RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 XKRY2A2RUG3 117 aa7.03□□□□□ -1.28
RNF4-212ENST00000509258 TEX46H3BTG2 121 aa7.03□□□□□ -1.28
RNF4-212ENST00000509258 GAS8-AS1O95177 125 aa7.03□□□□□ -1.28
RNF4-212ENST00000509258 RASL11AQ6T310 242 aa7.03□□□□□ -1.28
RNF4-212ENST00000509258 GATD1Q8NB37 220 aa7.03□□□□□ -1.28
RNF4-212ENST00000509258 RPL39LQ96EH5 51 aaKnown RBP7.03□□□□□ -1.28
RNF4-212ENST00000509258 CNFNQ9BYD5 112 aa7.03□□□□□ -1.28
RNF4-212ENST00000509258 DPH3P1Q9H4G8 78 aa7.03□□□□□ -1.28
RNF4-212ENST00000509258 RPP21Q9H633 154 aaKnown RBP7.03□□□□□ -1.28
RNF4-212ENST00000509258 PLA2G2DQ9UNK4 145 aa7.03□□□□□ -1.28
RNF4-212ENST00000509258 A0A1B0GVG6 124 aa7.02□□□□□ -1.29
RNF4-212ENST00000509258 F2Z2F3 143 aa7.02□□□□□ -1.29
RNF4-212ENST00000509258 AKAP14Q86UN6 197 aa7.02□□□□□ -1.29
RNF4-212ENST00000509258 C9orf163Q8N9P6 203 aa7.02□□□□□ -1.29
RNF4-212ENST00000509258 LYPD6BQ8NI32 183 aa7.02□□□□□ -1.29
RNF4-212ENST00000509258 AP5S1Q9NUS5 200 aa7.02□□□□□ -1.29
RNF4-212ENST00000509258 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.01□□□□□ -1.29
RNF4-212ENST00000509258 TRAV8-4A0A0B4J246 113 aa7.01□□□□□ -1.29
RNF4-212ENST00000509258 SLPIP03973 132 aa7.01□□□□□ -1.29
RNF4-212ENST00000509258 TRGC1P0CF51 173 aa7.01□□□□□ -1.29
RNF4-212ENST00000509258 REG3AQ06141 175 aa7.01□□□□□ -1.29
RNF4-212ENST00000509258 TWIST1Q15672 202 aa7.01□□□□□ -1.29
RNF4-212ENST00000509258 WDR73Q6P4I2 378 aa7.01□□□□□ -1.29
RNF4-212ENST00000509258 TMEM243Q9BU79 118 aa7.01□□□□□ -1.29
RNF4-212ENST00000509258 NIT2Q9NQR4 276 aa7.01□□□□□ -1.29
RNF4-212ENST00000509258 BIN3Q9NQY0 253 aa7.01□□□□□ -1.29
RNF4-212ENST00000509258 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.01□□□□□ -1.29
RNF4-212ENST00000509258 UBE2L6O14933 153 aa7□□□□□ -1.29
RNF4-212ENST00000509258 HNRNPA3P51991 378 aaKnown RBP7□□□□□ -1.29
RNF4-212ENST00000509258 PGLYRP4Q96LB8 373 aa7□□□□□ -1.29
RNF4-212ENST00000509258 A0A1B0GUV1 79 aa6.98□□□□□ -1.29
RNF4-212ENST00000509258 hDV102S1A0JD36 115 aa6.98□□□□□ -1.29
RNF4-212ENST00000509258 TMEM250H0YL14 139 aa6.98□□□□□ -1.29
RNF4-212ENST00000509258 GATCO43716 136 aaKnown RBP6.98□□□□□ -1.29
RNF4-212ENST00000509258 TAGLN2P37802 199 aaKnown RBP6.98□□□□□ -1.29
RNF4-212ENST00000509258 AMTP48728 403 aa6.98□□□□□ -1.29
RNF4-212ENST00000509258 CEBPGP53567 150 aa6.98□□□□□ -1.29
RNF4-212ENST00000509258 DPH3Q96FX2 82 aa6.98□□□□□ -1.29
RNF4-212ENST00000509258 IGHV3-64A0A075B6Q5 118 aa6.97□□□□□ -1.29
RNF4-212ENST00000509258 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.97□□□□□ -1.29
RNF4-212ENST00000509258 IGKV2-29A2NJV5 120 aaPredicted RBP6.97□□□□□ -1.29
RNF4-212ENST00000509258 FAM231BA6NCW3 169 aa6.97□□□□□ -1.29
RNF4-212ENST00000509258 CNBPP62633 177 aaKnown RBP6.97□□□□□ -1.29
RNF4-212ENST00000509258 BLOC1S1P78537 153 aa6.97□□□□□ -1.29
RNF4-212ENST00000509258 COTL1Q14019 142 aa6.97□□□□□ -1.29
RNF4-212ENST00000509258 CFAP161Q6P656 301 aa6.97□□□□□ -1.29
RNF4-212ENST00000509258 SDIM1Q6ZPB5 146 aa6.97□□□□□ -1.29
RNF4-212ENST00000509258 FAM231DQ6ZW35 169 aa6.97□□□□□ -1.29
RNF4-212ENST00000509258 C15orf56Q8N910 161 aa6.97□□□□□ -1.29
RNF4-212ENST00000509258 RNF185Q96GF1 192 aa6.97□□□□□ -1.29
RNF4-212ENST00000509258 C9JQL5 133 aa6.96□□□□□ -1.3
RNF4-212ENST00000509258 SRP19P09132 144 aaKnown RBP6.96□□□□□ -1.3
RNF4-212ENST00000509258 CHTF8P0CG12 524 aa6.96□□□□□ -1.3
RNF4-212ENST00000509258 RPS10P46783 165 aaKnown RBP6.96□□□□□ -1.3
RNF4-212ENST00000509258 LINC01551Q86U37 167 aa6.96□□□□□ -1.3
RNF4-212ENST00000509258 IGKV3OR2-268A0A0C4DH90 116 aa6.95□□□□□ -1.3
RNF4-212ENST00000509258 GAGE12HA6NDE8 117 aa6.95□□□□□ -1.3
RNF4-212ENST00000509258 Q6ZRU5 148 aa6.95□□□□□ -1.3
RNF4-212ENST00000509258 SMIM15Q7Z3B0 74 aa6.95□□□□□ -1.3
RNF4-212ENST00000509258 FAM210AQ96ND0 272 aa6.95□□□□□ -1.3
RNF4-212ENST00000509258 SDHAF1A6NFY7 115 aa6.94□□□□□ -1.3
RNF4-212ENST00000509258 TSHBP01222 138 aa6.94□□□□□ -1.3
RNF4-212ENST00000509258 SRSF3P84103 164 aaKnown RBP6.94□□□□□ -1.3
RNF4-212ENST00000509258 C7orf33Q8WU49 177 aa6.94□□□□□ -1.3
RNF4-212ENST00000509258 SMIM7Q9BQ49 75 aa6.94□□□□□ -1.3
RNF4-212ENST00000509258 PKIGQ9Y2B9 76 aa6.94□□□□□ -1.3
RNF4-212ENST00000509258 HIGD1CA8MV81 97 aa6.93□□□□□ -1.3
RNF4-212ENST00000509258 A8MWL6 223 aa6.93□□□□□ -1.3
RNF4-212ENST00000509258 SMKR1H3BMG3 65 aa6.93□□□□□ -1.3
RNF4-212ENST00000509258 CIRBPQ14011 172 aaKnown RBP6.93□□□□□ -1.3
RNF4-212ENST00000509258 CT83Q5H943 113 aa6.93□□□□□ -1.3
RNF4-212ENST00000509258 AMMECR1LQ6DCA0 310 aa6.93□□□□□ -1.3
RNF4-212ENST00000509258 EIF5A2Q9GZV4 153 aaKnown RBP6.93□□□□□ -1.3
RNF4-212ENST00000509258 TMEM242Q9NWH2 141 aa6.93□□□□□ -1.3
RNF4-212ENST00000509258 V9GYV3 84 aa6.93□□□□□ -1.3
RNF4-212ENST00000509258 TRBV6-5A0A0K0K1A5 114 aa6.92□□□□□ -1.3
RNF4-212ENST00000509258 ZNF727A8MUV8 499 aa6.92□□□□□ -1.3
RNF4-212ENST00000509258 NCR2O95944 276 aa6.92□□□□□ -1.3
RNF4-212ENST00000509258 FGF6P10767 208 aa6.92□□□□□ -1.3
RNF4-212ENST00000509258 ESDP10768 282 aa6.92□□□□□ -1.3
RNF4-212ENST00000509258 RAB4AP20338 218 aa6.92□□□□□ -1.3
RNF4-212ENST00000509258 HIGD2BQ4VC39 106 aa6.92□□□□□ -1.3
RNF4-212ENST00000509258 AMN1Q8IY45 258 aa6.92□□□□□ -1.3
RNF4-212ENST00000509258 TSKUQ8WUA8 353 aa6.92□□□□□ -1.3
RNF4-212ENST00000509258 CHCHD10Q8WYQ3 142 aaPredicted RBP6.92□□□□□ -1.3
RNF4-212ENST00000509258 OSTCQ9NRP0 149 aa6.92□□□□□ -1.3
RNF4-212ENST00000509258 A0A087WYN8 130 aa6.91□□□□□ -1.3
RNF4-212ENST00000509258 A0A1B0GUT8 65 aa6.91□□□□□ -1.3
RNF4-212ENST00000509258 H7C423 109 aa6.91□□□□□ -1.3
RNF4-212ENST00000509258 APCSP02743 223 aa6.91□□□□□ -1.3
RNF4-212ENST00000509258 MT1HL1P0DM35 61 aa6.91□□□□□ -1.3
RNF4-212ENST00000509258 POLR2KP53803 58 aaKnown RBP6.91□□□□□ -1.3
RNF4-212ENST00000509258 RPL23P62829 140 aaKnown RBP6.91□□□□□ -1.3
RNF4-212ENST00000509258 FOXI1Q12951 378 aa6.91□□□□□ -1.3
RNF4-212ENST00000509258 RNASEKQ6P5S7 137 aaKnown RBP6.91□□□□□ -1.3
RNF4-212ENST00000509258 TEX261Q6UWH6 196 aa6.91□□□□□ -1.3
RNF4-212ENST00000509258 NUP35Q8NFH5 326 aa6.91□□□□□ -1.3
RNF4-212ENST00000509258 ISOC2Q96AB3 205 aa6.91□□□□□ -1.3
RNF4-212ENST00000509258 TNXBP22105 4242 aa6.91□□□□□ -1.3
RNF4-212ENST00000509258 I3L3M4 83 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms