RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 COTL1Q14019 142 aa8.8□□□□□ -1
CDK5RAP3-234ENST00000584525 CHCHD7Q9BUK0 85 aa8.8□□□□□ -1
CDK5RAP3-234ENST00000584525 TM2D2Q9BX73 214 aa8.8□□□□□ -1
CDK5RAP3-234ENST00000584525 TMEM191AQ9H0A3 160 aa8.8□□□□□ -1
CDK5RAP3-234ENST00000584525 FLG2Q5D862 2391 aaPredicted RBP8.8□□□□□ -1
CDK5RAP3-234ENST00000584525 TRAV8-3A0A0A6YYJ7 113 aa8.79□□□□□ -1
CDK5RAP3-234ENST00000584525 A0A1B0GW15 77 aa8.79□□□□□ -1
CDK5RAP3-234ENST00000584525 IBA57-AS1B1ANH7 110 aa8.79□□□□□ -1
CDK5RAP3-234ENST00000584525 CAMPP49913 170 aa8.79□□□□□ -1
CDK5RAP3-234ENST00000584525 IFITM2Q01629 132 aa8.79□□□□□ -1
CDK5RAP3-234ENST00000584525 LAGE3Q14657 143 aa8.79□□□□□ -1
CDK5RAP3-234ENST00000584525 COMMD7Q86VX2 200 aa8.79□□□□□ -1
CDK5RAP3-234ENST00000584525 NIT1Q86X76 327 aa8.79□□□□□ -1
CDK5RAP3-234ENST00000584525 ANAPC16Q96DE5 110 aa8.79□□□□□ -1
CDK5RAP3-234ENST00000584525 AMTP48728 403 aa8.78□□□□□ -1
CDK5RAP3-234ENST00000584525 MRPL54Q6P161 138 aaKnown RBP8.78□□□□□ -1
CDK5RAP3-234ENST00000584525 GATD1Q8NB37 220 aa8.78□□□□□ -1
CDK5RAP3-234ENST00000584525 SMIM27A0A1W2PRY6 76 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 ANGP03950 147 aaKnown RBP8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 PMCHP20382 165 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 GAGE6Q13070 117 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 AMN1Q8IY45 258 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 UBE2WQ96B02 151 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 MRAP2Q96G30 205 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 TMEM243Q9BU79 118 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 TMEM70Q9BUB7 260 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 ST20Q9HBF5 79 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 KLK12Q9UKR0 248 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 COX11Q9Y6N1 276 aa8.77□□□□□ -1.01
CDK5RAP3-234ENST00000584525 PPP1R17O96001 155 aa8.76□□□□□ -1.01
CDK5RAP3-234ENST00000584525 APCSP02743 223 aa8.76□□□□□ -1.01
CDK5RAP3-234ENST00000584525 HBBP68871 147 aa8.76□□□□□ -1.01
CDK5RAP3-234ENST00000584525 Q0VG73 95 aa8.76□□□□□ -1.01
CDK5RAP3-234ENST00000584525 RPL39LQ96EH5 51 aaKnown RBP8.76□□□□□ -1.01
CDK5RAP3-234ENST00000584525 IGKV2D-24A0A075B6R9 120 aa8.75□□□□□ -1.01
CDK5RAP3-234ENST00000584525 TMEM218A2RU14 115 aa8.75□□□□□ -1.01
CDK5RAP3-234ENST00000584525 SDHAF1A6NFY7 115 aa8.75□□□□□ -1.01
CDK5RAP3-234ENST00000584525 IQCJQ1A5X6 159 aa8.75□□□□□ -1.01
CDK5RAP3-234ENST00000584525 AMMECR1LQ6DCA0 310 aa8.75□□□□□ -1.01
CDK5RAP3-234ENST00000584525 Q8N3U1 123 aa8.75□□□□□ -1.01
CDK5RAP3-234ENST00000584525 NTN5Q8WTR8 489 aaPredicted RBP8.75□□□□□ -1.01
CDK5RAP3-234ENST00000584525 LRCOL1A6NCL2 159 aa8.74□□□□□ -1.01
CDK5RAP3-234ENST00000584525 I3L3M4 83 aa8.74□□□□□ -1.01
CDK5RAP3-234ENST00000584525 NCR2O95944 276 aa8.74□□□□□ -1.01
CDK5RAP3-234ENST00000584525 RAB4AP20338 218 aa8.74□□□□□ -1.01
CDK5RAP3-234ENST00000584525 CKS2P33552 79 aa8.74□□□□□ -1.01
CDK5RAP3-234ENST00000584525 MPV17L2Q567V2 206 aa8.74□□□□□ -1.01
CDK5RAP3-234ENST00000584525 ATP5L2Q7Z4Y8 100 aa8.74□□□□□ -1.01
CDK5RAP3-234ENST00000584525 DEFB104AQ8WTQ1 72 aa8.74□□□□□ -1.01
CDK5RAP3-234ENST00000584525 C1orf43Q9BWL3 253 aa8.74□□□□□ -1.01
CDK5RAP3-234ENST00000584525 FCER1GP30273 86 aa8.73□□□□□ -1.01
CDK5RAP3-234ENST00000584525 ATRAIDQ6UW56 229 aa8.73□□□□□ -1.01
CDK5RAP3-234ENST00000584525 NTM-AS1Q6ZSK4 140 aa8.73□□□□□ -1.01
CDK5RAP3-234ENST00000584525 Q8N814 137 aa8.73□□□□□ -1.01
CDK5RAP3-234ENST00000584525 SEC11CQ9BY50 192 aa8.73□□□□□ -1.01
CDK5RAP3-234ENST00000584525 FAM30AQ9NZY2 134 aa8.73□□□□□ -1.01
CDK5RAP3-234ENST00000584525 DNAH8Q96JB1 4490 aa8.73□□□□□ -1.01
CDK5RAP3-234ENST00000584525 SMKR1H3BMG3 65 aa8.72□□□□□ -1.01
CDK5RAP3-234ENST00000584525 S100PP25815 95 aa8.72□□□□□ -1.01
CDK5RAP3-234ENST00000584525 NDUFA5Q16718 116 aa8.72□□□□□ -1.01
CDK5RAP3-234ENST00000584525 FAM104BQ5XKR9 115 aa8.72□□□□□ -1.01
CDK5RAP3-234ENST00000584525 Q8N976 141 aa8.72□□□□□ -1.01
CDK5RAP3-234ENST00000584525 BTF3L4Q96K17 158 aa8.72□□□□□ -1.01
CDK5RAP3-234ENST00000584525 TRBV6-5A0A0K0K1A5 114 aa8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 LINC00862A6NCI5 91 aa8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 PLA2G1BP04054 148 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 RBX1P62877 108 aa8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 SMAGPQ0VAQ4 97 aa8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 MRPL51Q4U2R6 128 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 RNASEKQ6P5S7 137 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 CLPSL2Q6UWE3 100 aa8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 RNF185Q96GF1 192 aa8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 TMEM101Q96IK0 257 aa8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 KIR2DL4Q99706 377 aa8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 CTDSP1Q9GZU7 261 aa8.71□□□□□ -1.02
CDK5RAP3-234ENST00000584525 VCYO14598 125 aa8.7□□□□□ -1.02
CDK5RAP3-234ENST00000584525 MIAQ16674 131 aa8.7□□□□□ -1.02
CDK5RAP3-234ENST00000584525 TMEM242Q9NWH2 141 aa8.7□□□□□ -1.02
CDK5RAP3-234ENST00000584525 PPBPP02775 128 aa8.69□□□□□ -1.02
CDK5RAP3-234ENST00000584525 ADCYAP1P18509 176 aa8.69□□□□□ -1.02
CDK5RAP3-234ENST00000584525 SUMO2P61956 95 aaKnown RBP8.69□□□□□ -1.02
CDK5RAP3-234ENST00000584525 LINC00269Q8N2A0 174 aa8.69□□□□□ -1.02
CDK5RAP3-234ENST00000584525 HMCN2Q8NDA2 5059 aa8.69□□□□□ -1.02
CDK5RAP3-234ENST00000584525 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 IGKV2-29A2NJV5 120 aaPredicted RBP8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 KRTAP29-1A8MX34 341 aaPredicted RBP8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 D6R8Y8 96 aa8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 H7C423 109 aa8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 TCAPO15273 167 aa8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 HLA-DQA1P01909 254 aa8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 DGAT2L7PQ6IED9 249 aa8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 ORMDL3Q8N138 153 aa8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 LINC00528Q8N1L1 170 aa8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 TMEM18Q96B42 140 aa8.68□□□□□ -1.02
CDK5RAP3-234ENST00000584525 UBR4Q5T4S7 5183 aa8.67□□□□□ -1.02
CDK5RAP3-234ENST00000584525 IGKV3OR2-268A0A0C4DH90 116 aa8.67□□□□□ -1.02
CDK5RAP3-234ENST00000584525 A0A1B0GXF2 115 aa8.67□□□□□ -1.02
CDK5RAP3-234ENST00000584525 C7orf77A4D0Y5 90 aa8.67□□□□□ -1.02
CDK5RAP3-234ENST00000584525 RPS10P46783 165 aaKnown RBP8.67□□□□□ -1.02
CDK5RAP3-234ENST00000584525 REG3AQ06141 175 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms