITFG2Q969R8 447 aa14.35□□□□□ -0.11
VAMP4-201ENST00000236192 SGSM3Q96HU1 749 aa14.35□□□□□ -0.11
VAMP4-201ENST00000236192 CCDC77Q9BR77 488 aa14.35□□□□□ -0.11
VAMP4-201ENST00000236192 VSNL1P62760 191 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 ZBTB16Q05516 673 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 PRPF4BQ13523 1007 aaKnown RBP14.34□□□□□ -0.11
VAMP4-201ENST00000236192 SULT6B1Q6IMI4 303 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 MCUR1Q96AQ8 359 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 SYNRGQ9UMZ2 1314 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 PRDM2Q13029 1718 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 SLC27A2O14975 620 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 FERP16591 822 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 HSP90AA5PQ58FG0 334 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 FAM133BQ5BKY9 247 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms