RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 A0A096LPF7 62 aa7.82□□□□□ -1.16
SHMT2-220ENST00000555634 TRAV8-6A0A0B4J262 113 aa7.82□□□□□ -1.16
SHMT2-220ENST00000555634 IGHV3-38A0A0C4DH36 116 aa7.82□□□□□ -1.16
SHMT2-220ENST00000555634 GAS8-AS1O95177 125 aa7.82□□□□□ -1.16
SHMT2-220ENST00000555634 LINC00614P0C842 121 aa7.82□□□□□ -1.16
SHMT2-220ENST00000555634 LINC00694P0DN24 101 aa7.82□□□□□ -1.16
SHMT2-220ENST00000555634 CCL18P55774 89 aa7.82□□□□□ -1.16
SHMT2-220ENST00000555634 IQCJQ1A5X6 159 aa7.82□□□□□ -1.16
SHMT2-220ENST00000555634 UBE2DNLQ8IWF7 75 aa7.82□□□□□ -1.16
SHMT2-220ENST00000555634 TMEM243Q9BU79 118 aa7.82□□□□□ -1.16
SHMT2-220ENST00000555634 BTF3P20290 206 aaKnown RBP7.81□□□□□ -1.16
SHMT2-220ENST00000555634 POLR2KP53803 58 aaKnown RBP7.81□□□□□ -1.16
SHMT2-220ENST00000555634 NDUFA6P56556 154 aa7.81□□□□□ -1.16
SHMT2-220ENST00000555634 AMMECR1LQ6DCA0 310 aa7.81□□□□□ -1.16
SHMT2-220ENST00000555634 TMA7Q9Y2S6 64 aaKnown RBP7.81□□□□□ -1.16
SHMT2-220ENST00000555634 PRKDCP78527 4128 aaKnown RBP7.8□□□□□ -1.16
SHMT2-220ENST00000555634 TRBV6-8A0A0A6YYG3 113 aa7.8□□□□□ -1.16
SHMT2-220ENST00000555634 SERF1AO75920 110 aa7.8□□□□□ -1.16
SHMT2-220ENST00000555634 S100A2P29034 98 aa7.8□□□□□ -1.16
SHMT2-220ENST00000555634 TIRAPP58753 221 aa7.8□□□□□ -1.16
SHMT2-220ENST00000555634 CHCHD5Q9BSY4 110 aa7.8□□□□□ -1.16
SHMT2-220ENST00000555634 CYSLTR1Q9Y271 337 aa7.8□□□□□ -1.16
SHMT2-220ENST00000555634 C3orf84H3BNL1 204 aa7.79□□□□□ -1.16
SHMT2-220ENST00000555634 H7C423 109 aa7.79□□□□□ -1.16
SHMT2-220ENST00000555634 TSHBP01222 138 aa7.79□□□□□ -1.16
SHMT2-220ENST00000555634 HBDP02042 147 aa7.79□□□□□ -1.16
SHMT2-220ENST00000555634 LELP1Q5T871 98 aa7.79□□□□□ -1.16
SHMT2-220ENST00000555634 ZFAND6Q6FIF0 208 aa7.79□□□□□ -1.16
SHMT2-220ENST00000555634 NIT1Q86X76 327 aa7.79□□□□□ -1.16
SHMT2-220ENST00000555634 TMEM101Q96IK0 257 aa7.79□□□□□ -1.16
SHMT2-220ENST00000555634 A0A087WX48 190 aa7.78□□□□□ -1.16
SHMT2-220ENST00000555634 PAPPA-AS1Q5QFB9 102 aa7.78□□□□□ -1.16
SHMT2-220ENST00000555634 DGAT2L7PQ6IED9 249 aa7.78□□□□□ -1.16
SHMT2-220ENST00000555634 IGLV2-18A0A075B6J9 118 aa7.77□□□□□ -1.17
SHMT2-220ENST00000555634 LINC01546A6NGU7 62 aa7.77□□□□□ -1.17
SHMT2-220ENST00000555634 ZNF25P17030 456 aaPredicted RBP7.77□□□□□ -1.17
SHMT2-220ENST00000555634 Q6ZN92 141 aa7.77□□□□□ -1.17
SHMT2-220ENST00000555634 Q9UF83 564 aa7.77□□□□□ -1.17
SHMT2-220ENST00000555634 HSPB8Q9UJY1 196 aa7.77□□□□□ -1.17
SHMT2-220ENST00000555634 TMEM262E9PQX1 116 aa7.76□□□□□ -1.17
SHMT2-220ENST00000555634 COA6Q5JTJ3 125 aaKnown RBP7.76□□□□□ -1.17
SHMT2-220ENST00000555634 LYPD5Q6UWN5 251 aa7.76□□□□□ -1.17
SHMT2-220ENST00000555634 C2orf66Q6UXQ4 117 aa7.76□□□□□ -1.17
SHMT2-220ENST00000555634 SPANXA1Q9NS26 97 aa7.76□□□□□ -1.17
SHMT2-220ENST00000555634 MRPS16Q9Y3D3 137 aaKnown RBP7.76□□□□□ -1.17
SHMT2-220ENST00000555634 ATP5LO75964 103 aa7.75□□□□□ -1.17
SHMT2-220ENST00000555634 C20orf203Q8NBC4 194 aa7.75□□□□□ -1.17
SHMT2-220ENST00000555634 OR5A1Q8NGJ0 315 aa7.75□□□□□ -1.17
SHMT2-220ENST00000555634 CHCHD7Q9BUK0 85 aa7.75□□□□□ -1.17
SHMT2-220ENST00000555634 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.74□□□□□ -1.17
SHMT2-220ENST00000555634 IGKV2-29A2NJV5 120 aaPredicted RBP7.74□□□□□ -1.17
SHMT2-220ENST00000555634 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.74□□□□□ -1.17
SHMT2-220ENST00000555634 LEPROTL1O95214 131 aa7.74□□□□□ -1.17
SHMT2-220ENST00000555634 NPSP0C0P6 89 aa7.74□□□□□ -1.17
SHMT2-220ENST00000555634 ESDP10768 282 aa7.74□□□□□ -1.17
SHMT2-220ENST00000555634 DEFB104AQ8WTQ1 72 aa7.74□□□□□ -1.17
SHMT2-220ENST00000555634 TOMM6Q96B49 74 aa7.74□□□□□ -1.17
SHMT2-220ENST00000555634 PACRGQ96M98 296 aaPredicted RBP7.74□□□□□ -1.17
SHMT2-220ENST00000555634 SCGB3A1Q96QR1 104 aa7.74□□□□□ -1.17
SHMT2-220ENST00000555634 C2orf88Q9BSF0 95 aa7.74□□□□□ -1.17
SHMT2-220ENST00000555634 APLNQ9ULZ1 77 aa7.74□□□□□ -1.17
SHMT2-220ENST00000555634 TRAV9-2A0A087WT02 112 aa7.73□□□□□ -1.17
SHMT2-220ENST00000555634 SIVA1O15304 175 aa7.73□□□□□ -1.17
SHMT2-220ENST00000555634 CRPP02741 224 aa7.73□□□□□ -1.17
SHMT2-220ENST00000555634 FGF6P10767 208 aa7.73□□□□□ -1.17
SHMT2-220ENST00000555634 GAGE6Q13070 117 aa7.73□□□□□ -1.17
SHMT2-220ENST00000555634 PMCHL1Q16048 86 aa7.73□□□□□ -1.17
SHMT2-220ENST00000555634 PDZD11Q5EBL8 140 aa7.73□□□□□ -1.17
SHMT2-220ENST00000555634 TMEM141Q96I45 108 aa7.73□□□□□ -1.17
SHMT2-220ENST00000555634 TIMM21Q9BVV7 248 aa7.73□□□□□ -1.17
SHMT2-220ENST00000555634 KRTAP17-1Q9BYP8 105 aa7.73□□□□□ -1.17
SHMT2-220ENST00000555634 SNRPEP62304 92 aaKnown RBP7.72□□□□□ -1.17
SHMT2-220ENST00000555634 ESRGQ1W209 222 aa7.72□□□□□ -1.17
SHMT2-220ENST00000555634 CASC10Q5T4H9 136 aa7.72□□□□□ -1.17
SHMT2-220ENST00000555634 NTM-AS1Q6ZSK4 140 aa7.72□□□□□ -1.17
SHMT2-220ENST00000555634 ERASQ7Z444 233 aa7.72□□□□□ -1.17
SHMT2-220ENST00000555634 MRPL52Q86TS9 123 aaKnown RBP7.72□□□□□ -1.17
SHMT2-220ENST00000555634 C10orf126Q8N4M7 172 aa7.72□□□□□ -1.17
SHMT2-220ENST00000555634 TIMM17AQ99595 171 aa7.72□□□□□ -1.17
SHMT2-220ENST00000555634 UPK3BQ9BT76 320 aa7.72□□□□□ -1.17
SHMT2-220ENST00000555634 MAP1LC3CQ9BXW4 147 aa7.72□□□□□ -1.17
SHMT2-220ENST00000555634 K7EP13 123 aa7.71□□□□□ -1.18
SHMT2-220ENST00000555634 RPL39P62891 51 aaKnown RBP7.71□□□□□ -1.18
SHMT2-220ENST00000555634 TTC32Q5I0X7 151 aa7.71□□□□□ -1.18
SHMT2-220ENST00000555634 TEX43Q6ZNM6 134 aa7.71□□□□□ -1.18
SHMT2-220ENST00000555634 FAM19A2Q8N3H0 131 aa7.71□□□□□ -1.18
SHMT2-220ENST00000555634 URB1-AS1Q96HZ7 61 aa7.71□□□□□ -1.18
SHMT2-220ENST00000555634 PYGO1Q9Y3Y4 419 aa7.71□□□□□ -1.18
SHMT2-220ENST00000555634 LINC00588Q9Y4M8 146 aa7.71□□□□□ -1.18
SHMT2-220ENST00000555634 CSDC2Q9Y534 153 aaKnown RBP7.71□□□□□ -1.18
SHMT2-220ENST00000555634 C20orf202A1L168 122 aa7.7□□□□□ -1.18
SHMT2-220ENST00000555634 ANGP03950 147 aaKnown RBP7.7□□□□□ -1.18
SHMT2-220ENST00000555634 FABP4P15090 132 aa7.7□□□□□ -1.18
SHMT2-220ENST00000555634 WFDC10BQ8IUB3 73 aa7.7□□□□□ -1.18
SHMT2-220ENST00000555634 IFI27L1Q96BM0 104 aa7.7□□□□□ -1.18
SHMT2-220ENST00000555634 UBE2D4Q9Y2X8 147 aa7.7□□□□□ -1.18
SHMT2-220ENST00000555634 HUWE1Q7Z6Z7 4374 aaKnown RBP7.7□□□□□ -1.18
SHMT2-220ENST00000555634 DNAH9Q9NYC9 4486 aa7.69□□□□□ -1.18
SHMT2-220ENST00000555634 A0A1B0GUV1 79 aa7.69□□□□□ -1.18
SHMT2-220ENST00000555634 IFITM10A6NMD0 228 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms