RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 TWIST1Q15672 202 aa6.8□□□□□ -1.32
LINC00564-201ENST00000567258 SUMO4Q6EEV6 95 aa6.8□□□□□ -1.32
LINC00564-201ENST00000567258 RASL11AQ6T310 242 aa6.8□□□□□ -1.32
LINC00564-201ENST00000567258 KIF25-AS1Q9Y6Z4 181 aa6.8□□□□□ -1.32
LINC00564-201ENST00000567258 M0QY20 66 aa6.79□□□□□ -1.32
LINC00564-201ENST00000567258 RBX1P62877 108 aa6.79□□□□□ -1.32
LINC00564-201ENST00000567258 BLOC1S1P78537 153 aa6.79□□□□□ -1.32
LINC00564-201ENST00000567258 IQCJQ1A5X6 159 aa6.79□□□□□ -1.32
LINC00564-201ENST00000567258 LINC01620Q4KN68 170 aa6.79□□□□□ -1.32
LINC00564-201ENST00000567258 WDR73Q6P4I2 378 aa6.79□□□□□ -1.32
LINC00564-201ENST00000567258 CLPSL2Q6UWE3 100 aa6.79□□□□□ -1.32
LINC00564-201ENST00000567258 Q6ZSA8 131 aa6.79□□□□□ -1.32
LINC00564-201ENST00000567258 NTM-AS1Q6ZSK4 140 aa6.79□□□□□ -1.32
LINC00564-201ENST00000567258 AKAP14Q86UN6 197 aa6.79□□□□□ -1.32
LINC00564-201ENST00000567258 LINC00269Q8N2A0 174 aa6.79□□□□□ -1.32
LINC00564-201ENST00000567258 TMEM243Q9BU79 118 aa6.79□□□□□ -1.32
LINC00564-201ENST00000567258 NIT2Q9NQR4 276 aa6.79□□□□□ -1.32
LINC00564-201ENST00000567258 DMBT1Q9UGM3 2413 aaPredicted RBP6.78□□□□□ -1.32
LINC00564-201ENST00000567258 USP17L23D6RBM5 183 aa6.78□□□□□ -1.32
LINC00564-201ENST00000567258 REG3AQ06141 175 aa6.78□□□□□ -1.32
LINC00564-201ENST00000567258 COTL1Q14019 142 aa6.78□□□□□ -1.32
LINC00564-201ENST00000567258 C9orf62Q8N4C0 152 aa6.78□□□□□ -1.32
LINC00564-201ENST00000567258 NUDT10Q8NFP7 164 aa6.78□□□□□ -1.32
LINC00564-201ENST00000567258 NUDT11Q96G61 164 aa6.78□□□□□ -1.32
LINC00564-201ENST00000567258 CHAC1Q9BUX1 264 aa6.78□□□□□ -1.32
LINC00564-201ENST00000567258 RPP21Q9H633 154 aaKnown RBP6.78□□□□□ -1.32
LINC00564-201ENST00000567258 FLG2Q5D862 2391 aaPredicted RBP6.77□□□□□ -1.32
LINC00564-201ENST00000567258 TRBV20OR9-2A0A075B6H5 130 aa6.77□□□□□ -1.33
LINC00564-201ENST00000567258 TRAV8-4A0A0B4J246 113 aa6.77□□□□□ -1.33
LINC00564-201ENST00000567258 DGAT2L7PQ6IED9 249 aa6.77□□□□□ -1.33
LINC00564-201ENST00000567258 SCXQ7RTU7 201 aa6.77□□□□□ -1.33
LINC00564-201ENST00000567258 DEFB104AQ8WTQ1 72 aa6.77□□□□□ -1.33
LINC00564-201ENST00000567258 BORCS7Q96B45 105 aa6.77□□□□□ -1.33
LINC00564-201ENST00000567258 PGLYRP4Q96LB8 373 aa6.77□□□□□ -1.33
LINC00564-201ENST00000567258 PRR34Q9NV39 138 aa6.77□□□□□ -1.33
LINC00564-201ENST00000567258 CTRLP40313 264 aa6.76□□□□□ -1.33
LINC00564-201ENST00000567258 AMTP48728 403 aa6.76□□□□□ -1.33
LINC00564-201ENST00000567258 CEBPGP53567 150 aa6.76□□□□□ -1.33
LINC00564-201ENST00000567258 TEX261Q6UWH6 196 aa6.76□□□□□ -1.33
LINC00564-201ENST00000567258 CLRN3Q8NCR9 226 aa6.76□□□□□ -1.33
LINC00564-201ENST00000567258 OCC1Q8TAD7 63 aa6.76□□□□□ -1.33
LINC00564-201ENST00000567258 RNASE7Q9H1E1 156 aaKnown RBP6.76□□□□□ -1.33
LINC00564-201ENST00000567258 hCG_2014768A0A024R1R8 64 aa6.75□□□□□ -1.33
LINC00564-201ENST00000567258 IGLV10-54A0A075B6I4 117 aa6.75□□□□□ -1.33
LINC00564-201ENST00000567258 A0A1B0GUV1 79 aa6.75□□□□□ -1.33
LINC00564-201ENST00000567258 A8MWL6 223 aa6.75□□□□□ -1.33
LINC00564-201ENST00000567258 TMEM250H0YL14 139 aa6.75□□□□□ -1.33
LINC00564-201ENST00000567258 GATCO43716 136 aaKnown RBP6.75□□□□□ -1.33
LINC00564-201ENST00000567258 AMMECR1LQ6DCA0 310 aa6.75□□□□□ -1.33
LINC00564-201ENST00000567258 ALKAL2Q6UX46 152 aa6.75□□□□□ -1.33
LINC00564-201ENST00000567258 EIF5A2Q9GZV4 153 aaKnown RBP6.75□□□□□ -1.33
LINC00564-201ENST00000567258 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.74□□□□□ -1.33
LINC00564-201ENST00000567258 PRSS1P07477 247 aa6.74□□□□□ -1.33
LINC00564-201ENST00000567258 Q6ZNX1 250 aa6.74□□□□□ -1.33
LINC00564-201ENST00000567258 CIRBP-AS1Q8TBR5 109 aa6.74□□□□□ -1.33
LINC00564-201ENST00000567258 DPH3Q96FX2 82 aa6.74□□□□□ -1.33
LINC00564-201ENST00000567258 hDV102S1A0JD36 115 aa6.73□□□□□ -1.33
LINC00564-201ENST00000567258 K7EN84 100 aa6.73□□□□□ -1.33
LINC00564-201ENST00000567258 ANKRD39Q53RE8 183 aa6.73□□□□□ -1.33
LINC00564-201ENST00000567258 CFAP161Q6P656 301 aa6.73□□□□□ -1.33
LINC00564-201ENST00000567258 CNFNQ9BYD5 112 aa6.73□□□□□ -1.33
LINC00564-201ENST00000567258 IGLV4-60A0A075B6I1 120 aa6.72□□□□□ -1.33
LINC00564-201ENST00000567258 TRAV26-2A0A0B4J265 109 aa6.72□□□□□ -1.33
LINC00564-201ENST00000567258 IGKV3OR2-268A0A0C4DH90 116 aa6.72□□□□□ -1.33
LINC00564-201ENST00000567258 NCR2O95944 276 aa6.72□□□□□ -1.33
LINC00564-201ENST00000567258 APCSP02743 223 aa6.72□□□□□ -1.33
LINC00564-201ENST00000567258 RNASEKQ6P5S7 137 aaKnown RBP6.72□□□□□ -1.33
LINC00564-201ENST00000567258 FAM231DQ6ZW35 169 aa6.72□□□□□ -1.33
LINC00564-201ENST00000567258 C9orf163Q8N9P6 203 aa6.72□□□□□ -1.33
LINC00564-201ENST00000567258 GATD1Q8NB37 220 aa6.72□□□□□ -1.33
LINC00564-201ENST00000567258 C20orf203Q8NBC4 194 aa6.72□□□□□ -1.33
LINC00564-201ENST00000567258 SMIM7Q9BQ49 75 aa6.72□□□□□ -1.33
LINC00564-201ENST00000567258 PMCHP20382 165 aa6.71□□□□□ -1.34
LINC00564-201ENST00000567258 TMEM101Q96IK0 257 aa6.71□□□□□ -1.34
LINC00564-201ENST00000567258 BTF3L4Q96K17 158 aa6.71□□□□□ -1.34
LINC00564-201ENST00000567258 VPS13BQ7Z7G8 4022 aa6.71□□□□□ -1.34
LINC00564-201ENST00000567258 IGHV3-64A0A075B6Q5 118 aa6.7□□□□□ -1.34
LINC00564-201ENST00000567258 ZNF727A8MUV8 499 aa6.7□□□□□ -1.34
LINC00564-201ENST00000567258 H7C423 109 aa6.7□□□□□ -1.34
LINC00564-201ENST00000567258 RPL37AP61513 92 aaKnown RBP6.7□□□□□ -1.34
LINC00564-201ENST00000567258 CT83Q5H943 113 aa6.7□□□□□ -1.34
LINC00564-201ENST00000567258 GTSF1Q8WW33 167 aa6.7□□□□□ -1.34
LINC00564-201ENST00000567258 A0A1B0GUT8 65 aa6.69□□□□□ -1.34
LINC00564-201ENST00000567258 SDHAF1A6NFY7 115 aa6.69□□□□□ -1.34
LINC00564-201ENST00000567258 I3L3M4 83 aa6.69□□□□□ -1.34
LINC00564-201ENST00000567258 CNBPP62633 177 aaKnown RBP6.69□□□□□ -1.34
LINC00564-201ENST00000567258 KRTAP26-1Q6PEX3 210 aa6.69□□□□□ -1.34
LINC00564-201ENST00000567258 LYPD6BQ8NI32 183 aa6.69□□□□□ -1.34
LINC00564-201ENST00000567258 RPL39LQ96EH5 51 aaKnown RBP6.69□□□□□ -1.34
LINC00564-201ENST00000567258 FAM210AQ96ND0 272 aa6.69□□□□□ -1.34
LINC00564-201ENST00000567258 ST20Q9HBF5 79 aa6.69□□□□□ -1.34
LINC00564-201ENST00000567258 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.68□□□□□ -1.34
LINC00564-201ENST00000567258 IGKV2-29A2NJV5 120 aaPredicted RBP6.68□□□□□ -1.34
LINC00564-201ENST00000567258 GAGE12HA6NDE8 117 aa6.68□□□□□ -1.34
LINC00564-201ENST00000567258 HIGD1CA8MV81 97 aa6.68□□□□□ -1.34
LINC00564-201ENST00000567258 KRTAP29-1A8MX34 341 aaPredicted RBP6.68□□□□□ -1.34
LINC00564-201ENST00000567258 NDUFS6O75380 124 aaKnown RBP6.68□□□□□ -1.34
LINC00564-201ENST00000567258 ZNF25P17030 456 aaPredicted RBP6.68□□□□□ -1.34
LINC00564-201ENST00000567258 TSKUQ8WUA8 353 aa6.68□□□□□ -1.34
LINC00564-201ENST00000567258 GFRA4Q9GZZ7 299 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms