RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 HIST1H2BAQ96A08 127 aa4.27□□□□□ -1.73
LINC00963-218ENST00000624138 SMIM3Q9BZL3 60 aa4.27□□□□□ -1.73
LINC00963-218ENST00000624138 NUDT15Q9NV35 164 aa4.27□□□□□ -1.73
LINC00963-218ENST00000624138 LYRM1O43325 122 aa4.26□□□□□ -1.73
LINC00963-218ENST00000624138 NOL3O60936 208 aaKnown RBP4.26□□□□□ -1.73
LINC00963-218ENST00000624138 SIX6O95475 246 aa4.26□□□□□ -1.73
LINC00963-218ENST00000624138 H2AFB2P0C5Z0 115 aa4.26□□□□□ -1.73
LINC00963-218ENST00000624138 SMIM17P0DL12 118 aa4.26□□□□□ -1.73
LINC00963-218ENST00000624138 IL7P13232 177 aa4.26□□□□□ -1.73
LINC00963-218ENST00000624138 EIF5AP63241 154 aaKnown RBP4.26□□□□□ -1.73
LINC00963-218ENST00000624138 SRSF3P84103 164 aaKnown RBP4.26□□□□□ -1.73
LINC00963-218ENST00000624138 SPANXN1Q5VSR9 72 aa4.26□□□□□ -1.73
LINC00963-218ENST00000624138 RPP21Q9H633 154 aaKnown RBP4.26□□□□□ -1.73
LINC00963-218ENST00000624138 A0A087WZ39 114 aa4.25□□□□□ -1.73
LINC00963-218ENST00000624138 MUC21A0A140T8X8 626 aa4.25□□□□□ -1.73
LINC00963-218ENST00000624138 KRTAP9-7A8MTY7 169 aa4.25□□□□□ -1.73
LINC00963-218ENST00000624138 LTAP01374 205 aa4.25□□□□□ -1.73
LINC00963-218ENST00000624138 BCL2P10415 239 aa4.25□□□□□ -1.73
LINC00963-218ENST00000624138 CAMPP49913 170 aa4.25□□□□□ -1.73
LINC00963-218ENST00000624138 NKX2-5P52952 324 aaPredicted RBP4.25□□□□□ -1.73
LINC00963-218ENST00000624138 SUMO4Q6EEV6 95 aa4.25□□□□□ -1.73
LINC00963-218ENST00000624138 NUP35Q8NFH5 326 aa4.25□□□□□ -1.73
LINC00963-218ENST00000624138 TSKUQ8WUA8 353 aa4.25□□□□□ -1.73
LINC00963-218ENST00000624138 ISOC2Q96AB3 205 aa4.25□□□□□ -1.73
LINC00963-218ENST00000624138 FMC1Q96HJ9 113 aa4.25□□□□□ -1.73
LINC00963-218ENST00000624138 AP1S3Q96PC3 154 aa4.25□□□□□ -1.73
LINC00963-218ENST00000624138 MLST8Q9BVC4 326 aa4.25□□□□□ -1.73
LINC00963-218ENST00000624138 NKX6-2Q9C056 277 aaPredicted RBP4.25□□□□□ -1.73
LINC00963-218ENST00000624138 IGLV4-69A0A075B6H9 119 aa4.24□□□□□ -1.73
LINC00963-218ENST00000624138 FAM74A7A6NL05 159 aa4.24□□□□□ -1.73
LINC00963-218ENST00000624138 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.24□□□□□ -1.73
LINC00963-218ENST00000624138 H7C423 109 aa4.24□□□□□ -1.73
LINC00963-218ENST00000624138 APOMO95445 188 aa4.24□□□□□ -1.73
LINC00963-218ENST00000624138 MPC2O95563 127 aa4.24□□□□□ -1.73
LINC00963-218ENST00000624138 MEF2BQ02080 365 aaPredicted RBP4.24□□□□□ -1.73
LINC00963-218ENST00000624138 COTL1Q14019 142 aa4.24□□□□□ -1.73
LINC00963-218ENST00000624138 RASL11AQ6T310 242 aa4.24□□□□□ -1.73
LINC00963-218ENST00000624138 OR5A1Q8NGJ0 315 aa4.24□□□□□ -1.73
LINC00963-218ENST00000624138 PPP1R1CQ8WVI7 109 aa4.24□□□□□ -1.73
LINC00963-218ENST00000624138 PSMG3Q9BT73 122 aaPredicted RBP4.24□□□□□ -1.73
LINC00963-218ENST00000624138 MRPL18Q9H0U6 180 aaKnown RBP4.24□□□□□ -1.73
LINC00963-218ENST00000624138 NIT2Q9NQR4 276 aa4.24□□□□□ -1.73
LINC00963-218ENST00000624138 LINC00959A0A1B0GUT2 108 aa4.23□□□□□ -1.73
LINC00963-218ENST00000624138 CCL25O15444 150 aa4.23□□□□□ -1.73
LINC00963-218ENST00000624138 MBP02144 154 aa4.23□□□□□ -1.73
LINC00963-218ENST00000624138 ATP6V0CP27449 155 aa4.23□□□□□ -1.73
LINC00963-218ENST00000624138 XCL1P47992 114 aa4.23□□□□□ -1.73
LINC00963-218ENST00000624138 SSTP61278 116 aa4.23□□□□□ -1.73
LINC00963-218ENST00000624138 UBE2G1P62253 170 aa4.23□□□□□ -1.73
LINC00963-218ENST00000624138 SERF2P84101 59 aa4.23□□□□□ -1.73
LINC00963-218ENST00000624138 ACTR3CQ9C0K3 210 aaPredicted RBP4.23□□□□□ -1.73
LINC00963-218ENST00000624138 MGPP08493 103 aa4.22□□□□□ -1.73
LINC00963-218ENST00000624138 H2BFSP57053 126 aa4.22□□□□□ -1.73
LINC00963-218ENST00000624138 DEFA3P59666 94 aa4.22□□□□□ -1.73
LINC00963-218ENST00000624138 UBE2G2P60604 165 aa4.22□□□□□ -1.73
LINC00963-218ENST00000624138 RNF151Q2KHN1 245 aa4.22□□□□□ -1.73
LINC00963-218ENST00000624138 AMMECR1LQ6DCA0 310 aa4.22□□□□□ -1.73
LINC00963-218ENST00000624138 CD164L2Q6UWJ8 174 aa4.22□□□□□ -1.73
LINC00963-218ENST00000624138 C2orf48Q96LS8 159 aa4.22□□□□□ -1.73
LINC00963-218ENST00000624138 TNFSF18Q9UNG2 199 aa4.22□□□□□ -1.73
LINC00963-218ENST00000624138 A0A087X002 238 aa4.21□□□□□ -1.74
LINC00963-218ENST00000624138 NCR2O95944 276 aa4.21□□□□□ -1.74
LINC00963-218ENST00000624138 PET100P0DJ07 73 aa4.21□□□□□ -1.74
LINC00963-218ENST00000624138 CRYGAP11844 174 aa4.21□□□□□ -1.74
LINC00963-218ENST00000624138 ZNF25P17030 456 aaPredicted RBP4.21□□□□□ -1.74
LINC00963-218ENST00000624138 NTF3P20783 257 aa4.21□□□□□ -1.74
LINC00963-218ENST00000624138 RPL18AQ02543 176 aaKnown RBP4.21□□□□□ -1.74
LINC00963-218ENST00000624138 ZNF726P1Q15940 193 aa4.21□□□□□ -1.74
LINC00963-218ENST00000624138 RNASEKQ6P5S7 137 aaKnown RBP4.21□□□□□ -1.74
LINC00963-218ENST00000624138 CAMK2N2Q96S95 79 aa4.21□□□□□ -1.74
LINC00963-218ENST00000624138 RETNLBQ9BQ08 111 aa4.21□□□□□ -1.74
LINC00963-218ENST00000624138 KRTAP4-1Q9BYQ7 146 aa4.21□□□□□ -1.74
LINC00963-218ENST00000624138 IGLV7-46A0A075B6I9 117 aa4.2□□□□□ -1.74
LINC00963-218ENST00000624138 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.2□□□□□ -1.74
LINC00963-218ENST00000624138 FAM240BA0A1B0GVZ2 78 aa4.2□□□□□ -1.74
LINC00963-218ENST00000624138 FAM168BA1KXE4 195 aa4.2□□□□□ -1.74
LINC00963-218ENST00000624138 IGKV2-29A2NJV5 120 aaPredicted RBP4.2□□□□□ -1.74
LINC00963-218ENST00000624138 CCDC160A6NGH7 325 aa4.2□□□□□ -1.74
LINC00963-218ENST00000624138 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.2□□□□□ -1.74
LINC00963-218ENST00000624138 BCL2L11O43521 198 aa4.2□□□□□ -1.74
LINC00963-218ENST00000624138 ZNF861PO60384 105 aa4.2□□□□□ -1.74
LINC00963-218ENST00000624138 ESDP10768 282 aa4.2□□□□□ -1.74
LINC00963-218ENST00000624138 SS18Q15532 418 aa4.2□□□□□ -1.74
LINC00963-218ENST00000624138 Q6ZNX1 250 aa4.2□□□□□ -1.74
LINC00963-218ENST00000624138 KRTAP7-1Q8IUC3 87 aa4.2□□□□□ -1.74
LINC00963-218ENST00000624138 TYMSOSQ8TAI1 123 aa4.2□□□□□ -1.74
LINC00963-218ENST00000624138 OPRPNQ99935 248 aaPredicted RBP4.2□□□□□ -1.74
LINC00963-218ENST00000624138 TCEAL7Q9BRU2 100 aa4.2□□□□□ -1.74
LINC00963-218ENST00000624138 CTXND1A0A1B0GTU2 59 aa4.19□□□□□ -1.74
LINC00963-218ENST00000624138 C19orf71A6NCJ1 209 aa4.19□□□□□ -1.74
LINC00963-218ENST00000624138 IGLC6P0CF74 106 aa4.19□□□□□ -1.74
LINC00963-218ENST00000624138 FHITP49789 147 aa4.19□□□□□ -1.74
LINC00963-218ENST00000624138 ASB16-AS1Q495Z4 193 aa4.19□□□□□ -1.74
LINC00963-218ENST00000624138 EIF5AL1Q6IS14 154 aaKnown RBP4.19□□□□□ -1.74
LINC00963-218ENST00000624138 G3V3Q6 166 aa4.18□□□□□ -1.74
LINC00963-218ENST00000624138 APCSP02743 223 aa4.18□□□□□ -1.74
LINC00963-218ENST00000624138 S100A9P06702 114 aaKnown RBP4.18□□□□□ -1.74
LINC00963-218ENST00000624138 TLX1NBP0CAT3 122 aa4.18□□□□□ -1.74
LINC00963-218ENST00000624138 AKR1C3P42330 323 aa4.18□□□□□ -1.74
LINC00963-218ENST00000624138 CTAG1AP78358 180 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms