RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 ST20Q9HBF5 79 aa10.12□□□□□ -0.79
SF3B2-202ENST00000524475 TMEM242Q9NWH2 141 aa10.12□□□□□ -0.79
SF3B2-202ENST00000524475 COX11Q9Y6N1 276 aa10.12□□□□□ -0.79
SF3B2-202ENST00000524475 LRP1BQ9NZR2 4599 aa10.12□□□□□ -0.79
SF3B2-202ENST00000524475 A0A1B0GUV1 79 aa10.11□□□□□ -0.79
SF3B2-202ENST00000524475 TMEM262E9PQX1 116 aa10.11□□□□□ -0.79
SF3B2-202ENST00000524475 I3L3M4 83 aa10.11□□□□□ -0.79
SF3B2-202ENST00000524475 GAS8-AS1O95177 125 aa10.11□□□□□ -0.79
SF3B2-202ENST00000524475 RPS10P46783 165 aaKnown RBP10.11□□□□□ -0.79
SF3B2-202ENST00000524475 Q0VG73 95 aa10.11□□□□□ -0.79
SF3B2-202ENST00000524475 ATRAIDQ6UW56 229 aa10.11□□□□□ -0.79
SF3B2-202ENST00000524475 BTF3L4Q96K17 158 aa10.11□□□□□ -0.79
SF3B2-202ENST00000524475 TRBV24-1A0A075B6N3 115 aa10.1□□□□□ -0.79
SF3B2-202ENST00000524475 TRAV9-1A0A075B6T8 112 aa10.1□□□□□ -0.79
SF3B2-202ENST00000524475 H7C423 109 aa10.1□□□□□ -0.79
SF3B2-202ENST00000524475 PPBPP02775 128 aa10.1□□□□□ -0.79
SF3B2-202ENST00000524475 AMTP48728 403 aa10.1□□□□□ -0.79
SF3B2-202ENST00000524475 RBX1P62877 108 aa10.1□□□□□ -0.79
SF3B2-202ENST00000524475 RPL32P62910 135 aaKnown RBP10.1□□□□□ -0.79
SF3B2-202ENST00000524475 RMI2Q96E14 147 aa10.1□□□□□ -0.79
SF3B2-202ENST00000524475 KLK12Q9UKR0 248 aa10.1□□□□□ -0.79
SF3B2-202ENST00000524475 PHOX2AO14813 284 aa10.09□□□□□ -0.79
SF3B2-202ENST00000524475 SUMO2P61956 95 aaKnown RBP10.09□□□□□ -0.79
SF3B2-202ENST00000524475 GAGE6Q13070 117 aa10.09□□□□□ -0.79
SF3B2-202ENST00000524475 RHEBQ15382 184 aa10.09□□□□□ -0.79
SF3B2-202ENST00000524475 C20orf78Q9BR46 151 aa10.09□□□□□ -0.79
SF3B2-202ENST00000524475 Q9HAA7 133 aa10.09□□□□□ -0.79
SF3B2-202ENST00000524475 PRR34Q9NV39 138 aa10.09□□□□□ -0.79
SF3B2-202ENST00000524475 A0A087WTM6 91 aa10.08□□□□□ -0.8
SF3B2-202ENST00000524475 SMKR1H3BMG3 65 aa10.08□□□□□ -0.8
SF3B2-202ENST00000524475 EREGO14944 169 aa10.08□□□□□ -0.8
SF3B2-202ENST00000524475 APCSP02743 223 aa10.08□□□□□ -0.8
SF3B2-202ENST00000524475 PMCHP20382 165 aa10.08□□□□□ -0.8
SF3B2-202ENST00000524475 CKS2P33552 79 aa10.08□□□□□ -0.8
SF3B2-202ENST00000524475 VCYO14598 125 aa10.07□□□□□ -0.8
SF3B2-202ENST00000524475 UBE2L6O14933 153 aa10.07□□□□□ -0.8
SF3B2-202ENST00000524475 PSCAO43653 123 aa10.07□□□□□ -0.8
SF3B2-202ENST00000524475 TSHBP01222 138 aa10.07□□□□□ -0.8
SF3B2-202ENST00000524475 ANGP03950 147 aaKnown RBP10.07□□□□□ -0.8
SF3B2-202ENST00000524475 ESDP10768 282 aa10.07□□□□□ -0.8
SF3B2-202ENST00000524475 MIAQ16674 131 aa10.07□□□□□ -0.8
SF3B2-202ENST00000524475 Q8N976 141 aa10.07□□□□□ -0.8
SF3B2-202ENST00000524475 CLRN3Q8NCR9 226 aa10.07□□□□□ -0.8
SF3B2-202ENST00000524475 UBE2WQ96B02 151 aa10.07□□□□□ -0.8
SF3B2-202ENST00000524475 C7orf77A4D0Y5 90 aa10.06□□□□□ -0.8
SF3B2-202ENST00000524475 LRCOL1A6NCL2 159 aa10.06□□□□□ -0.8
SF3B2-202ENST00000524475 CRPP02741 224 aa10.06□□□□□ -0.8
SF3B2-202ENST00000524475 ENHOQ6UWT2 76 aa10.06□□□□□ -0.8
SF3B2-202ENST00000524475 ORMDL3Q8N138 153 aa10.06□□□□□ -0.8
SF3B2-202ENST00000524475 D6R8Y8 96 aa10.05□□□□□ -0.8
SF3B2-202ENST00000524475 TCAPO15273 167 aa10.05□□□□□ -0.8
SF3B2-202ENST00000524475 TNFRSF6BO95407 300 aa10.05□□□□□ -0.8
SF3B2-202ENST00000524475 ZNF25P17030 456 aaPredicted RBP10.05□□□□□ -0.8
SF3B2-202ENST00000524475 C20orf203Q8NBC4 194 aa10.05□□□□□ -0.8
SF3B2-202ENST00000524475 LAMTOR2Q9Y2Q5 125 aa10.05□□□□□ -0.8
SF3B2-202ENST00000524475 S100PP25815 95 aa10.04□□□□□ -0.8
SF3B2-202ENST00000524475 NDUFA5Q16718 116 aa10.04□□□□□ -0.8
SF3B2-202ENST00000524475 CDPF1Q6NVV7 123 aa10.04□□□□□ -0.8
SF3B2-202ENST00000524475 SPATA12Q7Z6I5 190 aa10.04□□□□□ -0.8
SF3B2-202ENST00000524475 KIR2DL4Q99706 377 aa10.04□□□□□ -0.8
SF3B2-202ENST00000524475 IGLV4-60A0A075B6I1 120 aa10.03□□□□□ -0.8
SF3B2-202ENST00000524475 PRSS47A8MTI9 375 aa10.03□□□□□ -0.8
SF3B2-202ENST00000524475 TMEM136Q6ZRR5 245 aa10.03□□□□□ -0.8
SF3B2-202ENST00000524475 LINC00269Q8N2A0 174 aa10.03□□□□□ -0.8
SF3B2-202ENST00000524475 SVBPQ8N300 66 aa10.03□□□□□ -0.8
SF3B2-202ENST00000524475 C1orf43Q9BWL3 253 aa10.03□□□□□ -0.8
SF3B2-202ENST00000524475 PGPEP1Q9NXJ5 209 aa10.03□□□□□ -0.8
SF3B2-202ENST00000524475 KIAA1109Q2LD37 5005 aa10.02□□□□□ -0.81
SF3B2-202ENST00000524475 IGKV2D-24A0A075B6R9 120 aa10.02□□□□□ -0.81
SF3B2-202ENST00000524475 TRAV8-4A0A0B4J246 113 aa10.02□□□□□ -0.81
SF3B2-202ENST00000524475 NPYP01303 97 aa10.02□□□□□ -0.81
SF3B2-202ENST00000524475 KRTAP10-2P60368 255 aa10.02□□□□□ -0.81
SF3B2-202ENST00000524475 MRPL52Q86TS9 123 aaKnown RBP10.02□□□□□ -0.81
SF3B2-202ENST00000524475 DEFB104AQ8WTQ1 72 aa10.02□□□□□ -0.81
SF3B2-202ENST00000524475 SMIM2Q9BVW6 85 aa10.02□□□□□ -0.81
SF3B2-202ENST00000524475 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.01□□□□□ -0.81
SF3B2-202ENST00000524475 IGKV2-29A2NJV5 120 aaPredicted RBP10.01□□□□□ -0.81
SF3B2-202ENST00000524475 SNAPINO95295 136 aa10.01□□□□□ -0.81
SF3B2-202ENST00000524475 FGF6P10767 208 aa10.01□□□□□ -0.81
SF3B2-202ENST00000524475 FCER1GP30273 86 aa10.01□□□□□ -0.81
SF3B2-202ENST00000524475 REG3AQ06141 175 aa10.01□□□□□ -0.81
SF3B2-202ENST00000524475 SMAGPQ0VAQ4 97 aa10.01□□□□□ -0.81
SF3B2-202ENST00000524475 COX19Q49B96 90 aa10.01□□□□□ -0.81
SF3B2-202ENST00000524475 MAPKAPK5-AS1Q8N8E1 139 aa10.01□□□□□ -0.81
SF3B2-202ENST00000524475 NTN5Q8WTR8 489 aaPredicted RBP10.01□□□□□ -0.81
SF3B2-202ENST00000524475 PRELID3AQ96N28 172 aa10.01□□□□□ -0.81
SF3B2-202ENST00000524475 RPS10P5Q9NQ39 176 aa10.01□□□□□ -0.81
SF3B2-202ENST00000524475 APOBP04114 4563 aaKnown RBP10□□□□□ -0.81
SF3B2-202ENST00000524475 C16orf90A8MZG2 172 aa10□□□□□ -0.81
SF3B2-202ENST00000524475 HLA-DQA1P01909 254 aa10□□□□□ -0.81
SF3B2-202ENST00000524475 APOC3P02656 99 aa10□□□□□ -0.81
SF3B2-202ENST00000524475 AMMECR1LQ6DCA0 310 aa10□□□□□ -0.81
SF3B2-202ENST00000524475 Q8N814 137 aa10□□□□□ -0.81
SF3B2-202ENST00000524475 GNB1LQ9BYB4 327 aa10□□□□□ -0.81
SF3B2-202ENST00000524475 CSDC2Q9Y534 153 aaKnown RBP10□□□□□ -0.81
SF3B2-202ENST00000524475 RYR1P21817 5038 aa10□□□□□ -0.81
SF3B2-202ENST00000524475 KRTAP26-1Q6PEX3 210 aa9.99□□□□□ -0.81
SF3B2-202ENST00000524475 HERC2O95714 4834 aa9.99□□□□□ -0.81
SF3B2-202ENST00000524475 RNASEKQ6P5S7 137 aaKnown RBP9.98□□□□□ -0.81
SF3B2-202ENST00000524475 TMEM18Q96B42 140 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms