RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SMKR1H3BMG3 65 aa3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 VCYO14598 125 aa3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 ZNF25P17030 456 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 ADCYAP1P18509 176 aa3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 SUMO2P61956 95 aaKnown RBP3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 RBX1P62877 108 aa3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 MIAQ16674 131 aa3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 MRPL51Q4U2R6 128 aaKnown RBP3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 CDPF1Q6NVV7 123 aa3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 RNASEKQ6P5S7 137 aaKnown RBP3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 ATRAIDQ6UW56 229 aa3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 Q6ZRN7 208 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 NTM-AS1Q6ZSK4 140 aa3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 SPATA12Q7Z6I5 190 aa3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 ORMDL3Q8N138 153 aa3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 Q8N3U1 123 aa3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 Q8N976 141 aa3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 TMEM18Q96B42 140 aa3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 C20orf78Q9BR46 151 aa3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 TMEM70Q9BUB7 260 aa3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 TMEM242Q9NWH2 141 aa3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 CARHSP1Q9Y2V2 147 aaKnown RBP3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 LYSTQ99698 3801 aa3.63□□□□□ -1.83
HMGB1P40-201ENST00000525121 A0A087WTM6 91 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 TRBV27A0A0K0K1C4 114 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 A0A1B0GUV1 79 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 C7orf77A4D0Y5 90 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 D6R8Y8 96 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 PHOX2AO14813 284 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 SNAPINO95295 136 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 TNFRSF6BO95407 300 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 RAB5AP20339 215 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 RPS10P46783 165 aaKnown RBP3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 REG3AQ06141 175 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 COX19Q49B96 90 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 C14orf177Q52M58 125 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 DGAT2L7PQ6IED9 249 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 CLPSL2Q6UWE3 100 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 LINC00269Q8N2A0 174 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 SVBPQ8N300 66 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 NRACQ8N912 160 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 CLRN3Q8NCR9 226 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 OR5A1Q8NGJ0 315 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 DEFB104AQ8WTQ1 72 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 NTN5Q8WTR8 489 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 PRELID3AQ96N28 172 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 MAP1LC3AQ9H492 121 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 RPS10P5Q9NQ39 176 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 PGPEP1Q9NXJ5 209 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 LAMTOR2Q9Y2Q5 125 aa3.62□□□□□ -1.83
HMGB1P40-201ENST00000525121 TRBV24-1A0A075B6N3 115 aa3.61□□□□□ -1.83
HMGB1P40-201ENST00000525121 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P40-201ENST00000525121 TRAV8-4A0A0B4J246 113 aa3.61□□□□□ -1.83
HMGB1P40-201ENST00000525121 IGKV2-29A2NJV5 120 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P40-201ENST00000525121 TSHBP01222 138 aa3.61□□□□□ -1.83
HMGB1P40-201ENST00000525121 HLA-DQA1P01909 254 aa3.61□□□□□ -1.83
HMGB1P40-201ENST00000525121 APOC3P02656 99 aa3.61□□□□□ -1.83
HMGB1P40-201ENST00000525121 FGF6P10767 208 aa3.61□□□□□ -1.83
HMGB1P40-201ENST00000525121 POLR2KP53803 58 aaKnown RBP3.61□□□□□ -1.83
HMGB1P40-201ENST00000525121 RPL32P62910 135 aaKnown RBP3.61□□□□□ -1.83
HMGB1P40-201ENST00000525121 C10orf91Q5T1B1 145 aa3.61□□□□□ -1.83
HMGB1P40-201ENST00000525121 TMEM136Q6ZRR5 245 aa3.61□□□□□ -1.83
HMGB1P40-201ENST00000525121 SMIM2Q9BVW6 85 aa3.61□□□□□ -1.83
HMGB1P40-201ENST00000525121 PLECQ15149 4684 aaKnown RBP3.61□□□□□ -1.83
HMGB1P40-201ENST00000525121 DNAH1Q9P2D7 4330 aa3.61□□□□□ -1.83
HMGB1P40-201ENST00000525121 RYR2Q92736 4967 aa3.6□□□□□ -1.83
HMGB1P40-201ENST00000525121 IGLV4-60A0A075B6I1 120 aa3.6□□□□□ -1.83
HMGB1P40-201ENST00000525121 IGLV5-52A0A0A0MRZ9 124 aa3.6□□□□□ -1.83
HMGB1P40-201ENST00000525121 IGKV3OR2-268A0A0C4DH90 116 aa3.6□□□□□ -1.83
HMGB1P40-201ENST00000525121 LECT2O14960 151 aa3.6□□□□□ -1.83
HMGB1P40-201ENST00000525121 GAS8-AS1O95177 125 aa3.6□□□□□ -1.83
HMGB1P40-201ENST00000525121 NPYP01303 97 aa3.6□□□□□ -1.83
HMGB1P40-201ENST00000525121 MT-ND6P03923 174 aa3.6□□□□□ -1.83
HMGB1P40-201ENST00000525121 ENHOQ6UWT2 76 aa3.6□□□□□ -1.83
HMGB1P40-201ENST00000525121 Q8N814 137 aa3.6□□□□□ -1.83
HMGB1P40-201ENST00000525121 C20orf203Q8NBC4 194 aa3.6□□□□□ -1.83
HMGB1P40-201ENST00000525121 PRR34Q9NV39 138 aa3.6□□□□□ -1.83
HMGB1P40-201ENST00000525121 SACSQ9NZJ4 4579 aa3.6□□□□□ -1.83
HMGB1P40-201ENST00000525121 RYR3Q15413 4870 aa3.59□□□□□ -1.83
HMGB1P40-201ENST00000525121 IGLV10-54A0A075B6I4 117 aa3.59□□□□□ -1.83
HMGB1P40-201ENST00000525121 LOC389332A0A1B0GUA5 103 aa3.59□□□□□ -1.83
HMGB1P40-201ENST00000525121 LRCOL1A6NCL2 159 aa3.59□□□□□ -1.83
HMGB1P40-201ENST00000525121 ESDP10768 282 aa3.59□□□□□ -1.83
HMGB1P40-201ENST00000525121 G0S2P27469 103 aa3.59□□□□□ -1.83
HMGB1P40-201ENST00000525121 SS18Q15532 418 aa3.59□□□□□ -1.83
HMGB1P40-201ENST00000525121 CFAP161Q6P656 301 aa3.59□□□□□ -1.83
HMGB1P40-201ENST00000525121 MRPL52Q86TS9 123 aaKnown RBP3.59□□□□□ -1.83
HMGB1P40-201ENST00000525121 BAALCQ8WXS3 180 aa3.59□□□□□ -1.83
HMGB1P40-201ENST00000525121 GNB1LQ9BYB4 327 aa3.59□□□□□ -1.83
HMGB1P40-201ENST00000525121 NXT2Q9NPJ8 142 aaKnown RBP3.59□□□□□ -1.83
HMGB1P40-201ENST00000525121 SPANXA1Q9NS26 97 aa3.59□□□□□ -1.83
HMGB1P40-201ENST00000525121 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P40-201ENST00000525121 USP17L23D6RBM5 183 aa3.58□□□□□ -1.84
HMGB1P40-201ENST00000525121 K7EMI3 77 aa3.58□□□□□ -1.84
HMGB1P40-201ENST00000525121 GCSHP23434 173 aa3.58□□□□□ -1.84
HMGB1P40-201ENST00000525121 IFI27P40305 119 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P40-201ENST00000525121 KRTAP10-2P60368 255 aa3.58□□□□□ -1.84
HMGB1P40-201ENST00000525121 ORMDL2Q53FV1 153 aa3.58□□□□□ -1.84
HMGB1P40-201ENST00000525121 Q6ZN92 141 aa3.58□□□□□ -1.84
HMGB1P40-201ENST00000525121 ZNF664Q8N3J9 261 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms