RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 GAGE12GP0CL81 117 aa10.13□□□□□ -0.79
PHGDH-233ENST00000642021 GAGE12IP0CL82 117 aa10.13□□□□□ -0.79
PHGDH-233ENST00000642021 SCGB1C2P0DMR2 95 aa10.13□□□□□ -0.79
PHGDH-233ENST00000642021 GAGE4Q13068 117 aa10.13□□□□□ -0.79
PHGDH-233ENST00000642021 RNASE13Q5GAN3 156 aaKnown RBP10.13□□□□□ -0.79
PHGDH-233ENST00000642021 C18orf65Q6ZTR6 163 aa10.13□□□□□ -0.79
PHGDH-233ENST00000642021 CCDC179H3BU77 68 aa10.12□□□□□ -0.79
PHGDH-233ENST00000642021 H7C2G1 150 aa10.12□□□□□ -0.79
PHGDH-233ENST00000642021 DEFB136Q30KP8 78 aa10.12□□□□□ -0.79
PHGDH-233ENST00000642021 TMEM263Q8WUH6 116 aaKnown RBP10.12□□□□□ -0.79
PHGDH-233ENST00000642021 TMEM89A2RUT3 159 aa10.11□□□□□ -0.79
PHGDH-233ENST00000642021 IGHV3-33P01772 117 aa10.11□□□□□ -0.79
PHGDH-233ENST00000642021 Q6ZSN1 163 aa10.11□□□□□ -0.79
PHGDH-233ENST00000642021 SBSPONQ8IVN8 264 aa10.11□□□□□ -0.79
PHGDH-233ENST00000642021 TRGV11A0A075B6L2 103 aa10.11□□□□□ -0.79
PHGDH-233ENST00000642021 TRBV20-1A0A075B6N2 111 aa10.11□□□□□ -0.79
PHGDH-233ENST00000642021 NHLRC4P0CG21 123 aaPredicted RBP10.11□□□□□ -0.79
PHGDH-233ENST00000642021 TEN1Q86WV5 123 aa10.11□□□□□ -0.79
PHGDH-233ENST00000642021 TRAV8-3A0A0A6YYJ7 113 aa10.1□□□□□ -0.79
PHGDH-233ENST00000642021 RBMY1BA6NDE4 496 aaKnown RBP10.1□□□□□ -0.79
PHGDH-233ENST00000642021 RBMY1EA6NEQ0 496 aaKnown RBP10.1□□□□□ -0.79
PHGDH-233ENST00000642021 RBMY1DP0C7P1 496 aaKnown RBP10.1□□□□□ -0.79
PHGDH-233ENST00000642021 DEFB131AP59861 70 aa10.1□□□□□ -0.79
PHGDH-233ENST00000642021 RNF152Q8N8N0 203 aa10.1□□□□□ -0.79
PHGDH-233ENST00000642021 CACNA1AO00555 2505 aa10.1□□□□□ -0.79
PHGDH-233ENST00000642021 A0A0J9YXY3 114 aa10.1□□□□□ -0.79
PHGDH-233ENST00000642021 ELANEP08246 267 aa10.1□□□□□ -0.79
PHGDH-233ENST00000642021 IGHV3-30-3P0DP02 117 aa10.1□□□□□ -0.79
PHGDH-233ENST00000642021 SLURP1P55000 103 aa10.1□□□□□ -0.79
PHGDH-233ENST00000642021 XGP55808 180 aa10.1□□□□□ -0.79
PHGDH-233ENST00000642021 LYRM7Q5U5X0 104 aa10.1□□□□□ -0.79
PHGDH-233ENST00000642021 Q6ZUT4 128 aa10.1□□□□□ -0.79
PHGDH-233ENST00000642021 LINC01356Q8N9X3 169 aa10.1□□□□□ -0.79
PHGDH-233ENST00000642021 ACACBO00763 2458 aa10.1□□□□□ -0.79
PHGDH-233ENST00000642021 A0A096LNT2 108 aa10.09□□□□□ -0.79
PHGDH-233ENST00000642021 ZNF702PQ9H963 129 aa10.09□□□□□ -0.79
PHGDH-233ENST00000642021 CD28P10747 220 aa10.09□□□□□ -0.79
PHGDH-233ENST00000642021 PPDPFLQ8WWR9 84 aa10.09□□□□□ -0.79
PHGDH-233ENST00000642021 BEX4Q9NWD9 120 aaPredicted RBP10.09□□□□□ -0.79
PHGDH-233ENST00000642021 A8MWV9 139 aa10.09□□□□□ -0.79
PHGDH-233ENST00000642021 A8MZ25 164 aa10.09□□□□□ -0.79
PHGDH-233ENST00000642021 M0R2P5 195 aa10.09□□□□□ -0.79
PHGDH-233ENST00000642021 HIST2H2BDQ6DRA6 164 aa10.09□□□□□ -0.79
PHGDH-233ENST00000642021 ANKRD29Q8N6D5 301 aa10.09□□□□□ -0.79
PHGDH-233ENST00000642021 UBE2E2Q96LR5 201 aa10.09□□□□□ -0.79
PHGDH-233ENST00000642021 ANKRD17O75179 2603 aaKnown RBP10.08□□□□□ -0.8
PHGDH-233ENST00000642021 LITAFQ99732 161 aa10.08□□□□□ -0.8
PHGDH-233ENST00000642021 SMIM9A6NGZ8 99 aa10.08□□□□□ -0.8
PHGDH-233ENST00000642021 MRPS36P82909 103 aaKnown RBP10.08□□□□□ -0.8
PHGDH-233ENST00000642021 ZFAND6Q6FIF0 208 aa10.08□□□□□ -0.8
PHGDH-233ENST00000642021 DUX3Q96PT4 197 aa10.08□□□□□ -0.8
PHGDH-233ENST00000642021 PYGO1Q9Y3Y4 419 aa10.08□□□□□ -0.8
PHGDH-233ENST00000642021 H3BMM0 161 aa10.07□□□□□ -0.8
PHGDH-233ENST00000642021 ADAMTSL4-AS1Q5T5F5 129 aa10.07□□□□□ -0.8
PHGDH-233ENST00000642021 MYO9AB2RTY4 2548 aa10.07□□□□□ -0.8
PHGDH-233ENST00000642021 FAM208BQ5VWN6 2430 aa10.06□□□□□ -0.8
PHGDH-233ENST00000642021 TEX15Q9BXT5 2789 aa10.06□□□□□ -0.8
PHGDH-233ENST00000642021 A0A0B4J2C4 111 aa10.06□□□□□ -0.8
PHGDH-233ENST00000642021 C9JAW5 83 aa10.06□□□□□ -0.8
PHGDH-233ENST00000642021 TEX29Q8N6K0 151 aa10.06□□□□□ -0.8
PHGDH-233ENST00000642021 TIMM21Q9BVV7 248 aa10.06□□□□□ -0.8
PHGDH-233ENST00000642021 EDA2RQ9HAV5 297 aa10.06□□□□□ -0.8
PHGDH-233ENST00000642021 SLC25A20O43772 301 aa10.06□□□□□ -0.8
PHGDH-233ENST00000642021 CHCHD7Q9BUK0 85 aa10.06□□□□□ -0.8
PHGDH-233ENST00000642021 NACAE9PAV3 2078 aa10.05□□□□□ -0.8
PHGDH-233ENST00000642021 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-233ENST00000642021 IGKV2-29A2NJV5 120 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-233ENST00000642021 Q6YL49 198 aa10.05□□□□□ -0.8
PHGDH-233ENST00000642021 PRRC2AP48634 2157 aaKnown RBP10.05□□□□□ -0.8
PHGDH-233ENST00000642021 IGHV3-38A0A0C4DH36 116 aa10.05□□□□□ -0.8
PHGDH-233ENST00000642021 PRSS2P07478 247 aa10.05□□□□□ -0.8
PHGDH-233ENST00000642021 DSCR9P59020 149 aa10.05□□□□□ -0.8
PHGDH-233ENST00000642021 TMEM61Q8N0U2 210 aa10.05□□□□□ -0.8
PHGDH-233ENST00000642021 PTPN13Q12923 2485 aa10.05□□□□□ -0.8
PHGDH-233ENST00000642021 ZNF469Q96JG9 3925 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-233ENST00000642021 IGHV1-58A0A0C4DH39 117 aa10.04□□□□□ -0.8
PHGDH-233ENST00000642021 Q6ZSV7 163 aa10.04□□□□□ -0.8
PHGDH-233ENST00000642021 UBE2D4Q9Y2X8 147 aa10.04□□□□□ -0.8
PHGDH-233ENST00000642021 A8MTW9 85 aa10.03□□□□□ -0.8
PHGDH-233ENST00000642021 Q1RN00 199 aa10.03□□□□□ -0.8
PHGDH-233ENST00000642021 ZFYVE26Q68DK2 2539 aa10.03□□□□□ -0.8
PHGDH-233ENST00000642021 NPC2P61916 151 aa10.03□□□□□ -0.8
PHGDH-233ENST00000642021 LINC00467Q9BRT7 94 aa10.03□□□□□ -0.8
PHGDH-233ENST00000642021 NDUFA12Q9UI09 145 aa10.03□□□□□ -0.8
PHGDH-233ENST00000642021 LRRK2Q5S007 2527 aa10.03□□□□□ -0.8
PHGDH-233ENST00000642021 AKAP9Q99996 3911 aa10.02□□□□□ -0.8
PHGDH-233ENST00000642021 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.02□□□□□ -0.81
PHGDH-233ENST00000642021 J3QLI3 93 aa10.02□□□□□ -0.81
PHGDH-233ENST00000642021 VSIG2Q96IQ7 327 aa10.02□□□□□ -0.81
PHGDH-233ENST00000642021 ABCA12Q86UK0 2595 aa10.02□□□□□ -0.81
PHGDH-233ENST00000642021 TRIAP1O43715 76 aa10.02□□□□□ -0.81
PHGDH-233ENST00000642021 FSHBP01225 129 aa10.02□□□□□ -0.81
PHGDH-233ENST00000642021 C11orf72Q8NBR9 251 aa10.02□□□□□ -0.81
PHGDH-233ENST00000642021 LINC01587Q99440 93 aa10.01□□□□□ -0.81
PHGDH-233ENST00000642021 TINCRA0A1B0GVN0 87 aa10.01□□□□□ -0.81
PHGDH-233ENST00000642021 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-233ENST00000642021 CHD6Q8TD26 2715 aa10.01□□□□□ -0.81
PHGDH-233ENST00000642021 NDUFV3P56181 108 aaKnown RBP10□□□□□ -0.81
PHGDH-233ENST00000642021 MAP6D1Q9H9H5 199 aa10□□□□□ -0.81
PHGDH-233ENST00000642021 TLN2Q9Y4G6 2542 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms