RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 PLP1P60201 277 aa1.42□□□□□ -2.18
SCFD1-219ENST00000556413 RAB2AP61019 212 aa1.42□□□□□ -2.18
SCFD1-219ENST00000556413 UBE2L3P68036 154 aaKnown RBP1.42□□□□□ -2.18
SCFD1-219ENST00000556413 LINC01556Q5JQF7 62 aa1.42□□□□□ -2.18
SCFD1-219ENST00000556413 FAM74A4Q5TZK3 123 aa1.42□□□□□ -2.18
SCFD1-219ENST00000556413 CFAP126Q5VTH2 177 aa1.42□□□□□ -2.18
SCFD1-219ENST00000556413 SAMD13Q5VXD3 122 aa1.42□□□□□ -2.18
SCFD1-219ENST00000556413 TOMM5Q8N4H5 51 aa1.42□□□□□ -2.18
SCFD1-219ENST00000556413 HSD17B11Q8NBQ5 300 aa1.42□□□□□ -2.18
SCFD1-219ENST00000556413 OR1L4Q8NGR5 311 aa1.42□□□□□ -2.18
SCFD1-219ENST00000556413 DYNC2LI1Q8TCX1 351 aa1.42□□□□□ -2.18
SCFD1-219ENST00000556413 ZCCHC13Q8WW36 166 aaKnown RBP1.42□□□□□ -2.18
SCFD1-219ENST00000556413 FXYD5Q96DB9 178 aa1.42□□□□□ -2.18
SCFD1-219ENST00000556413 C20orf144Q9BQM9 153 aa1.42□□□□□ -2.18
SCFD1-219ENST00000556413 TXNDC17Q9BRA2 123 aa1.42□□□□□ -2.18
SCFD1-219ENST00000556413 NPCDR1Q9BY65 106 aa1.42□□□□□ -2.18
SCFD1-219ENST00000556413 SLIRPQ9GZT3 109 aaKnown RBP1.42□□□□□ -2.18
SCFD1-219ENST00000556413 C11orf1Q9H5F2 150 aa1.42□□□□□ -2.18
SCFD1-219ENST00000556413 NPVFQ9HCQ7 196 aa1.42□□□□□ -2.18
SCFD1-219ENST00000556413 UQCC1Q9NVA1 299 aa1.42□□□□□ -2.18
SCFD1-219ENST00000556413 OR5AC2Q9NZP5 309 aa1.42□□□□□ -2.18
SCFD1-219ENST00000556413 FSIP2Q5CZC0 6907 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 IGKV3OR2-268A0A0C4DH90 116 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 DUXBA0A1W2PPF3 345 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 TMEM223A0PJW6 202 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 TMEM262E9PQX1 116 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 M0R2P5 195 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 NDUFB6O95139 128 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 CFDP00746 253 aaPredicted RBP1.41□□□□□ -2.18
SCFD1-219ENST00000556413 OXTP01178 125 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 GCGP01275 180 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 ORM1P02763 201 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 NBEAP1P0C6P0 100 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 HIST1H1EP10412 219 aaKnown RBP1.41□□□□□ -2.18
SCFD1-219ENST00000556413 INPP1P49441 399 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 UBE2G2P60604 165 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 MRPS10P82664 201 aaKnown RBP1.41□□□□□ -2.18
SCFD1-219ENST00000556413 RPL19P84098 196 aaKnown RBP1.41□□□□□ -2.18
SCFD1-219ENST00000556413 ZNF266Q14584 549 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 RHOHQ15669 191 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 LGALSLQ3ZCW2 172 aaPredicted RBP1.41□□□□□ -2.18
SCFD1-219ENST00000556413 MPV17L2Q567V2 206 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 TMEM128Q5BJH2 165 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 IBA57Q5T440 356 aaKnown RBP1.41□□□□□ -2.18
SCFD1-219ENST00000556413 LELP1Q5T871 98 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 TRIQKQ629K1 86 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 ENHOQ6UWT2 76 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 TEX43Q6ZNM6 134 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 PRNTQ86SH4 94 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 IQCF2Q8IXL9 164 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 C10orf126Q8N4M7 172 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 OR5C1Q8NGR4 320 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 ATP6V0E2Q8NHE4 81 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 ASB13Q8WXK3 278 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 LINC00526Q96FQ7 95 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 SMIM8Q96KF7 97 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 SCGB3A2Q96PL1 93 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 ODF3Q96PU9 254 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 MRPS26Q9BYN8 205 aaKnown RBP1.41□□□□□ -2.18
SCFD1-219ENST00000556413 NMES1Q9C002 83 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 GTSF1LQ9H1H1 148 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 OR51M1Q9H341 326 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 TREM1Q9NP99 234 aa1.41□□□□□ -2.18
SCFD1-219ENST00000556413 RSL24D1Q9UHA3 163 aaKnown RBP1.41□□□□□ -2.18
SCFD1-219ENST00000556413 CARHSP1Q9Y2V2 147 aaKnown RBP1.41□□□□□ -2.18
SCFD1-219ENST00000556413 IGLV1-50A0A075B6I6 118 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 A0A1B0GV50 99 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 PGPA6NDG6 321 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 GGTLC3B5MD39 225 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 M0R381 172 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 PTTG1O95997 202 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 CRPP02741 224 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 ANGP03950 147 aaKnown RBP1.4□□□□□ -2.19
SCFD1-219ENST00000556413 LINC00694P0DN24 101 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 RNASE3P12724 160 aaKnown RBP1.4□□□□□ -2.19
SCFD1-219ENST00000556413 IL7P13232 177 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 FAUP35544 74 aaKnown RBP1.4□□□□□ -2.19
SCFD1-219ENST00000556413 CSN1S1P47710 185 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 SULT1A1P50225 295 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 SSBP1Q04837 148 aaKnown RBP1.4□□□□□ -2.19
SCFD1-219ENST00000556413 SPANXN2Q5MJ10 180 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 Q6AWC8 147 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 NIT1Q86X76 327 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 STX12Q86Y82 276 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 INO80EQ8NBZ0 244 aaPredicted RBP1.4□□□□□ -2.19
SCFD1-219ENST00000556413 DPH3Q96FX2 82 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 PFDN5Q99471 154 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 PRADC1Q9BSG0 188 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 SH3BGRL3Q9H299 93 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 LYRM2Q9NU23 88 aaPredicted RBP1.4□□□□□ -2.19
SCFD1-219ENST00000556413 TMEM14CQ9P0S9 112 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 MUC17Q685J3 4493 aa1.4□□□□□ -2.19
SCFD1-219ENST00000556413 A0A087WX48 190 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 TRAV8-3A0A0A6YYJ7 113 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 TRAV21A0A0B4J279 112 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 PLA2G10O15496 165 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 SH2D1AO60880 128 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 PFN1P07737 140 aaKnown RBP1.39□□□□□ -2.19
SCFD1-219ENST00000556413 MGPP08493 103 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 ARL14EPLP0DKL9 152 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms