RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 SUMO2P61956 95 aaKnown RBP10.09□□□□□ -0.79
DDX39A-221ENST00000593026 BIRC6Q9NR09 4857 aa10.09□□□□□ -0.79
DDX39A-221ENST00000593026 TRBV27A0A0K0K1C4 114 aa10.08□□□□□ -0.8
DDX39A-221ENST00000593026 IBA57-AS1B1ANH7 110 aa10.08□□□□□ -0.8
DDX39A-221ENST00000593026 APCSP02743 223 aa10.08□□□□□ -0.8
DDX39A-221ENST00000593026 POLR2KP53803 58 aaKnown RBP10.08□□□□□ -0.8
DDX39A-221ENST00000593026 TMEM136Q6ZRR5 245 aa10.08□□□□□ -0.8
DDX39A-221ENST00000593026 ORMDL3Q8N138 153 aa10.08□□□□□ -0.8
DDX39A-221ENST00000593026 TRBV24-1A0A075B6N3 115 aa10.07□□□□□ -0.8
DDX39A-221ENST00000593026 VCYO14598 125 aa10.07□□□□□ -0.8
DDX39A-221ENST00000593026 TNFRSF6BO95407 300 aa10.07□□□□□ -0.8
DDX39A-221ENST00000593026 GAGE6Q13070 117 aa10.07□□□□□ -0.8
DDX39A-221ENST00000593026 LAGE3Q14657 143 aa10.07□□□□□ -0.8
DDX39A-221ENST00000593026 MPV17L2Q567V2 206 aa10.07□□□□□ -0.8
DDX39A-221ENST00000593026 NFE4Q86UQ8 179 aa10.07□□□□□ -0.8
DDX39A-221ENST00000593026 PRELID3AQ96N28 172 aa10.07□□□□□ -0.8
DDX39A-221ENST00000593026 C20orf78Q9BR46 151 aa10.07□□□□□ -0.8
DDX39A-221ENST00000593026 PRSS29PA6NIE9 313 aa10.06□□□□□ -0.8
DDX39A-221ENST00000593026 PHOX2AO14813 284 aa10.06□□□□□ -0.8
DDX39A-221ENST00000593026 UBE2L6O14933 153 aa10.06□□□□□ -0.8
DDX39A-221ENST00000593026 TSHBP01222 138 aa10.06□□□□□ -0.8
DDX39A-221ENST00000593026 NPYP01303 97 aa10.06□□□□□ -0.8
DDX39A-221ENST00000593026 ELOBQ15370 118 aa10.06□□□□□ -0.8
DDX39A-221ENST00000593026 ATRAIDQ6UW56 229 aa10.06□□□□□ -0.8
DDX39A-221ENST00000593026 Q9HAA7 133 aa10.06□□□□□ -0.8
DDX39A-221ENST00000593026 KLK12Q9UKR0 248 aa10.06□□□□□ -0.8
DDX39A-221ENST00000593026 HLA-DQA1P01909 254 aa10.05□□□□□ -0.8
DDX39A-221ENST00000593026 COX19Q49B96 90 aa10.05□□□□□ -0.8
DDX39A-221ENST00000593026 Q8N976 141 aa10.05□□□□□ -0.8
DDX39A-221ENST00000593026 KIR2DL4Q99706 377 aa10.05□□□□□ -0.8
DDX39A-221ENST00000593026 ANGP03950 147 aaKnown RBP10.04□□□□□ -0.8
DDX39A-221ENST00000593026 FCER1GP30273 86 aa10.04□□□□□ -0.8
DDX39A-221ENST00000593026 RBX1P62877 108 aa10.04□□□□□ -0.8
DDX39A-221ENST00000593026 RPL32P62910 135 aaKnown RBP10.04□□□□□ -0.8
DDX39A-221ENST00000593026 SMIM2Q9BVW6 85 aa10.04□□□□□ -0.8
DDX39A-221ENST00000593026 GNB1LQ9BYB4 327 aa10.04□□□□□ -0.8
DDX39A-221ENST00000593026 LAMTOR2Q9Y2Q5 125 aa10.04□□□□□ -0.8
DDX39A-221ENST00000593026 TRAV8-3A0A0A6YYJ7 113 aa10.03□□□□□ -0.8
DDX39A-221ENST00000593026 TGIF2-C20orf24A0A0A6YYL0 155 aa10.03□□□□□ -0.8
DDX39A-221ENST00000593026 Q6ZRN7 208 aaPredicted RBP10.03□□□□□ -0.8
DDX39A-221ENST00000593026 DNAH2Q9P225 4427 aa10.03□□□□□ -0.8
DDX39A-221ENST00000593026 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.02□□□□□ -0.81
DDX39A-221ENST00000593026 IGKV2-29A2NJV5 120 aaPredicted RBP10.02□□□□□ -0.81
DDX39A-221ENST00000593026 H7C423 109 aa10.02□□□□□ -0.81
DDX39A-221ENST00000593026 MT-ND6P03923 174 aa10.02□□□□□ -0.81
DDX39A-221ENST00000593026 ESDP10768 282 aa10.02□□□□□ -0.81
DDX39A-221ENST00000593026 TNP2Q05952 138 aa10.02□□□□□ -0.81
DDX39A-221ENST00000593026 AMMECR1LQ6DCA0 310 aa10.02□□□□□ -0.81
DDX39A-221ENST00000593026 UBE2WQ96B02 151 aa10.02□□□□□ -0.81
DDX39A-221ENST00000593026 DNAH10Q8IVF4 4471 aa10.01□□□□□ -0.81
DDX39A-221ENST00000593026 FRAS1Q86XX4 4008 aa10.01□□□□□ -0.81
DDX39A-221ENST00000593026 A0A1B0GUV1 79 aa10.01□□□□□ -0.81
DDX39A-221ENST00000593026 TCAPO15273 167 aa10.01□□□□□ -0.81
DDX39A-221ENST00000593026 CRPP02741 224 aa10.01□□□□□ -0.81
DDX39A-221ENST00000593026 KIAA1644Q3SXP7 199 aa10.01□□□□□ -0.81
DDX39A-221ENST00000593026 MAP1LC3AQ9H492 121 aa10.01□□□□□ -0.81
DDX39A-221ENST00000593026 PSCAO43653 123 aa10□□□□□ -0.81
DDX39A-221ENST00000593026 FGF6P10767 208 aa10□□□□□ -0.81
DDX39A-221ENST00000593026 Q0VG73 95 aa10□□□□□ -0.81
DDX39A-221ENST00000593026 RMI2Q96E14 147 aa10□□□□□ -0.81
DDX39A-221ENST00000593026 MRPL18Q9H0U6 180 aaKnown RBP10□□□□□ -0.81
DDX39A-221ENST00000593026 IGLV4-60A0A075B6I1 120 aa9.99□□□□□ -0.81
DDX39A-221ENST00000593026 LOC389332A0A1B0GUA5 103 aa9.99□□□□□ -0.81
DDX39A-221ENST00000593026 PRSS47A8MTI9 375 aa9.99□□□□□ -0.81
DDX39A-221ENST00000593026 RNASEKQ6P5S7 137 aaKnown RBP9.99□□□□□ -0.81
DDX39A-221ENST00000593026 ENHOQ6UWT2 76 aa9.99□□□□□ -0.81
DDX39A-221ENST00000593026 CBLN2Q8IUK8 224 aa9.99□□□□□ -0.81
DDX39A-221ENST00000593026 LINC00269Q8N2A0 174 aa9.99□□□□□ -0.81
DDX39A-221ENST00000593026 C20orf203Q8NBC4 194 aa9.99□□□□□ -0.81
DDX39A-221ENST00000593026 TM2D2Q9BX73 214 aa9.99□□□□□ -0.81
DDX39A-221ENST00000593026 SMCO4Q9NRQ5 59 aa9.99□□□□□ -0.81
DDX39A-221ENST00000593026 ZNF25P17030 456 aaPredicted RBP9.98□□□□□ -0.81
DDX39A-221ENST00000593026 RAB5AP20339 215 aa9.98□□□□□ -0.81
DDX39A-221ENST00000593026 FABP9Q0Z7S8 132 aa9.98□□□□□ -0.81
DDX39A-221ENST00000593026 CLPSL2Q6UWE3 100 aa9.98□□□□□ -0.81
DDX39A-221ENST00000593026 PRR34Q9NV39 138 aa9.98□□□□□ -0.81
DDX39A-221ENST00000593026 IGKV2D-24A0A075B6R9 120 aa9.97□□□□□ -0.81
DDX39A-221ENST00000593026 REG3AQ06141 175 aa9.97□□□□□ -0.81
DDX39A-221ENST00000593026 MIAQ16674 131 aa9.97□□□□□ -0.81
DDX39A-221ENST00000593026 TMEM18Q96B42 140 aa9.97□□□□□ -0.81
DDX39A-221ENST00000593026 TMEM101Q96IK0 257 aa9.97□□□□□ -0.81
DDX39A-221ENST00000593026 YPEL4Q96NS1 127 aa9.97□□□□□ -0.81
DDX39A-221ENST00000593026 TRAPPC1Q9Y5R8 145 aa9.97□□□□□ -0.81
DDX39A-221ENST00000593026 COX11Q9Y6N1 276 aa9.97□□□□□ -0.81
DDX39A-221ENST00000593026 A0A1B0GVY2 172 aa9.96□□□□□ -0.82
DDX39A-221ENST00000593026 SMAGPQ0VAQ4 97 aa9.96□□□□□ -0.82
DDX39A-221ENST00000593026 MRPL52Q86TS9 123 aaKnown RBP9.96□□□□□ -0.82
DDX39A-221ENST00000593026 Q8N8P6 123 aa9.96□□□□□ -0.82
DDX39A-221ENST00000593026 OR5A1Q8NGJ0 315 aa9.96□□□□□ -0.82
DDX39A-221ENST00000593026 ALKBH7Q9BT30 221 aaPredicted RBP9.96□□□□□ -0.82
DDX39A-221ENST00000593026 C1orf43Q9BWL3 253 aa9.96□□□□□ -0.82
DDX39A-221ENST00000593026 NXT2Q9NPJ8 142 aaKnown RBP9.96□□□□□ -0.82
DDX39A-221ENST00000593026 DNAH17Q9UFH2 4485 aa9.96□□□□□ -0.82
DDX39A-221ENST00000593026 EREGO14944 169 aa9.94□□□□□ -0.82
DDX39A-221ENST00000593026 DGAT2L7PQ6IED9 249 aa9.94□□□□□ -0.82
DDX39A-221ENST00000593026 UBE2D4Q9Y2X8 147 aa9.94□□□□□ -0.82
DDX39A-221ENST00000593026 A0A087WTM6 91 aa9.93□□□□□ -0.82
DDX39A-221ENST00000593026 IGKV3OR2-268A0A0C4DH90 116 aa9.93□□□□□ -0.82
DDX39A-221ENST00000593026 IFI27P40305 119 aaPredicted RBP9.93□□□□□ -0.82
DDX39A-221ENST00000593026 FAT2Q9NYQ8 4349 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms