RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 C8orf87E5RJ46 101 aa3.46□□□□□ -1.86
HMGB1P19-201ENST00000517578 NDUFB1O75438 58 aa3.46□□□□□ -1.86
HMGB1P19-201ENST00000517578 GAS8-AS1O95177 125 aa3.46□□□□□ -1.86
HMGB1P19-201ENST00000517578 TSHBP01222 138 aa3.46□□□□□ -1.86
HMGB1P19-201ENST00000517578 IGKV2D-40P01614 121 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P19-201ENST00000517578 TRGV3P03979 118 aa3.46□□□□□ -1.86
HMGB1P19-201ENST00000517578 MGPP08493 103 aa3.46□□□□□ -1.86
HMGB1P19-201ENST00000517578 RUSC1-AS1Q66K80 236 aa3.46□□□□□ -1.86
HMGB1P19-201ENST00000517578 C9orf47Q6ZRZ4 202 aa3.46□□□□□ -1.86
HMGB1P19-201ENST00000517578 C17orf82Q86X59 251 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P19-201ENST00000517578 GPHB5Q86YW7 130 aa3.46□□□□□ -1.86
HMGB1P19-201ENST00000517578 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P19-201ENST00000517578 NKAPP1Q8N9T2 125 aa3.46□□□□□ -1.86
HMGB1P19-201ENST00000517578 CCL4L1Q8NHW4 92 aa3.46□□□□□ -1.86
HMGB1P19-201ENST00000517578 LINC01560Q8TB33 94 aa3.46□□□□□ -1.86
HMGB1P19-201ENST00000517578 DIRC1Q969H9 104 aa3.46□□□□□ -1.86
HMGB1P19-201ENST00000517578 RMI2Q96E14 147 aa3.46□□□□□ -1.86
HMGB1P19-201ENST00000517578 SMAD5-AS1Q9Y6J3 95 aa3.46□□□□□ -1.86
HMGB1P19-201ENST00000517578 KNTC1P50748 2209 aa3.46□□□□□ -1.86
HMGB1P19-201ENST00000517578 RTTNQ86VV8 2226 aa3.46□□□□□ -1.86
HMGB1P19-201ENST00000517578 DSCAMO60469 2012 aa3.45□□□□□ -1.86
HMGB1P19-201ENST00000517578 hDV103S1A0JD37 113 aa3.45□□□□□ -1.86
HMGB1P19-201ENST00000517578 I3L2K1 104 aa3.45□□□□□ -1.86
HMGB1P19-201ENST00000517578 IGKV1-17P01599 117 aa3.45□□□□□ -1.86
HMGB1P19-201ENST00000517578 IGLV3-19P01714 112 aa3.45□□□□□ -1.86
HMGB1P19-201ENST00000517578 IGKV1-16P04430 117 aa3.45□□□□□ -1.86
HMGB1P19-201ENST00000517578 C17orf58Q2M2W7 97 aa3.45□□□□□ -1.86
HMGB1P19-201ENST00000517578 C15orf32Q32M92 178 aa3.45□□□□□ -1.86
HMGB1P19-201ENST00000517578 ASB16-AS1Q495Z4 193 aa3.45□□□□□ -1.86
HMGB1P19-201ENST00000517578 SOSTDC1Q6X4U4 206 aa3.45□□□□□ -1.86
HMGB1P19-201ENST00000517578 LINC00269Q8N2A0 174 aa3.45□□□□□ -1.86
HMGB1P19-201ENST00000517578 C20orf203Q8NBC4 194 aa3.45□□□□□ -1.86
HMGB1P19-201ENST00000517578 C11orf45Q8TAV5 145 aa3.45□□□□□ -1.86
HMGB1P19-201ENST00000517578 SNURFQ9Y675 71 aa3.45□□□□□ -1.86
HMGB1P19-201ENST00000517578 RP1P56715 2156 aa3.45□□□□□ -1.86
HMGB1P19-201ENST00000517578 LOC100131303A0A0U1RQF7 123 aa3.44□□□□□ -1.86
HMGB1P19-201ENST00000517578 SPTY2D1-AS1A0A0U1RR47 76 aa3.44□□□□□ -1.86
HMGB1P19-201ENST00000517578 NREPQ16612 68 aa3.44□□□□□ -1.86
HMGB1P19-201ENST00000517578 HCP5Q6MZN7 132 aa3.44□□□□□ -1.86
HMGB1P19-201ENST00000517578 Q6ZTC4 211 aa3.44□□□□□ -1.86
HMGB1P19-201ENST00000517578 BPESC1Q9GZL8 116 aa3.44□□□□□ -1.86
HMGB1P19-201ENST00000517578 C22orf24Q9Y442 160 aa3.44□□□□□ -1.86
HMGB1P19-201ENST00000517578 NOTCH4Q99466 2003 aa3.44□□□□□ -1.86
HMGB1P19-201ENST00000517578 LTBP2Q14767 1821 aa3.44□□□□□ -1.86
HMGB1P19-201ENST00000517578 IGKV1D-17A0A075B6S4 117 aa3.43□□□□□ -1.86
HMGB1P19-201ENST00000517578 LOC110117498A0A087WWA1 95 aa3.43□□□□□ -1.86
HMGB1P19-201ENST00000517578 TRBV6-8A0A0A6YYG3 113 aa3.43□□□□□ -1.86
HMGB1P19-201ENST00000517578 A0A0J9YXV3 536 aa3.43□□□□□ -1.86
HMGB1P19-201ENST00000517578 BUB1B-PAK6H3BSN5 160 aa3.43□□□□□ -1.86
HMGB1P19-201ENST00000517578 IGLV2-23P01705 113 aa3.43□□□□□ -1.86
HMGB1P19-201ENST00000517578 B3GALT5-AS1P59052 145 aa3.43□□□□□ -1.86
HMGB1P19-201ENST00000517578 ELOF1P60002 83 aaKnown RBP3.43□□□□□ -1.86
HMGB1P19-201ENST00000517578 UNQ9165/PRO28630Q6UXU0 137 aa3.43□□□□□ -1.86
HMGB1P19-201ENST00000517578 RPL39LQ96EH5 51 aaKnown RBP3.43□□□□□ -1.86
HMGB1P19-201ENST00000517578 FREM1Q5H8C1 2179 aa3.43□□□□□ -1.86
HMGB1P19-201ENST00000517578 DSCAML1Q8TD84 2053 aa3.42□□□□□ -1.86
HMGB1P19-201ENST00000517578 IGLV4-3A0A075B6K6 122 aa3.42□□□□□ -1.86
HMGB1P19-201ENST00000517578 TRAV22A0A0B4J277 110 aa3.42□□□□□ -1.86
HMGB1P19-201ENST00000517578 BPY2O14599 106 aa3.42□□□□□ -1.86
HMGB1P19-201ENST00000517578 LHBP01229 141 aa3.42□□□□□ -1.86
HMGB1P19-201ENST00000517578 IGHV3-48P01763 117 aa3.42□□□□□ -1.86
HMGB1P19-201ENST00000517578 IGKV2-30P06310 120 aa3.42□□□□□ -1.86
HMGB1P19-201ENST00000517578 CCL4P13236 92 aa3.42□□□□□ -1.86
HMGB1P19-201ENST00000517578 LINC01547P58512 204 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P19-201ENST00000517578 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P19-201ENST00000517578 SYCNQ0VAF6 134 aa3.42□□□□□ -1.86
HMGB1P19-201ENST00000517578 CLEC19AQ6UXS0 136 aa3.42□□□□□ -1.86
HMGB1P19-201ENST00000517578 FAM19A3Q7Z5A8 133 aa3.42□□□□□ -1.86
HMGB1P19-201ENST00000517578 Q8TAT8 98 aa3.42□□□□□ -1.86
HMGB1P19-201ENST00000517578 PATE1Q8WXA2 126 aa3.42□□□□□ -1.86
HMGB1P19-201ENST00000517578 ZNF625Q96I27 306 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P19-201ENST00000517578 LINC00167Q96N53 147 aa3.42□□□□□ -1.86
HMGB1P19-201ENST00000517578 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
HMGB1P19-201ENST00000517578 ZGRF1Q86YA3 2104 aa3.41□□□□□ -1.86
HMGB1P19-201ENST00000517578 IGLV5-45A0A087WSX0 123 aa3.41□□□□□ -1.86
HMGB1P19-201ENST00000517578 A0A087WZ39 114 aa3.41□□□□□ -1.86
HMGB1P19-201ENST00000517578 IGHV3-20A0A0C4DH32 117 aa3.41□□□□□ -1.86
HMGB1P19-201ENST00000517578 EPOPA6NHQ4 379 aa3.41□□□□□ -1.86
HMGB1P19-201ENST00000517578 A8MUN3 132 aa3.41□□□□□ -1.86
HMGB1P19-201ENST00000517578 RPL39P62891 51 aaKnown RBP3.41□□□□□ -1.86
HMGB1P19-201ENST00000517578 HAMPP81172 84 aa3.41□□□□□ -1.86
HMGB1P19-201ENST00000517578 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P19-201ENST00000517578 MIR7-3HGQ8N6C7 128 aa3.41□□□□□ -1.86
HMGB1P19-201ENST00000517578 SPATA3Q8NHX4 192 aa3.41□□□□□ -1.86
HMGB1P19-201ENST00000517578 Q9HAA7 133 aa3.41□□□□□ -1.86
HMGB1P19-201ENST00000517578 KIF25-AS1Q9Y6Z4 181 aa3.41□□□□□ -1.86
HMGB1P19-201ENST00000517578 IGHV3-64A0A075B6Q5 118 aa3.4□□□□□ -1.87
HMGB1P19-201ENST00000517578 K7EIM0 57 aa3.4□□□□□ -1.87
HMGB1P19-201ENST00000517578 NCR3O14931 201 aa3.4□□□□□ -1.87
HMGB1P19-201ENST00000517578 CTSGP08311 255 aa3.4□□□□□ -1.87
HMGB1P19-201ENST00000517578 GNLYP22749 145 aa3.4□□□□□ -1.87
HMGB1P19-201ENST00000517578 MP68P56378 58 aa3.4□□□□□ -1.87
HMGB1P19-201ENST00000517578 KRTAP10-6P60371 365 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P19-201ENST00000517578 RPL36AP83881 106 aaKnown RBP3.4□□□□□ -1.87
HMGB1P19-201ENST00000517578 KIAA0087Q14695 138 aa3.4□□□□□ -1.87
HMGB1P19-201ENST00000517578 CCL14Q16627 93 aa3.4□□□□□ -1.87
HMGB1P19-201ENST00000517578 FAM74A4Q5TZK3 123 aa3.4□□□□□ -1.87
HMGB1P19-201ENST00000517578 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
HMGB1P19-201ENST00000517578 Q6ZRP5 223 aa3.4□□□□□ -1.87
HMGB1P19-201ENST00000517578 PRR26Q8N8Z3 221 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms