RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 CCKP06307 115 aa3.9□□□□□ -1.78
SMG1-211ENST00000565324 CTSGP08311 255 aa3.9□□□□□ -1.78
SMG1-211ENST00000565324 TRIAP1O43715 76 aa3.9□□□□□ -1.78
SMG1-211ENST00000565324 LY6HO94772 140 aa3.9□□□□□ -1.78
SMG1-211ENST00000565324 NRACQ8N912 160 aa3.9□□□□□ -1.78
SMG1-211ENST00000565324 GPHB5Q86YW7 130 aa3.9□□□□□ -1.78
SMG1-211ENST00000565324 PTPN13Q12923 2485 aa3.9□□□□□ -1.78
SMG1-211ENST00000565324 MIFP14174 115 aa3.9□□□□□ -1.78
SMG1-211ENST00000565324 NFE4Q86UQ8 179 aa3.9□□□□□ -1.78
SMG1-211ENST00000565324 AJUBAQ96IF1 538 aa3.9□□□□□ -1.78
SMG1-211ENST00000565324 WT1P19544 449 aaPredicted RBP3.9□□□□□ -1.79
SMG1-211ENST00000565324 LOXL1Q08397 574 aaPredicted RBP3.9□□□□□ -1.79
SMG1-211ENST00000565324 LINC00308Q8TCZ7 52 aa3.9□□□□□ -1.79
SMG1-211ENST00000565324 ZFAND2AQ8N6M9 145 aa3.9□□□□□ -1.79
SMG1-211ENST00000565324 RNF185Q96GF1 192 aa3.9□□□□□ -1.79
SMG1-211ENST00000565324 LST1O00453 97 aa3.9□□□□□ -1.79
SMG1-211ENST00000565324 KLK12Q9UKR0 248 aa3.9□□□□□ -1.79
SMG1-211ENST00000565324 FAM208BQ5VWN6 2430 aa3.9□□□□□ -1.79
SMG1-211ENST00000565324 C19orf71A6NCJ1 209 aa3.9□□□□□ -1.79
SMG1-211ENST00000565324 C5orf56Q8N8D9 126 aa3.9□□□□□ -1.79
SMG1-211ENST00000565324 TRAV7A0A075B6U4 112 aa3.9□□□□□ -1.79
SMG1-211ENST00000565324 A0A1B0GXF2 115 aa3.89□□□□□ -1.79
SMG1-211ENST00000565324 SNURFQ9Y675 71 aa3.89□□□□□ -1.79
SMG1-211ENST00000565324 RNF138Q8WVD3 245 aa3.89□□□□□ -1.79
SMG1-211ENST00000565324 C4orf3Q8WVX3 66 aa3.89□□□□□ -1.79
SMG1-211ENST00000565324 C9orf85Q96MD7 179 aa3.89□□□□□ -1.79
SMG1-211ENST00000565324 Q6JHZ5 121 aa3.89□□□□□ -1.79
SMG1-211ENST00000565324 COL4A5P29400 1685 aa3.89□□□□□ -1.79
SMG1-211ENST00000565324 RBX1P62877 108 aa3.89□□□□□ -1.79
SMG1-211ENST00000565324 SONP18583 2426 aaKnown RBP3.89□□□□□ -1.79
SMG1-211ENST00000565324 IGHV7-81A0A0B4J1V7 117 aa3.89□□□□□ -1.79
SMG1-211ENST00000565324 F8W735 103 aaPredicted RBP3.89□□□□□ -1.79
SMG1-211ENST00000565324 UBE2D4Q9Y2X8 147 aa3.89□□□□□ -1.79
SMG1-211ENST00000565324 TMEM223A0PJW6 202 aa3.89□□□□□ -1.79
SMG1-211ENST00000565324 THSD7BQ9C0I4 1608 aa3.88□□□□□ -1.79
SMG1-211ENST00000565324 PRYO14603 147 aa3.88□□□□□ -1.79
SMG1-211ENST00000565324 IGHV4-59P01825 116 aa3.88□□□□□ -1.79
SMG1-211ENST00000565324 TTTY13Q9BZ97 58 aa3.88□□□□□ -1.79
SMG1-211ENST00000565324 TRBV27A0A0K0K1C4 114 aa3.88□□□□□ -1.79
SMG1-211ENST00000565324 SMIM9A6NGZ8 99 aa3.88□□□□□ -1.79
SMG1-211ENST00000565324 IGHV3-30P01768 117 aa3.88□□□□□ -1.79
SMG1-211ENST00000565324 IGHV3-30-5P0DP03 117 aa3.88□□□□□ -1.79
SMG1-211ENST00000565324 WFDC10AQ9H1F0 79 aa3.88□□□□□ -1.79
SMG1-211ENST00000565324 REG3AQ06141 175 aa3.88□□□□□ -1.79
SMG1-211ENST00000565324 APRG1Q8IVJ8 170 aa3.88□□□□□ -1.79
SMG1-211ENST00000565324 C7orf33Q8WU49 177 aa3.88□□□□□ -1.79
SMG1-211ENST00000565324 A0A0J9YX75 114 aa3.88□□□□□ -1.79
SMG1-211ENST00000565324 DIAPH2-AS1Q14236 149 aa3.88□□□□□ -1.79
SMG1-211ENST00000565324 Q6ZSR3 168 aa3.88□□□□□ -1.79
SMG1-211ENST00000565324 RSPO1Q2MKA7 263 aaPredicted RBP3.87□□□□□ -1.79
SMG1-211ENST00000565324 MSRB1Q9NZV6 116 aa3.87□□□□□ -1.79
SMG1-211ENST00000565324 PYGO1Q9Y3Y4 419 aa3.87□□□□□ -1.79
SMG1-211ENST00000565324 LINC00694P0DN24 101 aa3.87□□□□□ -1.79
SMG1-211ENST00000565324 DEFB112Q30KQ8 113 aa3.87□□□□□ -1.79
SMG1-211ENST00000565324 TMEM105Q8N8V8 129 aa3.87□□□□□ -1.79
SMG1-211ENST00000565324 LINC00526Q96FQ7 95 aa3.87□□□□□ -1.79
SMG1-211ENST00000565324 HIGD2AQ9BW72 106 aa3.87□□□□□ -1.79
SMG1-211ENST00000565324 Q8N9W7 124 aa3.87□□□□□ -1.79
SMG1-211ENST00000565324 SLURP1P55000 103 aa3.87□□□□□ -1.79
SMG1-211ENST00000565324 LINC00269Q8N2A0 174 aa3.87□□□□□ -1.79
SMG1-211ENST00000565324 CHCHD10Q8WYQ3 142 aaPredicted RBP3.87□□□□□ -1.79
SMG1-211ENST00000565324 U3KQK5 164 aa3.87□□□□□ -1.79
SMG1-211ENST00000565324 ANKHD1Q8IWZ3 2542 aaKnown RBP3.87□□□□□ -1.79
SMG1-211ENST00000565324 LINC00474Q9P2X8 69 aa3.87□□□□□ -1.79
SMG1-211ENST00000565324 SP5Q6BEB4 398 aaPredicted RBP3.87□□□□□ -1.79
SMG1-211ENST00000565324 TRBV6-5A0A0K0K1A5 114 aa3.87□□□□□ -1.79
SMG1-211ENST00000565324 IGLV4-3A0A075B6K6 122 aa3.86□□□□□ -1.79
SMG1-211ENST00000565324 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.86□□□□□ -1.79
SMG1-211ENST00000565324 HIVEP2P31629 2446 aa3.86□□□□□ -1.79
SMG1-211ENST00000565324 MRPS12O15235 138 aaKnown RBP3.86□□□□□ -1.79
SMG1-211ENST00000565324 PATE2Q6UY27 113 aa3.86□□□□□ -1.79
SMG1-211ENST00000565324 CFAP126Q5VTH2 177 aa3.86□□□□□ -1.79
SMG1-211ENST00000565324 M0QXV9 152 aa3.86□□□□□ -1.79
SMG1-211ENST00000565324 CDKN2A-AS1Q9UH64 79 aa3.86□□□□□ -1.79
SMG1-211ENST00000565324 CCDC179H3BU77 68 aa3.86□□□□□ -1.79
SMG1-211ENST00000565324 C11orf53Q8IXP5 236 aa3.86□□□□□ -1.79
SMG1-211ENST00000565324 DEFB136Q30KP8 78 aa3.86□□□□□ -1.79
SMG1-211ENST00000565324 PCNTO95613 3336 aa3.86□□□□□ -1.79
SMG1-211ENST00000565324 KRTAP27-1Q3LI81 207 aa3.86□□□□□ -1.79
SMG1-211ENST00000565324 C1orf158Q8N1D5 194 aa3.86□□□□□ -1.79
SMG1-211ENST00000565324 YPEL4Q96NS1 127 aa3.86□□□□□ -1.79
SMG1-211ENST00000565324 M0R378 163 aa3.85□□□□□ -1.79
SMG1-211ENST00000565324 C3orf84H3BNL1 204 aa3.85□□□□□ -1.79
SMG1-211ENST00000565324 Q8N976 141 aa3.85□□□□□ -1.79
SMG1-211ENST00000565324 LINC00467Q9BRT7 94 aa3.85□□□□□ -1.79
SMG1-211ENST00000565324 PRO0628Q9UI54 55 aa3.85□□□□□ -1.79
SMG1-211ENST00000565324 UBE2D3P61077 147 aa3.85□□□□□ -1.79
SMG1-211ENST00000565324 ZNF503-AS2A6NEH8 195 aa3.85□□□□□ -1.79
SMG1-211ENST00000565324 PRAC2D3DTV9 90 aa3.85□□□□□ -1.79
SMG1-211ENST00000565324 IGLV2-23P01705 113 aa3.85□□□□□ -1.79
SMG1-211ENST00000565324 EIF4EBP1Q13541 118 aaPredicted RBP3.85□□□□□ -1.79
SMG1-211ENST00000565324 FAM19A5Q7Z5A7 132 aaPredicted RBP3.85□□□□□ -1.79
SMG1-211ENST00000565324 TRBV7-6A0A0J9YX20 115 aa3.85□□□□□ -1.79
SMG1-211ENST00000565324 PROK2Q9HC23 129 aa3.85□□□□□ -1.79
SMG1-211ENST00000565324 A0A087WZ39 114 aa3.84□□□□□ -1.79
SMG1-211ENST00000565324 EBI3Q14213 229 aa3.84□□□□□ -1.79
SMG1-211ENST00000565324 SPRY2O43597 315 aa3.84□□□□□ -1.79
SMG1-211ENST00000565324 SCXQ7RTU7 201 aa3.84□□□□□ -1.79
SMG1-211ENST00000565324 PRSS33Q8NF86 280 aa3.84□□□□□ -1.79
SMG1-211ENST00000565324 CELA1Q9UNI1 258 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 255.2 ms