RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 C4orf3Q8WVX3 66 aa12.59□□□□□ -0.39
CACNA1A-258ENST00000638029 IGF1P05019 195 aa12.59□□□□□ -0.39
CACNA1A-258ENST00000638029 C11orf52Q96A22 123 aa12.59□□□□□ -0.39
CACNA1A-258ENST00000638029 LINC00173Q6ZV60 143 aa12.59□□□□□ -0.39
CACNA1A-258ENST00000638029 POM121L12Q8N7R1 296 aa12.59□□□□□ -0.39
CACNA1A-258ENST00000638029 C10orf105Q8TEF2 133 aa12.59□□□□□ -0.39
CACNA1A-258ENST00000638029 LRP4O75096 1905 aa12.58□□□□□ -0.39
CACNA1A-258ENST00000638029 IGKV2-28A0A075B6P5 120 aa12.58□□□□□ -0.39
CACNA1A-258ENST00000638029 IGKV2D-28P01615 120 aa12.58□□□□□ -0.39
CACNA1A-258ENST00000638029 ZNF503-AS2A6NEH8 195 aa12.58□□□□□ -0.4
CACNA1A-258ENST00000638029 ZFAND3Q9H8U3 227 aa12.58□□□□□ -0.4
CACNA1A-258ENST00000638029 SNURFQ9Y675 71 aa12.58□□□□□ -0.4
CACNA1A-258ENST00000638029 XAGE1AQ9HD64 81 aa12.58□□□□□ -0.4
CACNA1A-258ENST00000638029 ODF1Q14990 250 aa12.57□□□□□ -0.4
CACNA1A-258ENST00000638029 PROK2Q9HC23 129 aa12.57□□□□□ -0.4
CACNA1A-258ENST00000638029 SERP2Q8N6R1 65 aa12.57□□□□□ -0.4
CACNA1A-258ENST00000638029 ZNF747Q9BV97 191 aa12.57□□□□□ -0.4
CACNA1A-258ENST00000638029 H0YGX0 51 aa12.57□□□□□ -0.4
CACNA1A-258ENST00000638029 KIR2DL5BA0A0G2JN68 375 aa12.57□□□□□ -0.4
CACNA1A-258ENST00000638029 KIR2DL5BA0A0G2JPC4 375 aa12.57□□□□□ -0.4
CACNA1A-258ENST00000638029 KIR2DL5AQ8N109 375 aa12.57□□□□□ -0.4
CACNA1A-258ENST00000638029 LINC00482Q8N8I6 264 aa12.57□□□□□ -0.4
CACNA1A-258ENST00000638029 SPRNQ5BIV9 151 aa12.56□□□□□ -0.4
CACNA1A-258ENST00000638029 PIK3CD-AS1Q5SR53 167 aa12.56□□□□□ -0.4
CACNA1A-258ENST00000638029 FAM30AQ9NZY2 134 aa12.56□□□□□ -0.4
CACNA1A-258ENST00000638029 AGPAT4-IT1Q9H0P7 198 aa12.56□□□□□ -0.4
CACNA1A-258ENST00000638029 GPR179Q6PRD1 2367 aa12.56□□□□□ -0.4
CACNA1A-258ENST00000638029 IGLV2-11P01706 119 aa12.56□□□□□ -0.4
CACNA1A-258ENST00000638029 IGLC6P0CF74 106 aa12.55□□□□□ -0.4
CACNA1A-258ENST00000638029 KAAG1Q9UBP8 84 aa12.55□□□□□ -0.4
CACNA1A-258ENST00000638029 ENHOQ6UWT2 76 aa12.54□□□□□ -0.4
CACNA1A-258ENST00000638029 WFDC13Q8IUB5 93 aa12.54□□□□□ -0.4
CACNA1A-258ENST00000638029 H3BQ85 93 aa12.54□□□□□ -0.4
CACNA1A-258ENST00000638029 CXCL5P42830 114 aa12.54□□□□□ -0.4
CACNA1A-258ENST00000638029 MT-ATP8P03928 68 aa12.54□□□□□ -0.4
CACNA1A-258ENST00000638029 MSRB1Q9NZV6 116 aa12.54□□□□□ -0.4
CACNA1A-258ENST00000638029 RPL37AP8A6NKH3 93 aa12.54□□□□□ -0.4
CACNA1A-258ENST00000638029 SLX1AQ9BQ83 275 aa12.54□□□□□ -0.4
CACNA1A-258ENST00000638029 ODF3L1Q8IXM7 274 aa12.54□□□□□ -0.4
CACNA1A-258ENST00000638029 PLA2G2CQ5R387 149 aa12.54□□□□□ -0.4
CACNA1A-258ENST00000638029 FAM215AQ9Y5M1 114 aa12.54□□□□□ -0.4
CACNA1A-258ENST00000638029 U3KQA8 63 aa12.53□□□□□ -0.4
CACNA1A-258ENST00000638029 JMJD7-PLA2G4BH0Y9G9 81 aa12.53□□□□□ -0.4
CACNA1A-258ENST00000638029 Q6Q795 121 aa12.53□□□□□ -0.4
CACNA1A-258ENST00000638029 SPINK1P00995 79 aa12.53□□□□□ -0.4
CACNA1A-258ENST00000638029 CTSZQ9UBR2 303 aa12.52□□□□□ -0.4
CACNA1A-258ENST00000638029 C5orf56Q8N8D9 126 aa12.52□□□□□ -0.41
CACNA1A-258ENST00000638029 MDFICQ9P1T7 246 aa12.52□□□□□ -0.41
CACNA1A-258ENST00000638029 FAM222AQ5U5X8 452 aa12.52□□□□□ -0.41
CACNA1A-258ENST00000638029 NFE4Q86UQ8 179 aa12.52□□□□□ -0.41
CACNA1A-258ENST00000638029 LENEPQ9Y5L5 61 aa12.51□□□□□ -0.41
CACNA1A-258ENST00000638029 REG3AQ06141 175 aa12.51□□□□□ -0.41
CACNA1A-258ENST00000638029 LINC01545Q5VT33 79 aa12.51□□□□□ -0.41
CACNA1A-258ENST00000638029 NUPR2A6NF83 97 aa12.51□□□□□ -0.41
CACNA1A-258ENST00000638029 MYCNOSP40205 109 aa12.5□□□□□ -0.41
CACNA1A-258ENST00000638029 C10orf91Q5T1B1 145 aa12.5□□□□□ -0.41
CACNA1A-258ENST00000638029 TTTY13Q9BZ97 58 aa12.5□□□□□ -0.41
CACNA1A-258ENST00000638029 TCL1BO95988 128 aa12.5□□□□□ -0.41
CACNA1A-258ENST00000638029 UQCRQO14949 82 aa12.49□□□□□ -0.41
CACNA1A-258ENST00000638029 LINC00526Q96FQ7 95 aa12.49□□□□□ -0.41
CACNA1A-258ENST00000638029 PRO0255Q9UI72 69 aa12.49□□□□□ -0.41
CACNA1A-258ENST00000638029 PTPRSQ13332 1948 aa12.49□□□□□ -0.41
CACNA1A-258ENST00000638029 NUPR1O60356 82 aa12.48□□□□□ -0.41
CACNA1A-258ENST00000638029 WT1P19544 449 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-258ENST00000638029 HIVEP3Q5T1R4 2406 aa12.48□□□□□ -0.41
CACNA1A-258ENST00000638029 TIMM17BO60830 172 aa12.48□□□□□ -0.41
CACNA1A-258ENST00000638029 PIP4P1Q86T03 277 aa12.48□□□□□ -0.41
CACNA1A-258ENST00000638029 MED14OSP0DP75 135 aa12.48□□□□□ -0.41
CACNA1A-258ENST00000638029 NANOS2P60321 138 aaKnown RBP12.48□□□□□ -0.41
CACNA1A-258ENST00000638029 CUL9Q8IWT3 2517 aa12.47□□□□□ -0.41
CACNA1A-258ENST00000638029 IGHV1-58A0A0C4DH39 117 aa12.47□□□□□ -0.41
CACNA1A-258ENST00000638029 SERTAD4-AS1Q5TG53 156 aa12.47□□□□□ -0.41
CACNA1A-258ENST00000638029 NDUFA11Q86Y39 141 aa12.47□□□□□ -0.41
CACNA1A-258ENST00000638029 IGHV7-81A0A0B4J1V7 117 aa12.47□□□□□ -0.41
CACNA1A-258ENST00000638029 CPAMD8Q8IZJ3 1885 aa12.47□□□□□ -0.41
CACNA1A-258ENST00000638029 TP53TG3Q9ULZ0 132 aa12.46□□□□□ -0.41
CACNA1A-258ENST00000638029 ADORA2A-AS1P86434 159 aa12.45□□□□□ -0.42
CACNA1A-258ENST00000638029 PMAIP1Q13794 54 aa12.45□□□□□ -0.42
CACNA1A-258ENST00000638029 FSHBP01225 129 aa12.45□□□□□ -0.42
CACNA1A-258ENST00000638029 PRAC2D3DTV9 90 aa12.45□□□□□ -0.42
CACNA1A-258ENST00000638029 C16orf54Q6UWD8 224 aa12.44□□□□□ -0.42
CACNA1A-258ENST00000638029 LINC00643Q86TS7 51 aa12.44□□□□□ -0.42
CACNA1A-258ENST00000638029 LY6LH3BQJ8 138 aa12.44□□□□□ -0.42
CACNA1A-258ENST00000638029 LY6G6DO95868 133 aa12.44□□□□□ -0.42
CACNA1A-258ENST00000638029 A6NDX4 124 aa12.42□□□□□ -0.42
CACNA1A-258ENST00000638029 C22orf34Q6ZV56 151 aa12.42□□□□□ -0.42
CACNA1A-258ENST00000638029 CHCHD10Q8WYQ3 142 aaPredicted RBP12.42□□□□□ -0.42
CACNA1A-258ENST00000638029 INSL3P51460 131 aa12.42□□□□□ -0.42
CACNA1A-258ENST00000638029 RSPO1Q2MKA7 263 aaPredicted RBP12.42□□□□□ -0.42
CACNA1A-258ENST00000638029 MAP6D1Q9H9H5 199 aa12.42□□□□□ -0.42
CACNA1A-258ENST00000638029 PLA2G2EQ9NZK7 142 aa12.42□□□□□ -0.42
CACNA1A-258ENST00000638029 PLAC8L1A1L4L8 177 aa12.41□□□□□ -0.42
CACNA1A-258ENST00000638029 C20orf173Q96LM9 149 aa12.41□□□□□ -0.42
CACNA1A-258ENST00000638029 TRBV6-1A0A0K0K1D8 114 aa12.4□□□□□ -0.42
CACNA1A-258ENST00000638029 Q8N9L7 120 aa12.4□□□□□ -0.42
CACNA1A-258ENST00000638029 COA6Q5JTJ3 125 aaKnown RBP12.4□□□□□ -0.42
CACNA1A-258ENST00000638029 IGLV11-55A0A075B6I3 123 aa12.39□□□□□ -0.43
CACNA1A-258ENST00000638029 TMEM89A2RUT3 159 aa12.39□□□□□ -0.43
CACNA1A-258ENST00000638029 Q6ZTI0 123 aa12.39□□□□□ -0.43
CACNA1A-258ENST00000638029 TOMM6Q96B49 74 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms