RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 EIF5AL1Q6IS14 154 aaKnown RBP8.44□□□□□ -1.06
DDX41-204ENST00000504807 GATD1Q8NB37 220 aa8.44□□□□□ -1.06
DDX41-204ENST00000504807 CNFNQ9BYD5 112 aa8.44□□□□□ -1.06
DDX41-204ENST00000504807 TNXBP22105 4242 aa8.44□□□□□ -1.06
DDX41-204ENST00000504807 GAS8-AS1O95177 125 aa8.43□□□□□ -1.06
DDX41-204ENST00000504807 REG3AQ06141 175 aa8.43□□□□□ -1.06
DDX41-204ENST00000504807 ALKAL2Q6UX46 152 aa8.43□□□□□ -1.06
DDX41-204ENST00000504807 RPL39LQ96EH5 51 aaKnown RBP8.43□□□□□ -1.06
DDX41-204ENST00000504807 DPH3P1Q9H4G8 78 aa8.43□□□□□ -1.06
DDX41-204ENST00000504807 RPP21Q9H633 154 aaKnown RBP8.43□□□□□ -1.06
DDX41-204ENST00000504807 F2Z2F3 143 aa8.42□□□□□ -1.06
DDX41-204ENST00000504807 TMEM97Q5BJF2 176 aa8.42□□□□□ -1.06
DDX41-204ENST00000504807 NIT2Q9NQR4 276 aa8.42□□□□□ -1.06
DDX41-204ENST00000504807 TEX46H3BTG2 121 aa8.41□□□□□ -1.06
DDX41-204ENST00000504807 TWIST1Q15672 202 aa8.41□□□□□ -1.06
DDX41-204ENST00000504807 SDIM1Q6ZPB5 146 aa8.41□□□□□ -1.06
DDX41-204ENST00000504807 C9orf163Q8N9P6 203 aa8.41□□□□□ -1.06
DDX41-204ENST00000504807 PGLYRP4Q96LB8 373 aa8.41□□□□□ -1.06
DDX41-204ENST00000504807 TMEM243Q9BU79 118 aa8.41□□□□□ -1.06
DDX41-204ENST00000504807 H7C1H1 209 aa8.4□□□□□ -1.06
DDX41-204ENST00000504807 TRGC1P0CF51 173 aa8.4□□□□□ -1.06
DDX41-204ENST00000504807 C14orf177Q52M58 125 aa8.4□□□□□ -1.06
DDX41-204ENST00000504807 WDR73Q6P4I2 378 aa8.4□□□□□ -1.06
DDX41-204ENST00000504807 LYPD6BQ8NI32 183 aa8.4□□□□□ -1.06
DDX41-204ENST00000504807 A0A1B0GUV1 79 aa8.39□□□□□ -1.07
DDX41-204ENST00000504807 XKRY2A2RUG3 117 aa8.39□□□□□ -1.07
DDX41-204ENST00000504807 PKIAP61925 76 aa8.39□□□□□ -1.07
DDX41-204ENST00000504807 AKAP14Q86UN6 197 aa8.39□□□□□ -1.07
DDX41-204ENST00000504807 C15orf56Q8N910 161 aa8.39□□□□□ -1.07
DDX41-204ENST00000504807 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.39□□□□□ -1.07
DDX41-204ENST00000504807 FAT4Q6V0I7 4981 aa8.38□□□□□ -1.07
DDX41-204ENST00000504807 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.38□□□□□ -1.07
DDX41-204ENST00000504807 IGKV2-29A2NJV5 120 aaPredicted RBP8.38□□□□□ -1.07
DDX41-204ENST00000504807 CHTF8P0CG12 524 aa8.38□□□□□ -1.07
DDX41-204ENST00000504807 MT1HL1P0DM35 61 aa8.38□□□□□ -1.07
DDX41-204ENST00000504807 AMTP48728 403 aa8.38□□□□□ -1.07
DDX41-204ENST00000504807 A0A1B0GVG6 124 aa8.37□□□□□ -1.07
DDX41-204ENST00000504807 DGAT2L7PQ6IED9 249 aa8.37□□□□□ -1.07
DDX41-204ENST00000504807 BIN3Q9NQY0 253 aa8.37□□□□□ -1.07
DDX41-204ENST00000504807 hDV102S1A0JD36 115 aa8.36□□□□□ -1.07
DDX41-204ENST00000504807 FAM231BA6NCW3 169 aa8.36□□□□□ -1.07
DDX41-204ENST00000504807 TMEM250H0YL14 139 aa8.36□□□□□ -1.07
DDX41-204ENST00000504807 CNBPP62633 177 aaKnown RBP8.36□□□□□ -1.07
DDX41-204ENST00000504807 CIRBPQ14011 172 aaKnown RBP8.36□□□□□ -1.07
DDX41-204ENST00000504807 COTL1Q14019 142 aa8.36□□□□□ -1.07
DDX41-204ENST00000504807 FAM231DQ6ZW35 169 aa8.36□□□□□ -1.07
DDX41-204ENST00000504807 IGKV3OR2-268A0A0C4DH90 116 aa8.35□□□□□ -1.07
DDX41-204ENST00000504807 GAGE12HA6NDE8 117 aa8.35□□□□□ -1.07
DDX41-204ENST00000504807 GATCO43716 136 aaKnown RBP8.35□□□□□ -1.07
DDX41-204ENST00000504807 TAGLN2P37802 199 aaKnown RBP8.35□□□□□ -1.07
DDX41-204ENST00000504807 RPS10P46783 165 aaKnown RBP8.35□□□□□ -1.07
DDX41-204ENST00000504807 CEBPGP53567 150 aa8.35□□□□□ -1.07
DDX41-204ENST00000504807 RPL37AP61513 92 aaKnown RBP8.35□□□□□ -1.07
DDX41-204ENST00000504807 RNF185Q96GF1 192 aa8.35□□□□□ -1.07
DDX41-204ENST00000504807 TRAV8-4A0A0B4J246 113 aa8.34□□□□□ -1.07
DDX41-204ENST00000504807 LINC01551Q86U37 167 aa8.34□□□□□ -1.07
DDX41-204ENST00000504807 SDHAF1A6NFY7 115 aa8.33□□□□□ -1.08
DDX41-204ENST00000504807 C9JQL5 133 aa8.33□□□□□ -1.08
DDX41-204ENST00000504807 UBE2L6O14933 153 aa8.33□□□□□ -1.08
DDX41-204ENST00000504807 TSHBP01222 138 aa8.33□□□□□ -1.08
DDX41-204ENST00000504807 SRP19P09132 144 aaKnown RBP8.33□□□□□ -1.08
DDX41-204ENST00000504807 BLOC1S1P78537 153 aa8.33□□□□□ -1.08
DDX41-204ENST00000504807 HIGD2BQ4VC39 106 aa8.33□□□□□ -1.08
DDX41-204ENST00000504807 CLRN3Q8NCR9 226 aa8.33□□□□□ -1.08
DDX41-204ENST00000504807 FGF6P10767 208 aa8.32□□□□□ -1.08
DDX41-204ENST00000504807 SPACA4Q8TDM5 124 aa8.32□□□□□ -1.08
DDX41-204ENST00000504807 CHCHD10Q8WYQ3 142 aaPredicted RBP8.32□□□□□ -1.08
DDX41-204ENST00000504807 TMEM242Q9NWH2 141 aa8.32□□□□□ -1.08
DDX41-204ENST00000504807 A0A087WYN8 130 aa8.31□□□□□ -1.08
DDX41-204ENST00000504807 TRBV6-5A0A0K0K1A5 114 aa8.31□□□□□ -1.08
DDX41-204ENST00000504807 SMKR1H3BMG3 65 aa8.31□□□□□ -1.08
DDX41-204ENST00000504807 ESDP10768 282 aa8.31□□□□□ -1.08
DDX41-204ENST00000504807 FOXI1Q12951 378 aa8.31□□□□□ -1.08
DDX41-204ENST00000504807 CT83Q5H943 113 aa8.31□□□□□ -1.08
DDX41-204ENST00000504807 FAM210AQ96ND0 272 aa8.31□□□□□ -1.08
DDX41-204ENST00000504807 SMIM7Q9BQ49 75 aa8.31□□□□□ -1.08
DDX41-204ENST00000504807 V9GYV3 84 aa8.31□□□□□ -1.08
DDX41-204ENST00000504807 HIGD1CA8MV81 97 aa8.3□□□□□ -1.08
DDX41-204ENST00000504807 A8MWL6 223 aa8.3□□□□□ -1.08
DDX41-204ENST00000504807 NCR2O95944 276 aa8.3□□□□□ -1.08
DDX41-204ENST00000504807 APCSP02743 223 aa8.3□□□□□ -1.08
DDX41-204ENST00000504807 RAB4AP20338 218 aa8.3□□□□□ -1.08
DDX41-204ENST00000504807 SRSF3P84103 164 aaKnown RBP8.3□□□□□ -1.08
DDX41-204ENST00000504807 RNASEKQ6P5S7 137 aaKnown RBP8.3□□□□□ -1.08
DDX41-204ENST00000504807 AMN1Q8IY45 258 aa8.3□□□□□ -1.08
DDX41-204ENST00000504807 TSKUQ8WUA8 353 aa8.3□□□□□ -1.08
DDX41-204ENST00000504807 LINC00526Q96FQ7 95 aa8.3□□□□□ -1.08
DDX41-204ENST00000504807 IGHV3-64A0A075B6Q5 118 aa8.29□□□□□ -1.08
DDX41-204ENST00000504807 POLR2KP53803 58 aaKnown RBP8.29□□□□□ -1.08
DDX41-204ENST00000504807 PRSS3P2Q8NHM4 247 aa8.29□□□□□ -1.08
DDX41-204ENST00000504807 EIF5A2Q9GZV4 153 aaKnown RBP8.29□□□□□ -1.08
DDX41-204ENST00000504807 ZNF727A8MUV8 499 aa8.28□□□□□ -1.08
DDX41-204ENST00000504807 I3L3M4 83 aa8.28□□□□□ -1.08
DDX41-204ENST00000504807 COX6A2Q02221 97 aa8.28□□□□□ -1.08
DDX41-204ENST00000504807 AMMECR1LQ6DCA0 310 aa8.28□□□□□ -1.08
DDX41-204ENST00000504807 TMEM191AQ9H0A3 160 aa8.28□□□□□ -1.08
DDX41-204ENST00000504807 OSTCQ9NRP0 149 aa8.28□□□□□ -1.08
DDX41-204ENST00000504807 GVQW2A0A096LPI5 108 aaPredicted RBP8.27□□□□□ -1.09
DDX41-204ENST00000504807 LINC00959A0A1B0GUT2 108 aa8.27□□□□□ -1.09
DDX41-204ENST00000504807 A0A1B0GUT8 65 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms