RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 GAGE6Q13070 117 aa8.79□□□□□ -1
SRRM1-223ENST00000600523 MRPL51Q4U2R6 128 aaKnown RBP8.79□□□□□ -1
SRRM1-223ENST00000600523 NTM-AS1Q6ZSK4 140 aa8.79□□□□□ -1
SRRM1-223ENST00000600523 SVBPQ8N300 66 aa8.79□□□□□ -1
SRRM1-223ENST00000600523 KIR2DL4Q99706 377 aa8.79□□□□□ -1
SRRM1-223ENST00000600523 RPS10P5Q9NQ39 176 aa8.79□□□□□ -1
SRRM1-223ENST00000600523 KLK12Q9UKR0 248 aa8.79□□□□□ -1
SRRM1-223ENST00000600523 DNAH6Q9C0G6 4158 aa8.79□□□□□ -1
SRRM1-223ENST00000600523 C7orf77A4D0Y5 90 aa8.78□□□□□ -1
SRRM1-223ENST00000600523 TCAPO15273 167 aa8.78□□□□□ -1
SRRM1-223ENST00000600523 APOC3P02656 99 aa8.78□□□□□ -1
SRRM1-223ENST00000600523 FCER1GP30273 86 aa8.78□□□□□ -1
SRRM1-223ENST00000600523 SUMO2P61956 95 aaKnown RBP8.78□□□□□ -1
SRRM1-223ENST00000600523 SMAGPQ0VAQ4 97 aa8.78□□□□□ -1
SRRM1-223ENST00000600523 AMMECR1LQ6DCA0 310 aa8.78□□□□□ -1
SRRM1-223ENST00000600523 ORMDL3Q8N138 153 aa8.78□□□□□ -1
SRRM1-223ENST00000600523 CLRN3Q8NCR9 226 aa8.78□□□□□ -1
SRRM1-223ENST00000600523 C20orf78Q9BR46 151 aa8.78□□□□□ -1
SRRM1-223ENST00000600523 TMEM70Q9BUB7 260 aa8.78□□□□□ -1
SRRM1-223ENST00000600523 SMKR1H3BMG3 65 aa8.77□□□□□ -1.01
SRRM1-223ENST00000600523 H7C423 109 aa8.77□□□□□ -1.01
SRRM1-223ENST00000600523 TNP2Q05952 138 aa8.77□□□□□ -1.01
SRRM1-223ENST00000600523 MPV17L2Q567V2 206 aa8.77□□□□□ -1.01
SRRM1-223ENST00000600523 ATRAIDQ6UW56 229 aa8.77□□□□□ -1.01
SRRM1-223ENST00000600523 UBE2WQ96B02 151 aa8.77□□□□□ -1.01
SRRM1-223ENST00000600523 TRBV27A0A0K0K1C4 114 aa8.76□□□□□ -1.01
SRRM1-223ENST00000600523 D6R8Y8 96 aa8.76□□□□□ -1.01
SRRM1-223ENST00000600523 PHOX2AO14813 284 aa8.76□□□□□ -1.01
SRRM1-223ENST00000600523 RPS10P46783 165 aaKnown RBP8.76□□□□□ -1.01
SRRM1-223ENST00000600523 COX19Q49B96 90 aa8.76□□□□□ -1.01
SRRM1-223ENST00000600523 TRBV24-1A0A075B6N3 115 aa8.75□□□□□ -1.01
SRRM1-223ENST00000600523 A0A1B0GUV1 79 aa8.75□□□□□ -1.01
SRRM1-223ENST00000600523 TNFRSF6BO95407 300 aa8.75□□□□□ -1.01
SRRM1-223ENST00000600523 POLR2KP53803 58 aaKnown RBP8.75□□□□□ -1.01
SRRM1-223ENST00000600523 RBX1P62877 108 aa8.75□□□□□ -1.01
SRRM1-223ENST00000600523 TMEM136Q6ZRR5 245 aa8.75□□□□□ -1.01
SRRM1-223ENST00000600523 Q8N3U1 123 aa8.75□□□□□ -1.01
SRRM1-223ENST00000600523 NRACQ8N912 160 aa8.75□□□□□ -1.01
SRRM1-223ENST00000600523 Q8N976 141 aa8.75□□□□□ -1.01
SRRM1-223ENST00000600523 DEFB104AQ8WTQ1 72 aa8.75□□□□□ -1.01
SRRM1-223ENST00000600523 TMEM18Q96B42 140 aa8.75□□□□□ -1.01
SRRM1-223ENST00000600523 TMEM101Q96IK0 257 aa8.75□□□□□ -1.01
SRRM1-223ENST00000600523 C1orf43Q9BWL3 253 aa8.75□□□□□ -1.01
SRRM1-223ENST00000600523 LAMTOR2Q9Y2Q5 125 aa8.75□□□□□ -1.01
SRRM1-223ENST00000600523 IGKV2D-24A0A075B6R9 120 aa8.74□□□□□ -1.01
SRRM1-223ENST00000600523 GAS8-AS1O95177 125 aa8.74□□□□□ -1.01
SRRM1-223ENST00000600523 MIAQ16674 131 aa8.74□□□□□ -1.01
SRRM1-223ENST00000600523 RNASEKQ6P5S7 137 aaKnown RBP8.74□□□□□ -1.01
SRRM1-223ENST00000600523 PRELID3AQ96N28 172 aa8.74□□□□□ -1.01
SRRM1-223ENST00000600523 HLA-DQA1P01909 254 aa8.73□□□□□ -1.01
SRRM1-223ENST00000600523 ZNF25P17030 456 aaPredicted RBP8.73□□□□□ -1.01
SRRM1-223ENST00000600523 RPL32P62910 135 aaKnown RBP8.73□□□□□ -1.01
SRRM1-223ENST00000600523 Q6ZRN7 208 aaPredicted RBP8.73□□□□□ -1.01
SRRM1-223ENST00000600523 MAP1LC3AQ9H492 121 aa8.73□□□□□ -1.01
SRRM1-223ENST00000600523 TSHBP01222 138 aa8.72□□□□□ -1.01
SRRM1-223ENST00000600523 RAB5AP20339 215 aa8.72□□□□□ -1.01
SRRM1-223ENST00000600523 DGAT2L7PQ6IED9 249 aa8.72□□□□□ -1.01
SRRM1-223ENST00000600523 LINC00269Q8N2A0 174 aa8.72□□□□□ -1.01
SRRM1-223ENST00000600523 SMIM2Q9BVW6 85 aa8.72□□□□□ -1.01
SRRM1-223ENST00000600523 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.71□□□□□ -1.02
SRRM1-223ENST00000600523 TRAV8-4A0A0B4J246 113 aa8.71□□□□□ -1.02
SRRM1-223ENST00000600523 IGKV2-29A2NJV5 120 aaPredicted RBP8.71□□□□□ -1.02
SRRM1-223ENST00000600523 MT-ND6P03923 174 aa8.71□□□□□ -1.02
SRRM1-223ENST00000600523 FGF6P10767 208 aa8.71□□□□□ -1.02
SRRM1-223ENST00000600523 REG3AQ06141 175 aa8.71□□□□□ -1.02
SRRM1-223ENST00000600523 OR5A1Q8NGJ0 315 aa8.71□□□□□ -1.02
SRRM1-223ENST00000600523 GNB1LQ9BYB4 327 aa8.71□□□□□ -1.02
SRRM1-223ENST00000600523 A0A087WTM6 91 aa8.7□□□□□ -1.02
SRRM1-223ENST00000600523 A0A1B0GVY2 172 aa8.7□□□□□ -1.02
SRRM1-223ENST00000600523 NPYP01303 97 aa8.7□□□□□ -1.02
SRRM1-223ENST00000600523 CLPSL2Q6UWE3 100 aa8.7□□□□□ -1.02
SRRM1-223ENST00000600523 PGPEP1Q9NXJ5 209 aa8.7□□□□□ -1.02
SRRM1-223ENST00000600523 ESDP10768 282 aa8.69□□□□□ -1.02
SRRM1-223ENST00000600523 ENHOQ6UWT2 76 aa8.69□□□□□ -1.02
SRRM1-223ENST00000600523 SPATA12Q7Z6I5 190 aa8.69□□□□□ -1.02
SRRM1-223ENST00000600523 C20orf203Q8NBC4 194 aa8.69□□□□□ -1.02
SRRM1-223ENST00000600523 PRR34Q9NV39 138 aa8.69□□□□□ -1.02
SRRM1-223ENST00000600523 IGLV4-60A0A075B6I1 120 aa8.68□□□□□ -1.02
SRRM1-223ENST00000600523 LOC389332A0A1B0GUA5 103 aa8.68□□□□□ -1.02
SRRM1-223ENST00000600523 C16orf90A8MZG2 172 aa8.68□□□□□ -1.02
SRRM1-223ENST00000600523 C14orf177Q52M58 125 aa8.68□□□□□ -1.02
SRRM1-223ENST00000600523 CDPF1Q6NVV7 123 aa8.68□□□□□ -1.02
SRRM1-223ENST00000600523 IGKV3OR2-268A0A0C4DH90 116 aa8.67□□□□□ -1.02
SRRM1-223ENST00000600523 K7EMI3 77 aa8.67□□□□□ -1.02
SRRM1-223ENST00000600523 G0S2P27469 103 aa8.67□□□□□ -1.02
SRRM1-223ENST00000600523 MRPL52Q86TS9 123 aaKnown RBP8.67□□□□□ -1.02
SRRM1-223ENST00000600523 DNAH10Q8IVF4 4471 aa8.67□□□□□ -1.02
SRRM1-223ENST00000600523 SLC7A5P1Q8MH63 180 aa8.67□□□□□ -1.02
SRRM1-223ENST00000600523 NTN5Q8WTR8 489 aaPredicted RBP8.67□□□□□ -1.02
SRRM1-223ENST00000600523 NXT2Q9NPJ8 142 aaKnown RBP8.67□□□□□ -1.02
SRRM1-223ENST00000600523 DNAH2Q9P225 4427 aa8.67□□□□□ -1.02
SRRM1-223ENST00000600523 FABP9Q0Z7S8 132 aa8.66□□□□□ -1.02
SRRM1-223ENST00000600523 IGLV10-54A0A075B6I4 117 aa8.65□□□□□ -1.02
SRRM1-223ENST00000600523 PRSS47A8MTI9 375 aa8.65□□□□□ -1.02
SRRM1-223ENST00000600523 ORMDL2Q53FV1 153 aa8.65□□□□□ -1.02
SRRM1-223ENST00000600523 ZNF664Q8N3J9 261 aa8.65□□□□□ -1.02
SRRM1-223ENST00000600523 Q8N814 137 aa8.65□□□□□ -1.02
SRRM1-223ENST00000600523 Q8N8P6 123 aa8.65□□□□□ -1.02
SRRM1-223ENST00000600523 BAALCQ8WXS3 180 aa8.65□□□□□ -1.02
SRRM1-223ENST00000600523 TIMM21Q9BVV7 248 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms