RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 SIVA1O15304 175 aa10.73□□□□□ -0.69
SPG7-218ENST00000568205 AMTP48728 403 aa10.73□□□□□ -0.69
SPG7-218ENST00000568205 Q9H8V8 135 aa10.73□□□□□ -0.69
SPG7-218ENST00000568205 LOC389332A0A1B0GUA5 103 aa10.72□□□□□ -0.69
SPG7-218ENST00000568205 KIR2DL4Q99706 377 aa10.72□□□□□ -0.69
SPG7-218ENST00000568205 CHCHD5Q9BSY4 110 aa10.72□□□□□ -0.69
SPG7-218ENST00000568205 TMEM243Q9BU79 118 aa10.72□□□□□ -0.69
SPG7-218ENST00000568205 DNAH10OSP0CZ25 163 aa10.71□□□□□ -0.69
SPG7-218ENST00000568205 FCER1GP30273 86 aa10.71□□□□□ -0.69
SPG7-218ENST00000568205 NIT1Q86X76 327 aa10.71□□□□□ -0.69
SPG7-218ENST00000568205 SACSQ9NZJ4 4579 aa10.7□□□□□ -0.7
SPG7-218ENST00000568205 IGLV2-18A0A075B6J9 118 aa10.7□□□□□ -0.7
SPG7-218ENST00000568205 TCAPO15273 167 aa10.7□□□□□ -0.7
SPG7-218ENST00000568205 TRGC2P03986 189 aa10.7□□□□□ -0.7
SPG7-218ENST00000568205 LINC01556Q5JQF7 62 aa10.7□□□□□ -0.7
SPG7-218ENST00000568205 Q8N8P6 123 aa10.7□□□□□ -0.7
SPG7-218ENST00000568205 ESDP10768 282 aa10.69□□□□□ -0.7
SPG7-218ENST00000568205 PKIAP61925 76 aa10.69□□□□□ -0.7
SPG7-218ENST00000568205 GAGE6Q13070 117 aa10.69□□□□□ -0.7
SPG7-218ENST00000568205 CHCHD7Q9BUK0 85 aa10.69□□□□□ -0.7
SPG7-218ENST00000568205 NXT2Q9NPJ8 142 aaKnown RBP10.69□□□□□ -0.7
SPG7-218ENST00000568205 NBDYA0A0U1RRE5 68 aa10.68□□□□□ -0.7
SPG7-218ENST00000568205 Q8N3U1 123 aa10.68□□□□□ -0.7
SPG7-218ENST00000568205 DNAH6Q9C0G6 4158 aa10.68□□□□□ -0.7
SPG7-218ENST00000568205 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.67□□□□□ -0.7
SPG7-218ENST00000568205 A0A087WX48 190 aa10.67□□□□□ -0.7
SPG7-218ENST00000568205 IGKV2-29A2NJV5 120 aaPredicted RBP10.67□□□□□ -0.7
SPG7-218ENST00000568205 TMEM262E9PQX1 116 aa10.67□□□□□ -0.7
SPG7-218ENST00000568205 UBE2L6O14933 153 aa10.67□□□□□ -0.7
SPG7-218ENST00000568205 IGHV3-30P01768 117 aa10.67□□□□□ -0.7
SPG7-218ENST00000568205 IGHV3-33P01772 117 aa10.67□□□□□ -0.7
SPG7-218ENST00000568205 IGHV3-30-3P0DP02 117 aa10.67□□□□□ -0.7
SPG7-218ENST00000568205 IGHV3-30-5P0DP03 117 aa10.67□□□□□ -0.7
SPG7-218ENST00000568205 IFI27P40305 119 aaPredicted RBP10.67□□□□□ -0.7
SPG7-218ENST00000568205 TTC32Q5I0X7 151 aa10.67□□□□□ -0.7
SPG7-218ENST00000568205 C18orf32Q8TCD1 76 aa10.67□□□□□ -0.7
SPG7-218ENST00000568205 KMT2CQ8NEZ4 4911 aaKnown RBP10.67□□□□□ -0.7
SPG7-218ENST00000568205 PRSS3P2Q8NHM4 247 aa10.66□□□□□ -0.7
SPG7-218ENST00000568205 TRAV9-2A0A087WT02 112 aa10.65□□□□□ -0.7
SPG7-218ENST00000568205 H7C423 109 aa10.65□□□□□ -0.7
SPG7-218ENST00000568205 K7EMI3 77 aa10.65□□□□□ -0.7
SPG7-218ENST00000568205 K7EP13 123 aa10.65□□□□□ -0.7
SPG7-218ENST00000568205 M0R2N4 97 aa10.65□□□□□ -0.7
SPG7-218ENST00000568205 RBX1P62877 108 aa10.65□□□□□ -0.7
SPG7-218ENST00000568205 MPV17L2Q567V2 206 aa10.65□□□□□ -0.7
SPG7-218ENST00000568205 Q6ZR54 194 aa10.65□□□□□ -0.7
SPG7-218ENST00000568205 KRTAP1-5Q9BYS1 174 aa10.65□□□□□ -0.7
SPG7-218ENST00000568205 FGF6P10767 208 aa10.64□□□□□ -0.71
SPG7-218ENST00000568205 LAGE3Q14657 143 aa10.64□□□□□ -0.71
SPG7-218ENST00000568205 FA2HQ7L5A8 372 aa10.64□□□□□ -0.71
SPG7-218ENST00000568205 C10orf126Q8N4M7 172 aa10.64□□□□□ -0.71
SPG7-218ENST00000568205 Q8N976 141 aa10.64□□□□□ -0.71
SPG7-218ENST00000568205 C20orf203Q8NBC4 194 aa10.64□□□□□ -0.71
SPG7-218ENST00000568205 ORMDL2Q53FV1 153 aa10.63□□□□□ -0.71
SPG7-218ENST00000568205 AMMECR1LQ6DCA0 310 aa10.63□□□□□ -0.71
SPG7-218ENST00000568205 A0A1B0GUV1 79 aa10.62□□□□□ -0.71
SPG7-218ENST00000568205 LINC01546A6NGU7 62 aa10.62□□□□□ -0.71
SPG7-218ENST00000568205 RNASEKQ6P5S7 137 aaKnown RBP10.62□□□□□ -0.71
SPG7-218ENST00000568205 TMEM18Q96B42 140 aa10.62□□□□□ -0.71
SPG7-218ENST00000568205 RYR2Q92736 4967 aa10.62□□□□□ -0.71
SPG7-218ENST00000568205 ZNF25P17030 456 aaPredicted RBP10.61□□□□□ -0.71
SPG7-218ENST00000568205 RPL39P62891 51 aaKnown RBP10.61□□□□□ -0.71
SPG7-218ENST00000568205 MRPL52Q86TS9 123 aaKnown RBP10.61□□□□□ -0.71
SPG7-218ENST00000568205 URB1-AS1Q96HZ7 61 aa10.61□□□□□ -0.71
SPG7-218ENST00000568205 KLK12Q9UKR0 248 aa10.61□□□□□ -0.71
SPG7-218ENST00000568205 KMT2AQ03164 3969 aa10.61□□□□□ -0.71
SPG7-218ENST00000568205 IGLV4-60A0A075B6I1 120 aa10.6□□□□□ -0.71
SPG7-218ENST00000568205 IBA57-AS1B1ANH7 110 aa10.6□□□□□ -0.71
SPG7-218ENST00000568205 ANGP03950 147 aaKnown RBP10.6□□□□□ -0.71
SPG7-218ENST00000568205 RAB5BP61020 215 aa10.6□□□□□ -0.71
SPG7-218ENST00000568205 SMAGPQ0VAQ4 97 aa10.6□□□□□ -0.71
SPG7-218ENST00000568205 AP5S1Q9NUS5 200 aa10.6□□□□□ -0.71
SPG7-218ENST00000568205 LINC00614P0C842 121 aa10.59□□□□□ -0.71
SPG7-218ENST00000568205 Q0VG73 95 aa10.59□□□□□ -0.71
SPG7-218ENST00000568205 C2orf66Q6UXQ4 117 aa10.59□□□□□ -0.71
SPG7-218ENST00000568205 BAGE3Q86Y29 109 aa10.59□□□□□ -0.71
SPG7-218ENST00000568205 OR5A1Q8NGJ0 315 aa10.59□□□□□ -0.71
SPG7-218ENST00000568205 TMEM101Q96IK0 257 aa10.59□□□□□ -0.71
SPG7-218ENST00000568205 TIMM21Q9BVV7 248 aa10.59□□□□□ -0.71
SPG7-218ENST00000568205 CYSLTR1Q9Y271 337 aa10.59□□□□□ -0.71
SPG7-218ENST00000568205 UBE2D4Q9Y2X8 147 aa10.59□□□□□ -0.71
SPG7-218ENST00000568205 BTF3P20290 206 aaKnown RBP10.58□□□□□ -0.72
SPG7-218ENST00000568205 G0S2P27469 103 aa10.58□□□□□ -0.72
SPG7-218ENST00000568205 DGAT2L7PQ6IED9 249 aa10.58□□□□□ -0.72
SPG7-218ENST00000568205 SPANXA1Q9NS26 97 aa10.58□□□□□ -0.72
SPG7-218ENST00000568205 HIST1H2BKO60814 126 aa10.57□□□□□ -0.72
SPG7-218ENST00000568205 HIST1H2BJP06899 126 aa10.57□□□□□ -0.72
SPG7-218ENST00000568205 HIST1H2BOP23527 126 aa10.57□□□□□ -0.72
SPG7-218ENST00000568205 HIST1H2BBP33778 126 aa10.57□□□□□ -0.72
SPG7-218ENST00000568205 HIST1H2BDP58876 126 aa10.57□□□□□ -0.72
SPG7-218ENST00000568205 HIST1H2BCP62807 126 aa10.57□□□□□ -0.72
SPG7-218ENST00000568205 HIST2H2BEQ16778 126 aa10.57□□□□□ -0.72
SPG7-218ENST00000568205 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.57□□□□□ -0.72
SPG7-218ENST00000568205 LINC00269Q8N2A0 174 aa10.57□□□□□ -0.72
SPG7-218ENST00000568205 HIST1H2BHQ93079 126 aa10.57□□□□□ -0.72
SPG7-218ENST00000568205 UBE2WQ96B02 151 aa10.57□□□□□ -0.72
SPG7-218ENST00000568205 HIST1H2BNQ99877 126 aa10.57□□□□□ -0.72
SPG7-218ENST00000568205 HIST1H2BMQ99879 126 aa10.57□□□□□ -0.72
SPG7-218ENST00000568205 CSDC2Q9Y534 153 aaKnown RBP10.57□□□□□ -0.72
SPG7-218ENST00000568205 TRAV8-3A0A0A6YYJ7 113 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms