RNA–Protein interactions for RNA: ENST00000437034.6

CAST-209, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 3,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-209ENST00000437034 RSPH6AQ9H0K4 717 aa7.74□□□□□ -1.17
CAST-209ENST00000437034 DEKP35659 375 aaKnown RBP7.74□□□□□ -1.17
CAST-209ENST00000437034 BRPF3Q9ULD4 1205 aa7.73□□□□□ -1.17
CAST-209ENST00000437034 GLIPR1L2Q4G1C9 344 aa7.72□□□□□ -1.17
CAST-209ENST00000437034 NACADO15069 1562 aa7.72□□□□□ -1.17
CAST-209ENST00000437034 ZNF592Q92610 1267 aa7.7□□□□□ -1.18
CAST-209ENST00000437034 PUS7Q96PZ0 661 aaKnown RBP7.7□□□□□ -1.18
CAST-209ENST00000437034 MSH5O43196 834 aa7.69□□□□□ -1.18
CAST-209ENST00000437034 ZFP91Q96JP5 570 aaPredicted RBP7.69□□□□□ -1.18
CAST-209ENST00000437034 UNC13AQ9UPW8 1703 aa7.68□□□□□ -1.18
CAST-209ENST00000437034 PRDM10Q9NQV6 1147 aa7.68□□□□□ -1.18
CAST-209ENST00000437034 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.68□□□□□ -1.18
CAST-209ENST00000437034 ZNF526Q8TF50 670 aaPredicted RBP7.66□□□□□ -1.18
CAST-209ENST00000437034 NBR1Q14596 966 aa7.66□□□□□ -1.18
CAST-209ENST00000437034 ERICH6BQ5W0A0 696 aa7.66□□□□□ -1.18
CAST-209ENST00000437034 MYT1LQ9UL68 1186 aa7.65□□□□□ -1.18
CAST-209ENST00000437034 ZBTB7CA1YPR0 619 aa7.65□□□□□ -1.18
CAST-209ENST00000437034 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.65□□□□□ -1.19
CAST-209ENST00000437034 TICAM2Q86XR7 235 aa7.63□□□□□ -1.19
CAST-209ENST00000437034 NCLP19338 710 aaKnown RBP7.63□□□□□ -1.19
CAST-209ENST00000437034 ZNF428Q96B54 188 aa7.63□□□□□ -1.19
CAST-209ENST00000437034 ZMYND15Q9H091 742 aa7.63□□□□□ -1.19
CAST-209ENST00000437034 TMED8Q6PL24 325 aaPredicted RBP7.62□□□□□ -1.19
CAST-209ENST00000437034 NECTIN2Q92692 538 aa7.62□□□□□ -1.19
CAST-209ENST00000437034 CNPY4Q8N129 248 aa7.61□□□□□ -1.19
CAST-209ENST00000437034 PSMD1Q99460 953 aa7.6□□□□□ -1.19
CAST-209ENST00000437034 TRHP20396 242 aaPredicted RBP7.6□□□□□ -1.19
CAST-209ENST00000437034 CWC22Q9HCG8 908 aaKnown RBP7.6□□□□□ -1.19
CAST-209ENST00000437034 NAP1L2Q9ULW6 460 aaPredicted RBP7.59□□□□□ -1.19
CAST-209ENST00000437034 ARID4BQ4LE39 1312 aaPredicted RBP7.59□□□□□ -1.19
CAST-209ENST00000437034 ACIN1Q9UKV3 1341 aaKnown RBP7.58□□□□□ -1.2
CAST-209ENST00000437034 CLSTN1O94985 981 aa7.58□□□□□ -1.2
CAST-209ENST00000437034 CERS3Q8IU89 383 aa7.56□□□□□ -1.2
CAST-209ENST00000437034 PPARGC1BQ86YN6 1023 aaKnown RBP7.55□□□□□ -1.2
CAST-209ENST00000437034 USP35Q9P2H5 1018 aa7.55□□□□□ -1.2
CAST-209ENST00000437034 RBM25P49756 843 aaKnown RBP7.54□□□□□ -1.2
CAST-209ENST00000437034 RAD21O60216 631 aa7.53□□□□□ -1.2
CAST-209ENST00000437034 ADRA2BP18089 450 aa7.53□□□□□ -1.2
CAST-209ENST00000437034 RB1CC1Q8TDY2 1594 aa7.53□□□□□ -1.2
CAST-209ENST00000437034 WWC1Q8IX03 1113 aa7.53□□□□□ -1.2
CAST-209ENST00000437034 PPM1GO15355 546 aaPredicted RBP7.52□□□□□ -1.21
CAST-209ENST00000437034 ZNF692Q9BU19 519 aaPredicted RBP7.52□□□□□ -1.21
CAST-209ENST00000437034 CHMP4BQ9H444 224 aaKnown RBP7.52□□□□□ -1.21
CAST-209ENST00000437034 TSHZ2Q9NRE2 1034 aa7.52□□□□□ -1.21
CAST-209ENST00000437034 PLCD4Q9BRC7 762 aa7.51□□□□□ -1.21
CAST-209ENST00000437034 FOXD4L5Q5VV16 416 aaPredicted RBP7.5□□□□□ -1.21
CAST-209ENST00000437034 KCTD17Q8N5Z5 321 aa7.5□□□□□ -1.21
CAST-209ENST00000437034 FOXD4L4Q8WXT5 416 aaPredicted RBP7.5□□□□□ -1.21
CAST-209ENST00000437034 SECISBP2LQ93073 1101 aaKnown RBP7.5□□□□□ -1.21
CAST-209ENST00000437034 PTMSP20962 102 aa7.48□□□□□ -1.21
CAST-209ENST00000437034 PRDM16Q9HAZ2 1276 aa7.48□□□□□ -1.21
CAST-209ENST00000437034 ARID3CA6NKF2 412 aa7.46□□□□□ -1.21
CAST-209ENST00000437034 NPM3O75607 178 aaKnown RBP7.46□□□□□ -1.21
CAST-209ENST00000437034 TEX2Q8IWB9 1127 aa7.46□□□□□ -1.21
CAST-209ENST00000437034 MTMR7Q9Y216 660 aa7.46□□□□□ -1.22
CAST-209ENST00000437034 FAM177A1Q8N128 213 aaPredicted RBP7.45□□□□□ -1.22
CAST-209ENST00000437034 C1orf115Q9H7X2 142 aa7.45□□□□□ -1.22
CAST-209ENST00000437034 IPO4Q8TEX9 1081 aaKnown RBP7.44□□□□□ -1.22
CAST-209ENST00000437034 PEG3Q9GZU2 1588 aa7.44□□□□□ -1.22
CAST-209ENST00000437034 BICRAQ9NZM4 1560 aa7.44□□□□□ -1.22
CAST-209ENST00000437034 NPM1P06748 294 aaKnown RBP eCLIP7.43□□□□□ -1.22
CAST-209ENST00000437034 NEUROD1Q13562 356 aa7.43□□□□□ -1.22
CAST-209ENST00000437034 BBXQ8WY36 941 aaPredicted RBP7.43□□□□□ -1.22
CAST-209ENST00000437034 ABCC9O60706 1549 aa7.43□□□□□ -1.22
CAST-209ENST00000437034 FAM43BQ6ZT52 329 aaPredicted RBP7.42□□□□□ -1.22
CAST-209ENST00000437034 OS9Q13438 667 aaPredicted RBP7.41□□□□□ -1.22
CAST-209ENST00000437034 KDM4AO75164 1064 aa7.4□□□□□ -1.22
CAST-209ENST00000437034 PATL2C9JE40 543 aaKnown RBP7.4□□□□□ -1.22
CAST-209ENST00000437034 RTL5Q5HYW3 569 aaPredicted RBP7.4□□□□□ -1.23
CAST-209ENST00000437034 FTSJ3Q8IY81 847 aaKnown RBP7.4□□□□□ -1.23
CAST-209ENST00000437034 KCNG1Q9UIX4 513 aa7.39□□□□□ -1.23
CAST-209ENST00000437034 CCDC27Q2M243 656 aa7.39□□□□□ -1.23
CAST-209ENST00000437034 ANAPC15P60006 121 aa7.38□□□□□ -1.23
CAST-209ENST00000437034 PIAS4Q8N2W9 510 aaPredicted RBP7.38□□□□□ -1.23
CAST-209ENST00000437034 AEBP1Q8IUX7 1158 aa7.37□□□□□ -1.23
CAST-209ENST00000437034 BRPF1P55201 1214 aaPredicted RBP7.37□□□□□ -1.23
CAST-209ENST00000437034 CC2D2BQ6DHV5 1058 aa7.37□□□□□ -1.23
CAST-209ENST00000437034 PTMAP06454 111 aaKnown RBP7.36□□□□□ -1.23
CAST-209ENST00000437034 CHRM1P11229 460 aaPredicted RBP7.35□□□□□ -1.23
CAST-209ENST00000437034 FAM50AQ14320 339 aaKnown RBP7.35□□□□□ -1.23
CAST-209ENST00000437034 RNF216Q9NWF9 866 aaPredicted RBP7.35□□□□□ -1.23
CAST-209ENST00000437034 CANXP27824 592 aaKnown RBP7.35□□□□□ -1.23
CAST-209ENST00000437034 FAM9BQ8IZU0 186 aa7.34□□□□□ -1.23
CAST-209ENST00000437034 GPATCH11Q8N954 259 aa7.34□□□□□ -1.23
CAST-209ENST00000437034 FAM193AP78312 1265 aa7.34□□□□□ -1.23
CAST-209ENST00000437034 POTEDQ86YR6 584 aa7.34□□□□□ -1.23
CAST-209ENST00000437034 RGS22Q8NE09 1264 aa7.34□□□□□ -1.23
CAST-209ENST00000437034 YTHDC1Q96MU7 727 aaKnown RBP7.34□□□□□ -1.23
CAST-209ENST00000437034 SETQ01105 290 aaPredicted RBP7.32□□□□□ -1.24
CAST-209ENST00000437034 CNGB1Q14028 1251 aaPredicted RBP7.32□□□□□ -1.24
CAST-209ENST00000437034 GRIPAP1Q4V328 841 aa7.32□□□□□ -1.24
CAST-209ENST00000437034 APBB1O00213 710 aa7.31□□□□□ -1.24
CAST-209ENST00000437034 MCCP23508 829 aa7.31□□□□□ -1.24
CAST-209ENST00000437034 NEFMP07197 916 aa7.3□□□□□ -1.24
CAST-209ENST00000437034 NEUROD2Q15784 382 aa7.29□□□□□ -1.24
CAST-209ENST00000437034 DNAJC2Q99543 621 aaKnown RBP7.29□□□□□ -1.24
CAST-209ENST00000437034 PRDM2Q13029 1718 aa7.28□□□□□ -1.24
CAST-209ENST00000437034 GTF2E1P29083 439 aaPredicted RBP7.27□□□□□ -1.25
CAST-209ENST00000437034 TMCO4Q5TGY1 634 aa7.26□□□□□ -1.25
CAST-209ENST00000437034 MFAP1P55081 439 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms