RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 TMEM97Q5BJF2 176 aa8.07□□□□□ -1.12
CTSA-210ENST00000606000 WDR73Q6P4I2 378 aa8.07□□□□□ -1.12
CTSA-210ENST00000606000 RPL39LQ96EH5 51 aaKnown RBP8.07□□□□□ -1.12
CTSA-210ENST00000606000 NIT2Q9NQR4 276 aa8.07□□□□□ -1.12
CTSA-210ENST00000606000 NAT8Q9UHE5 227 aa8.07□□□□□ -1.12
CTSA-210ENST00000606000 EPM2AB3EWF7 344 aa8.06□□□□□ -1.12
CTSA-210ENST00000606000 HLA-DQA1P01909 254 aa8.06□□□□□ -1.12
CTSA-210ENST00000606000 Q0VG73 95 aa8.06□□□□□ -1.12
CTSA-210ENST00000606000 FAM74A3Q4VXF1 159 aa8.06□□□□□ -1.12
CTSA-210ENST00000606000 Q5VSD8 79 aa8.06□□□□□ -1.12
CTSA-210ENST00000606000 SLC7A5P1Q8MH63 180 aa8.06□□□□□ -1.12
CTSA-210ENST00000606000 LINC00269Q8N2A0 174 aa8.06□□□□□ -1.12
CTSA-210ENST00000606000 C1orf43Q9BWL3 253 aa8.06□□□□□ -1.12
CTSA-210ENST00000606000 GFRA4Q9GZZ7 299 aa8.06□□□□□ -1.12
CTSA-210ENST00000606000 COX11Q9Y6N1 276 aa8.06□□□□□ -1.12
CTSA-210ENST00000606000 IGLV4-60A0A075B6I1 120 aa8.05□□□□□ -1.12
CTSA-210ENST00000606000 GAS8-AS1O95177 125 aa8.05□□□□□ -1.12
CTSA-210ENST00000606000 ISOC2Q96AB3 205 aa8.05□□□□□ -1.12
CTSA-210ENST00000606000 TMEM70Q9BUB7 260 aa8.05□□□□□ -1.12
CTSA-210ENST00000606000 PRR34Q9NV39 138 aa8.05□□□□□ -1.12
CTSA-210ENST00000606000 FAT1Q14517 4588 aa8.04□□□□□ -1.12
CTSA-210ENST00000606000 DNAH8Q96JB1 4490 aa8.04□□□□□ -1.12
CTSA-210ENST00000606000 A8MWL6 223 aa8.04□□□□□ -1.12
CTSA-210ENST00000606000 ADCYAP1P18509 176 aa8.04□□□□□ -1.12
CTSA-210ENST00000606000 CT83Q5H943 113 aa8.04□□□□□ -1.12
CTSA-210ENST00000606000 KRTAP26-1Q6PEX3 210 aa8.04□□□□□ -1.12
CTSA-210ENST00000606000 C20orf203Q8NBC4 194 aa8.04□□□□□ -1.12
CTSA-210ENST00000606000 TMEM243Q9BU79 118 aa8.04□□□□□ -1.12
CTSA-210ENST00000606000 IGLV10-54A0A075B6I4 117 aa8.03□□□□□ -1.12
CTSA-210ENST00000606000 LINC00862A6NCI5 91 aa8.03□□□□□ -1.12
CTSA-210ENST00000606000 HIGD1CA8MV81 97 aa8.03□□□□□ -1.12
CTSA-210ENST00000606000 AMTP48728 403 aa8.03□□□□□ -1.12
CTSA-210ENST00000606000 PKIAP61925 76 aa8.03□□□□□ -1.12
CTSA-210ENST00000606000 MIAQ16674 131 aa8.03□□□□□ -1.12
CTSA-210ENST00000606000 OSTCQ9NRP0 149 aa8.03□□□□□ -1.12
CTSA-210ENST00000606000 V9GYV3 84 aa8.03□□□□□ -1.12
CTSA-210ENST00000606000 USP17L23D6RBM5 183 aa8.02□□□□□ -1.13
CTSA-210ENST00000606000 REG3AQ06141 175 aa8.02□□□□□ -1.13
CTSA-210ENST00000606000 COTL1Q14019 142 aa8.02□□□□□ -1.13
CTSA-210ENST00000606000 LCE2CQ5TA81 110 aa8.02□□□□□ -1.13
CTSA-210ENST00000606000 UQCC3Q6UW78 93 aa8.02□□□□□ -1.13
CTSA-210ENST00000606000 Q6ZSA8 131 aa8.02□□□□□ -1.13
CTSA-210ENST00000606000 TSKUQ8WUA8 353 aa8.02□□□□□ -1.13
CTSA-210ENST00000606000 TMEM218A2RU14 115 aa8.01□□□□□ -1.13
CTSA-210ENST00000606000 F8W036 122 aa8.01□□□□□ -1.13
CTSA-210ENST00000606000 SMIM15Q7Z3B0 74 aa8.01□□□□□ -1.13
CTSA-210ENST00000606000 FRZBQ92765 325 aa8.01□□□□□ -1.13
CTSA-210ENST00000606000 RNF185Q96GF1 192 aa8.01□□□□□ -1.13
CTSA-210ENST00000606000 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8□□□□□ -1.13
CTSA-210ENST00000606000 A0A1B0GUT8 65 aa8□□□□□ -1.13
CTSA-210ENST00000606000 IGKV2-29A2NJV5 120 aaPredicted RBP8□□□□□ -1.13
CTSA-210ENST00000606000 UBE2L6O14933 153 aa8□□□□□ -1.13
CTSA-210ENST00000606000 RPS10P46783 165 aaKnown RBP8□□□□□ -1.13
CTSA-210ENST00000606000 AMN1Q8IY45 258 aa8□□□□□ -1.13
CTSA-210ENST00000606000 BORCS7Q96B45 105 aa8□□□□□ -1.13
CTSA-210ENST00000606000 SDHAF1A6NFY7 115 aa7.99□□□□□ -1.13
CTSA-210ENST00000606000 NCR2O95944 276 aa7.99□□□□□ -1.13
CTSA-210ENST00000606000 PRSS1P07477 247 aa7.99□□□□□ -1.13
CTSA-210ENST00000606000 NUP35Q8NFH5 326 aa7.99□□□□□ -1.13
CTSA-210ENST00000606000 IGKV3OR2-268A0A0C4DH90 116 aa7.98□□□□□ -1.13
CTSA-210ENST00000606000 A0A1B0GUV1 79 aa7.98□□□□□ -1.13
CTSA-210ENST00000606000 SMKR1H3BMG3 65 aa7.98□□□□□ -1.13
CTSA-210ENST00000606000 INAFM2P0DMQ5 153 aa7.98□□□□□ -1.13
CTSA-210ENST00000606000 RAB4AP20338 218 aa7.98□□□□□ -1.13
CTSA-210ENST00000606000 SCXQ7RTU7 201 aa7.98□□□□□ -1.13
CTSA-210ENST00000606000 TMEM191AQ9H0A3 160 aa7.98□□□□□ -1.13
CTSA-210ENST00000606000 TRBV6-5A0A0K0K1A5 114 aa7.97□□□□□ -1.13
CTSA-210ENST00000606000 FAM231BA6NCW3 169 aa7.97□□□□□ -1.13
CTSA-210ENST00000606000 TSHBP01222 138 aa7.97□□□□□ -1.13
CTSA-210ENST00000606000 APCSP02743 223 aa7.97□□□□□ -1.13
CTSA-210ENST00000606000 C14orf177Q52M58 125 aa7.97□□□□□ -1.13
CTSA-210ENST00000606000 TMEM242Q9NWH2 141 aa7.97□□□□□ -1.13
CTSA-210ENST00000606000 PNRC1Q12796 327 aaPredicted RBP7.96□□□□□ -1.14
CTSA-210ENST00000606000 RNASEKQ6P5S7 137 aaKnown RBP7.96□□□□□ -1.14
CTSA-210ENST00000606000 SEC11CQ9BY50 192 aa7.96□□□□□ -1.14
CTSA-210ENST00000606000 SMIM27A0A1W2PRY6 76 aa7.95□□□□□ -1.14
CTSA-210ENST00000606000 FAM229AH3BQW9 127 aa7.95□□□□□ -1.14
CTSA-210ENST00000606000 I3L3M4 83 aa7.95□□□□□ -1.14
CTSA-210ENST00000606000 FGF6P10767 208 aa7.95□□□□□ -1.14
CTSA-210ENST00000606000 PMCHP20382 165 aa7.95□□□□□ -1.14
CTSA-210ENST00000606000 RIGQ13278 110 aa7.95□□□□□ -1.14
CTSA-210ENST00000606000 AMMECR1LQ6DCA0 310 aa7.95□□□□□ -1.14
CTSA-210ENST00000606000 LINC00528Q8N1L1 170 aa7.95□□□□□ -1.14
CTSA-210ENST00000606000 ST20Q9HBF5 79 aa7.95□□□□□ -1.14
CTSA-210ENST00000606000 NAT8BQ9UHF3 227 aa7.95□□□□□ -1.14
CTSA-210ENST00000606000 TRAV8-4A0A0B4J246 113 aa7.94□□□□□ -1.14
CTSA-210ENST00000606000 GAGE12HA6NDE8 117 aa7.94□□□□□ -1.14
CTSA-210ENST00000606000 MT-ND4LP03901 98 aa7.94□□□□□ -1.14
CTSA-210ENST00000606000 MRPL54Q6P161 138 aaKnown RBP7.94□□□□□ -1.14
CTSA-210ENST00000606000 NRACQ8N912 160 aa7.94□□□□□ -1.14
CTSA-210ENST00000606000 CIRBP-AS1Q8TBR5 109 aa7.94□□□□□ -1.14
CTSA-210ENST00000606000 MRAP2Q96G30 205 aa7.94□□□□□ -1.14
CTSA-210ENST00000606000 hDV102S1A0JD36 115 aa7.93□□□□□ -1.14
CTSA-210ENST00000606000 PANO1I0J062 215 aa7.93□□□□□ -1.14
CTSA-210ENST00000606000 PPP1R2P9O14990 202 aa7.93□□□□□ -1.14
CTSA-210ENST00000606000 ESDP10768 282 aa7.93□□□□□ -1.14
CTSA-210ENST00000606000 CAMPP49913 170 aa7.93□□□□□ -1.14
CTSA-210ENST00000606000 POLR2KP53803 58 aaKnown RBP7.93□□□□□ -1.14
CTSA-210ENST00000606000 C10orf91Q5T1B1 145 aa7.93□□□□□ -1.14
CTSA-210ENST00000606000 CHAC1Q9BUX1 264 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms