RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 C1orf43Q9BWL3 253 aa12.15□□□□□ -0.46
SHKBP1-202ENST00000593764 A0A1B0GUT8 65 aa12.14□□□□□ -0.47
SHKBP1-202ENST00000593764 CRPP02741 224 aa12.14□□□□□ -0.47
SHKBP1-202ENST00000593764 LINC00269Q8N2A0 174 aa12.14□□□□□ -0.47
SHKBP1-202ENST00000593764 SMDT1Q9H4I9 107 aa12.14□□□□□ -0.47
SHKBP1-202ENST00000593764 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.13□□□□□ -0.47
SHKBP1-202ENST00000593764 A0A1B0GUV1 79 aa12.13□□□□□ -0.47
SHKBP1-202ENST00000593764 GAS8-AS1O95177 125 aa12.13□□□□□ -0.47
SHKBP1-202ENST00000593764 COTL1Q14019 142 aa12.13□□□□□ -0.47
SHKBP1-202ENST00000593764 MIAQ16674 131 aa12.13□□□□□ -0.47
SHKBP1-202ENST00000593764 KRTAP26-1Q6PEX3 210 aa12.13□□□□□ -0.47
SHKBP1-202ENST00000593764 C20orf203Q8NBC4 194 aa12.13□□□□□ -0.47
SHKBP1-202ENST00000593764 NAT8Q9UHE5 227 aa12.13□□□□□ -0.47
SHKBP1-202ENST00000593764 IGLV4-60A0A075B6I1 120 aa12.12□□□□□ -0.47
SHKBP1-202ENST00000593764 ADIRFQ15847 76 aa12.12□□□□□ -0.47
SHKBP1-202ENST00000593764 CLPSL2Q6UWE3 100 aa12.12□□□□□ -0.47
SHKBP1-202ENST00000593764 NUP35Q8NFH5 326 aa12.12□□□□□ -0.47
SHKBP1-202ENST00000593764 BORCS7Q96B45 105 aa12.12□□□□□ -0.47
SHKBP1-202ENST00000593764 RNF185Q96GF1 192 aa12.12□□□□□ -0.47
SHKBP1-202ENST00000593764 TMEM70Q9BUB7 260 aa12.12□□□□□ -0.47
SHKBP1-202ENST00000593764 TMEM191AQ9H0A3 160 aa12.12□□□□□ -0.47
SHKBP1-202ENST00000593764 FAM30AQ9NZY2 134 aa12.12□□□□□ -0.47
SHKBP1-202ENST00000593764 AMTP48728 403 aa12.11□□□□□ -0.47
SHKBP1-202ENST00000593764 SDHAF1A6NFY7 115 aa12.1□□□□□ -0.47
SHKBP1-202ENST00000593764 HAMPP81172 84 aa12.1□□□□□ -0.47
SHKBP1-202ENST00000593764 TRBV6-5A0A0K0K1A5 114 aa12.09□□□□□ -0.47
SHKBP1-202ENST00000593764 RAB4AP20338 218 aa12.09□□□□□ -0.47
SHKBP1-202ENST00000593764 REG3AQ06141 175 aa12.09□□□□□ -0.47
SHKBP1-202ENST00000593764 VPS13BQ7Z7G8 4022 aa12.09□□□□□ -0.47
SHKBP1-202ENST00000593764 SMIM27A0A1W2PRY6 76 aa12.08□□□□□ -0.48
SHKBP1-202ENST00000593764 LINC01620Q4KN68 170 aa12.08□□□□□ -0.48
SHKBP1-202ENST00000593764 AMN1Q8IY45 258 aa12.08□□□□□ -0.48
SHKBP1-202ENST00000593764 UBE2L6O14933 153 aa12.07□□□□□ -0.48
SHKBP1-202ENST00000593764 NCR2O95944 276 aa12.07□□□□□ -0.48
SHKBP1-202ENST00000593764 RIGQ13278 110 aa12.07□□□□□ -0.48
SHKBP1-202ENST00000593764 Q6ZSA8 131 aa12.07□□□□□ -0.48
SHKBP1-202ENST00000593764 NAT8BQ9UHF3 227 aa12.07□□□□□ -0.48
SHKBP1-202ENST00000593764 USP17L23D6RBM5 183 aa12.06□□□□□ -0.48
SHKBP1-202ENST00000593764 HLA-DQA1P01909 254 aa12.06□□□□□ -0.48
SHKBP1-202ENST00000593764 RPS10P46783 165 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-202ENST00000593764 IGLV10-54A0A075B6I4 117 aa12.05□□□□□ -0.48
SHKBP1-202ENST00000593764 EPM2AB3EWF7 344 aa12.05□□□□□ -0.48
SHKBP1-202ENST00000593764 I3L3M4 83 aa12.05□□□□□ -0.48
SHKBP1-202ENST00000593764 SMR3BP02814 79 aaPredicted RBP12.05□□□□□ -0.48
SHKBP1-202ENST00000593764 POLR2KP53803 58 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-202ENST00000593764 C14orf177Q52M58 125 aa12.05□□□□□ -0.48
SHKBP1-202ENST00000593764 MRAP2Q96G30 205 aa12.05□□□□□ -0.48
SHKBP1-202ENST00000593764 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-202ENST00000593764 TRAV8-4A0A0B4J246 113 aa12.04□□□□□ -0.48
SHKBP1-202ENST00000593764 IGKV2-29A2NJV5 120 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-202ENST00000593764 PMCHP20382 165 aa12.04□□□□□ -0.48
SHKBP1-202ENST00000593764 ST20Q9HBF5 79 aa12.04□□□□□ -0.48
SHKBP1-202ENST00000593764 H7C423 109 aa12.03□□□□□ -0.48
SHKBP1-202ENST00000593764 TSHBP01222 138 aa12.03□□□□□ -0.48
SHKBP1-202ENST00000593764 APCSP02743 223 aa12.03□□□□□ -0.48
SHKBP1-202ENST00000593764 PRSS1P07477 247 aa12.03□□□□□ -0.48
SHKBP1-202ENST00000593764 TRBV27A0A0K0K1C4 114 aa12.02□□□□□ -0.49
SHKBP1-202ENST00000593764 SMKR1H3BMG3 65 aa12.02□□□□□ -0.49
SHKBP1-202ENST00000593764 ESDP10768 282 aa12.02□□□□□ -0.49
SHKBP1-202ENST00000593764 FGF6P10767 208 aa12.01□□□□□ -0.49
SHKBP1-202ENST00000593764 Q5VSD8 79 aa12.01□□□□□ -0.49
SHKBP1-202ENST00000593764 FAM104BQ5XKR9 115 aa12.01□□□□□ -0.49
SHKBP1-202ENST00000593764 NRACQ8N912 160 aa12.01□□□□□ -0.49
SHKBP1-202ENST00000593764 CAMPP49913 170 aa12□□□□□ -0.49
SHKBP1-202ENST00000593764 RAB14P61106 215 aa12□□□□□ -0.49
SHKBP1-202ENST00000593764 MRPL51Q4U2R6 128 aaKnown RBP12□□□□□ -0.49
SHKBP1-202ENST00000593764 AMMECR1LQ6DCA0 310 aa12□□□□□ -0.49
SHKBP1-202ENST00000593764 TMEM242Q9NWH2 141 aa12□□□□□ -0.49
SHKBP1-202ENST00000593764 SRRM2Q9UQ35 2752 aaKnown RBP11.99□□□□□ -0.49
SHKBP1-202ENST00000593764 RNASEKQ6P5S7 137 aaKnown RBP11.99□□□□□ -0.49
SHKBP1-202ENST00000593764 A0A1B0GW15 77 aa11.98□□□□□ -0.49
SHKBP1-202ENST00000593764 DGAT2L7PQ6IED9 249 aa11.98□□□□□ -0.49
SHKBP1-202ENST00000593764 A0A1B0GXF2 115 aa11.97□□□□□ -0.49
SHKBP1-202ENST00000593764 VCYO14598 125 aa11.97□□□□□ -0.49
SHKBP1-202ENST00000593764 PPP1R17O96001 155 aa11.97□□□□□ -0.49
SHKBP1-202ENST00000593764 SUMO2P61956 95 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-202ENST00000593764 CLLU1Q5K131 121 aa11.97□□□□□ -0.49
SHKBP1-202ENST00000593764 MRPL54Q6P161 138 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-202ENST00000593764 CLRN3Q8NCR9 226 aa11.97□□□□□ -0.49
SHKBP1-202ENST00000593764 IGKV3OR2-268A0A0C4DH90 116 aa11.96□□□□□ -0.49
SHKBP1-202ENST00000593764 ZNF25P17030 456 aaPredicted RBP11.96□□□□□ -0.49
SHKBP1-202ENST00000593764 LINC00862A6NCI5 91 aa11.95□□□□□ -0.5
SHKBP1-202ENST00000593764 FAM229AH3BQW9 127 aa11.95□□□□□ -0.5
SHKBP1-202ENST00000593764 HBBP68871 147 aa11.95□□□□□ -0.5
SHKBP1-202ENST00000593764 IFITM2Q01629 132 aa11.95□□□□□ -0.5
SHKBP1-202ENST00000593764 SCXQ7RTU7 201 aa11.95□□□□□ -0.5
SHKBP1-202ENST00000593764 C9orf163Q8N9P6 203 aa11.95□□□□□ -0.5
SHKBP1-202ENST00000593764 CHAC1Q9BUX1 264 aa11.95□□□□□ -0.5
SHKBP1-202ENST00000593764 TRBV24-1A0A075B6N3 115 aa11.94□□□□□ -0.5
SHKBP1-202ENST00000593764 GAGE12HA6NDE8 117 aa11.94□□□□□ -0.5
SHKBP1-202ENST00000593764 MRPL52Q86TS9 123 aaKnown RBP11.94□□□□□ -0.5
SHKBP1-202ENST00000593764 OR5A1Q8NGJ0 315 aa11.94□□□□□ -0.5
SHKBP1-202ENST00000593764 CHCHD10Q8WYQ3 142 aaPredicted RBP11.94□□□□□ -0.5
SHKBP1-202ENST00000593764 C7orf77A4D0Y5 90 aa11.93□□□□□ -0.5
SHKBP1-202ENST00000593764 PPP1R2P9O14990 202 aa11.93□□□□□ -0.5
SHKBP1-202ENST00000593764 SLPIP03973 132 aa11.93□□□□□ -0.5
SHKBP1-202ENST00000593764 CKS2P33552 79 aa11.93□□□□□ -0.5
SHKBP1-202ENST00000593764 PNRC1Q12796 327 aaPredicted RBP11.93□□□□□ -0.5
SHKBP1-202ENST00000593764 BTF3L4Q96K17 158 aa11.93□□□□□ -0.5
SHKBP1-202ENST00000593764 C20orf78Q9BR46 151 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms