RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 GAGE6Q13070 117 aa9.18□□□□□ -0.94
LTBR-213ENST00000544454 ATRAIDQ6UW56 229 aa9.18□□□□□ -0.94
LTBR-213ENST00000544454 BTF3L4Q96K17 158 aa9.18□□□□□ -0.94
LTBR-213ENST00000544454 TM2D2Q9BX73 214 aa9.18□□□□□ -0.94
LTBR-213ENST00000544454 CARHSP1Q9Y2V2 147 aaKnown RBP9.18□□□□□ -0.94
LTBR-213ENST00000544454 PMCHP20382 165 aa9.17□□□□□ -0.94
LTBR-213ENST00000544454 CKS2P33552 79 aa9.17□□□□□ -0.94
LTBR-213ENST00000544454 RPS10P46783 165 aaKnown RBP9.17□□□□□ -0.94
LTBR-213ENST00000544454 POLR2KP53803 58 aaKnown RBP9.17□□□□□ -0.94
LTBR-213ENST00000544454 RBX1P62877 108 aa9.17□□□□□ -0.94
LTBR-213ENST00000544454 MPV17L2Q567V2 206 aa9.17□□□□□ -0.94
LTBR-213ENST00000544454 NRACQ8N912 160 aa9.17□□□□□ -0.94
LTBR-213ENST00000544454 TMEM70Q9BUB7 260 aa9.17□□□□□ -0.94
LTBR-213ENST00000544454 TMEM242Q9NWH2 141 aa9.17□□□□□ -0.94
LTBR-213ENST00000544454 COX11Q9Y6N1 276 aa9.17□□□□□ -0.94
LTBR-213ENST00000544454 PKHD1P08F94 4074 aa9.16□□□□□ -0.94
LTBR-213ENST00000544454 TRBV24-1A0A075B6N3 115 aa9.16□□□□□ -0.94
LTBR-213ENST00000544454 TRBV27A0A0K0K1C4 114 aa9.16□□□□□ -0.94
LTBR-213ENST00000544454 A0A1B0GUV1 79 aa9.16□□□□□ -0.94
LTBR-213ENST00000544454 SMKR1H3BMG3 65 aa9.16□□□□□ -0.94
LTBR-213ENST00000544454 VCYO14598 125 aa9.16□□□□□ -0.94
LTBR-213ENST00000544454 EREGO14944 169 aa9.16□□□□□ -0.94
LTBR-213ENST00000544454 PSCAO43653 123 aa9.16□□□□□ -0.94
LTBR-213ENST00000544454 PPBPP02775 128 aa9.16□□□□□ -0.94
LTBR-213ENST00000544454 Q0VG73 95 aa9.16□□□□□ -0.94
LTBR-213ENST00000544454 Q8N976 141 aa9.16□□□□□ -0.94
LTBR-213ENST00000544454 DEFB104AQ8WTQ1 72 aa9.16□□□□□ -0.94
LTBR-213ENST00000544454 UBE2WQ96B02 151 aa9.16□□□□□ -0.94
LTBR-213ENST00000544454 RMI2Q96E14 147 aa9.16□□□□□ -0.94
LTBR-213ENST00000544454 UBE2L6O14933 153 aa9.15□□□□□ -0.94
LTBR-213ENST00000544454 ANGP03950 147 aaKnown RBP9.15□□□□□ -0.94
LTBR-213ENST00000544454 SUMO2P61956 95 aaKnown RBP9.15□□□□□ -0.94
LTBR-213ENST00000544454 C20orf78Q9BR46 151 aa9.15□□□□□ -0.94
LTBR-213ENST00000544454 TRAV9-1A0A075B6T8 112 aa9.14□□□□□ -0.95
LTBR-213ENST00000544454 A0A087WTM6 91 aa9.14□□□□□ -0.95
LTBR-213ENST00000544454 C7orf77A4D0Y5 90 aa9.14□□□□□ -0.95
LTBR-213ENST00000544454 H7C423 109 aa9.14□□□□□ -0.95
LTBR-213ENST00000544454 APCSP02743 223 aa9.14□□□□□ -0.95
LTBR-213ENST00000544454 RHEBQ15382 184 aa9.14□□□□□ -0.95
LTBR-213ENST00000544454 ENHOQ6UWT2 76 aa9.14□□□□□ -0.95
LTBR-213ENST00000544454 CLRN3Q8NCR9 226 aa9.14□□□□□ -0.95
LTBR-213ENST00000544454 DYNC1H1Q14204 4646 aaKnown RBP9.13□□□□□ -0.95
LTBR-213ENST00000544454 D6R8Y8 96 aa9.13□□□□□ -0.95
LTBR-213ENST00000544454 PHOX2AO14813 284 aa9.13□□□□□ -0.95
LTBR-213ENST00000544454 TSHBP01222 138 aa9.13□□□□□ -0.95
LTBR-213ENST00000544454 CRPP02741 224 aa9.13□□□□□ -0.95
LTBR-213ENST00000544454 RPL32P62910 135 aaKnown RBP9.13□□□□□ -0.95
LTBR-213ENST00000544454 TMEM136Q6ZRR5 245 aa9.13□□□□□ -0.95
LTBR-213ENST00000544454 LINC00269Q8N2A0 174 aa9.13□□□□□ -0.95
LTBR-213ENST00000544454 PRR34Q9NV39 138 aa9.13□□□□□ -0.95
LTBR-213ENST00000544454 LRCOL1A6NCL2 159 aa9.12□□□□□ -0.95
LTBR-213ENST00000544454 TNFRSF6BO95407 300 aa9.12□□□□□ -0.95
LTBR-213ENST00000544454 ESDP10768 282 aa9.12□□□□□ -0.95
LTBR-213ENST00000544454 S100PP25815 95 aa9.12□□□□□ -0.95
LTBR-213ENST00000544454 MIAQ16674 131 aa9.12□□□□□ -0.95
LTBR-213ENST00000544454 SPATA12Q7Z6I5 190 aa9.12□□□□□ -0.95
LTBR-213ENST00000544454 ORMDL3Q8N138 153 aa9.12□□□□□ -0.95
LTBR-213ENST00000544454 C20orf203Q8NBC4 194 aa9.12□□□□□ -0.95
LTBR-213ENST00000544454 KIR2DL4Q99706 377 aa9.12□□□□□ -0.95
LTBR-213ENST00000544454 PGPEP1Q9NXJ5 209 aa9.12□□□□□ -0.95
LTBR-213ENST00000544454 IGKV2D-24A0A075B6R9 120 aa9.11□□□□□ -0.95
LTBR-213ENST00000544454 NDUFA5Q16718 116 aa9.11□□□□□ -0.95
LTBR-213ENST00000544454 RPS10P5Q9NQ39 176 aa9.11□□□□□ -0.95
LTBR-213ENST00000544454 IGLV4-60A0A075B6I1 120 aa9.1□□□□□ -0.95
LTBR-213ENST00000544454 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.1□□□□□ -0.95
LTBR-213ENST00000544454 IGKV2-29A2NJV5 120 aaPredicted RBP9.1□□□□□ -0.95
LTBR-213ENST00000544454 TCAPO15273 167 aa9.1□□□□□ -0.95
LTBR-213ENST00000544454 APOC3P02656 99 aa9.1□□□□□ -0.95
LTBR-213ENST00000544454 FCER1GP30273 86 aa9.1□□□□□ -0.95
LTBR-213ENST00000544454 KRTAP10-2P60368 255 aa9.1□□□□□ -0.95
LTBR-213ENST00000544454 AMMECR1LQ6DCA0 310 aa9.1□□□□□ -0.95
LTBR-213ENST00000544454 SVBPQ8N300 66 aa9.1□□□□□ -0.95
LTBR-213ENST00000544454 C1orf43Q9BWL3 253 aa9.1□□□□□ -0.95
LTBR-213ENST00000544454 LAMTOR2Q9Y2Q5 125 aa9.1□□□□□ -0.95
LTBR-213ENST00000544454 C16orf90A8MZG2 172 aa9.09□□□□□ -0.95
LTBR-213ENST00000544454 NPYP01303 97 aa9.09□□□□□ -0.95
LTBR-213ENST00000544454 FGF6P10767 208 aa9.09□□□□□ -0.95
LTBR-213ENST00000544454 ZNF25P17030 456 aaPredicted RBP9.09□□□□□ -0.95
LTBR-213ENST00000544454 REG3AQ06141 175 aa9.09□□□□□ -0.95
LTBR-213ENST00000544454 MAPKAPK5-AS1Q8N8E1 139 aa9.09□□□□□ -0.95
LTBR-213ENST00000544454 PRELID3AQ96N28 172 aa9.09□□□□□ -0.95
LTBR-213ENST00000544454 TRAV8-4A0A0B4J246 113 aa9.08□□□□□ -0.96
LTBR-213ENST00000544454 PRSS47A8MTI9 375 aa9.08□□□□□ -0.96
LTBR-213ENST00000544454 SNAPINO95295 136 aa9.08□□□□□ -0.96
LTBR-213ENST00000544454 CDPF1Q6NVV7 123 aa9.08□□□□□ -0.96
LTBR-213ENST00000544454 RNASEKQ6P5S7 137 aaKnown RBP9.08□□□□□ -0.96
LTBR-213ENST00000544454 SMIM2Q9BVW6 85 aa9.08□□□□□ -0.96
LTBR-213ENST00000544454 CLPSL2Q6UWE3 100 aa9.07□□□□□ -0.96
LTBR-213ENST00000544454 MRPL52Q86TS9 123 aaKnown RBP9.07□□□□□ -0.96
LTBR-213ENST00000544454 Q8N814 137 aa9.07□□□□□ -0.96
LTBR-213ENST00000544454 BAALCQ8WXS3 180 aa9.07□□□□□ -0.96
LTBR-213ENST00000544454 TMEM101Q96IK0 257 aa9.07□□□□□ -0.96
LTBR-213ENST00000544454 GNB1LQ9BYB4 327 aa9.07□□□□□ -0.96
LTBR-213ENST00000544454 DNAH5Q8TE73 4624 aa9.07□□□□□ -0.96
LTBR-213ENST00000544454 LRP1BQ9NZR2 4599 aa9.07□□□□□ -0.96
LTBR-213ENST00000544454 SMAGPQ0VAQ4 97 aa9.06□□□□□ -0.96
LTBR-213ENST00000544454 COX19Q49B96 90 aa9.06□□□□□ -0.96
LTBR-213ENST00000544454 OR5A1Q8NGJ0 315 aa9.06□□□□□ -0.96
LTBR-213ENST00000544454 NTN5Q8WTR8 489 aaPredicted RBP9.06□□□□□ -0.96
LTBR-213ENST00000544454 TMEM18Q96B42 140 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms