RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 SDIM1Q6ZPB5 146 aa12.64□□□□□ -0.39
TNFRSF1B-204ENST00000536782 OCC1Q8TAD7 63 aa12.64□□□□□ -0.39
TNFRSF1B-204ENST00000536782 EIF5A2Q9GZV4 153 aaKnown RBP12.64□□□□□ -0.39
TNFRSF1B-204ENST00000536782 TRAV8-4A0A0B4J246 113 aa12.63□□□□□ -0.39
TNFRSF1B-204ENST00000536782 A0A1B0GUV1 79 aa12.63□□□□□ -0.39
TNFRSF1B-204ENST00000536782 K7EN84 100 aa12.63□□□□□ -0.39
TNFRSF1B-204ENST00000536782 RASL11AQ6T310 242 aa12.63□□□□□ -0.39
TNFRSF1B-204ENST00000536782 C20orf203Q8NBC4 194 aa12.63□□□□□ -0.39
TNFRSF1B-204ENST00000536782 NUDT10Q8NFP7 164 aa12.63□□□□□ -0.39
TNFRSF1B-204ENST00000536782 NUDT11Q96G61 164 aa12.63□□□□□ -0.39
TNFRSF1B-204ENST00000536782 TMEM243Q9BU79 118 aa12.63□□□□□ -0.39
TNFRSF1B-204ENST00000536782 TRGC1P0CF51 173 aa12.62□□□□□ -0.39
TNFRSF1B-204ENST00000536782 CNBPP62633 177 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1B-204ENST00000536782 hDV102S1A0JD36 115 aa12.61□□□□□ -0.39
TNFRSF1B-204ENST00000536782 PANO1I0J062 215 aa12.61□□□□□ -0.39
TNFRSF1B-204ENST00000536782 HNRNPA3P51991 378 aaKnown RBP12.61□□□□□ -0.39
TNFRSF1B-204ENST00000536782 TEX261Q6UWH6 196 aa12.61□□□□□ -0.39
TNFRSF1B-204ENST00000536782 PGLYRP4Q96LB8 373 aa12.61□□□□□ -0.39
TNFRSF1B-204ENST00000536782 RPP21Q9H633 154 aaKnown RBP12.61□□□□□ -0.39
TNFRSF1B-204ENST00000536782 NIT2Q9NQR4 276 aa12.61□□□□□ -0.39
TNFRSF1B-204ENST00000536782 IGLV4-60A0A075B6I1 120 aa12.6□□□□□ -0.39
TNFRSF1B-204ENST00000536782 WDR73Q6P4I2 378 aa12.6□□□□□ -0.39
TNFRSF1B-204ENST00000536782 LYZL1Q6UWQ5 148 aa12.6□□□□□ -0.39
TNFRSF1B-204ENST00000536782 RNASE7Q9H1E1 156 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1B-204ENST00000536782 DPH3P1Q9H4G8 78 aa12.6□□□□□ -0.39
TNFRSF1B-204ENST00000536782 UBE2L6O14933 153 aa12.59□□□□□ -0.39
TNFRSF1B-204ENST00000536782 NTF3P20783 257 aa12.59□□□□□ -0.39
TNFRSF1B-204ENST00000536782 CTRLP40313 264 aa12.59□□□□□ -0.39
TNFRSF1B-204ENST00000536782 CEBPGP53567 150 aa12.59□□□□□ -0.39
TNFRSF1B-204ENST00000536782 FAM231DQ6ZW35 169 aa12.59□□□□□ -0.39
TNFRSF1B-204ENST00000536782 CNFNQ9BYD5 112 aa12.59□□□□□ -0.39
TNFRSF1B-204ENST00000536782 GFRA4Q9GZZ7 299 aa12.59□□□□□ -0.39
TNFRSF1B-204ENST00000536782 AP5S1Q9NUS5 200 aa12.59□□□□□ -0.39
TNFRSF1B-204ENST00000536782 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1B-204ENST00000536782 SRP19P09132 144 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1B-204ENST00000536782 SMIM7Q9BQ49 75 aa12.58□□□□□ -0.4
TNFRSF1B-204ENST00000536782 PLA2G2DQ9UNK4 145 aa12.58□□□□□ -0.4
TNFRSF1B-204ENST00000536782 IGHV3-64A0A075B6Q5 118 aa12.57□□□□□ -0.4
TNFRSF1B-204ENST00000536782 CIRBPQ14011 172 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1B-204ENST00000536782 COTL1Q14019 142 aa12.57□□□□□ -0.4
TNFRSF1B-204ENST00000536782 DPH3Q96FX2 82 aa12.57□□□□□ -0.4
TNFRSF1B-204ENST00000536782 ZNF727A8MUV8 499 aa12.56□□□□□ -0.4
TNFRSF1B-204ENST00000536782 AMTP48728 403 aa12.56□□□□□ -0.4
TNFRSF1B-204ENST00000536782 CT83Q5H943 113 aa12.56□□□□□ -0.4
TNFRSF1B-204ENST00000536782 GATCO43716 136 aaKnown RBP12.55□□□□□ -0.4
TNFRSF1B-204ENST00000536782 LINC01551Q86U37 167 aa12.55□□□□□ -0.4
TNFRSF1B-204ENST00000536782 A8MWL6 223 aa12.54□□□□□ -0.4
TNFRSF1B-204ENST00000536782 SLPIP03973 132 aa12.54□□□□□ -0.4
TNFRSF1B-204ENST00000536782 TWIST1Q15672 202 aa12.54□□□□□ -0.4
TNFRSF1B-204ENST00000536782 FAM74A3Q4VXF1 159 aa12.54□□□□□ -0.4
TNFRSF1B-204ENST00000536782 SMDT1Q9H4I9 107 aa12.54□□□□□ -0.4
TNFRSF1B-204ENST00000536782 GTSF1Q8WW33 167 aa12.53□□□□□ -0.4
TNFRSF1B-204ENST00000536782 RNF185Q96GF1 192 aa12.53□□□□□ -0.4
TNFRSF1B-204ENST00000536782 PEA15Q15121 130 aa12.52□□□□□ -0.41
TNFRSF1B-204ENST00000536782 Q6ZRU5 148 aa12.52□□□□□ -0.41
TNFRSF1B-204ENST00000536782 A0A087WYN8 130 aa12.51□□□□□ -0.41
TNFRSF1B-204ENST00000536782 GAGE12HA6NDE8 117 aa12.51□□□□□ -0.41
TNFRSF1B-204ENST00000536782 CHTF8P0CG12 524 aa12.51□□□□□ -0.41
TNFRSF1B-204ENST00000536782 FOXA3P55318 350 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1B-204ENST00000536782 CFAP161Q6P656 301 aa12.51□□□□□ -0.41
TNFRSF1B-204ENST00000536782 GATD1Q8NB37 220 aa12.51□□□□□ -0.41
TNFRSF1B-204ENST00000536782 OSTCQ9NRP0 149 aa12.51□□□□□ -0.41
TNFRSF1B-204ENST00000536782 TRAV26-2A0A0B4J265 109 aa12.5□□□□□ -0.41
TNFRSF1B-204ENST00000536782 IGKV3OR2-268A0A0C4DH90 116 aa12.5□□□□□ -0.41
TNFRSF1B-204ENST00000536782 SPACA4Q8TDM5 124 aa12.5□□□□□ -0.41
TNFRSF1B-204ENST00000536782 FAM231BA6NCW3 169 aa12.49□□□□□ -0.41
TNFRSF1B-204ENST00000536782 TMEM241Q24JQ0 296 aa12.49□□□□□ -0.41
TNFRSF1B-204ENST00000536782 AMMECR1LQ6DCA0 310 aa12.49□□□□□ -0.41
TNFRSF1B-204ENST00000536782 C15orf56Q8N910 161 aa12.49□□□□□ -0.41
TNFRSF1B-204ENST00000536782 SMIM15Q7Z3B0 74 aa12.48□□□□□ -0.41
TNFRSF1B-204ENST00000536782 TSKUQ8WUA8 353 aa12.48□□□□□ -0.41
TNFRSF1B-204ENST00000536782 C9JQL5 133 aa12.47□□□□□ -0.41
TNFRSF1B-204ENST00000536782 NCR2O95944 276 aa12.47□□□□□ -0.41
TNFRSF1B-204ENST00000536782 MT1HL1P0DM35 61 aa12.47□□□□□ -0.41
TNFRSF1B-204ENST00000536782 RPS10P46783 165 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1B-204ENST00000536782 ISOC2Q96AB3 205 aa12.47□□□□□ -0.41
TNFRSF1B-204ENST00000536782 BORCS7Q96B45 105 aa12.47□□□□□ -0.41
TNFRSF1B-204ENST00000536782 PLAC8Q9NZF1 115 aa12.47□□□□□ -0.41
TNFRSF1B-204ENST00000536782 NAT8Q9UHE5 227 aa12.47□□□□□ -0.41
TNFRSF1B-204ENST00000536782 H7C423 109 aa12.46□□□□□ -0.41
TNFRSF1B-204ENST00000536782 RPL23P62829 140 aaKnown RBP12.46□□□□□ -0.41
TNFRSF1B-204ENST00000536782 SRSF3P84103 164 aaKnown RBP12.46□□□□□ -0.41
TNFRSF1B-204ENST00000536782 COX6A2Q02221 97 aa12.46□□□□□ -0.41
TNFRSF1B-204ENST00000536782 RNASEKQ6P5S7 137 aaKnown RBP12.46□□□□□ -0.41
TNFRSF1B-204ENST00000536782 CHCHD10Q8WYQ3 142 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1B-204ENST00000536782 RPL39LQ96EH5 51 aaKnown RBP12.46□□□□□ -0.41
TNFRSF1B-204ENST00000536782 HIGD1CA8MV81 97 aa12.45□□□□□ -0.42
TNFRSF1B-204ENST00000536782 APCSP02743 223 aa12.45□□□□□ -0.42
TNFRSF1B-204ENST00000536782 HIGD2BQ4VC39 106 aa12.45□□□□□ -0.42
TNFRSF1B-204ENST00000536782 C7orf33Q8WU49 177 aa12.45□□□□□ -0.42
TNFRSF1B-204ENST00000536782 V9GYV3 84 aa12.45□□□□□ -0.42
TNFRSF1B-204ENST00000536782 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF1B-204ENST00000536782 IGKV2-29A2NJV5 120 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF1B-204ENST00000536782 A0A1B0GUT8 65 aa12.43□□□□□ -0.42
TNFRSF1B-204ENST00000536782 SDHAF1A6NFY7 115 aa12.43□□□□□ -0.42
TNFRSF1B-204ENST00000536782 PHOX2AO14813 284 aa12.43□□□□□ -0.42
TNFRSF1B-204ENST00000536782 FGF6P10767 208 aa12.43□□□□□ -0.42
TNFRSF1B-204ENST00000536782 RAB14P61106 215 aa12.43□□□□□ -0.42
TNFRSF1B-204ENST00000536782 ADIRFQ15847 76 aa12.43□□□□□ -0.42
TNFRSF1B-204ENST00000536782 TNXBP22105 4242 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms