RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 LCE6AA0A183 80 aa6.61□□□□□ -1.35
ACTN4-207ENST00000495553 LINC01549A6NIU2 74 aa6.61□□□□□ -1.35
ACTN4-207ENST00000495553 HIST1H2BKO60814 126 aa6.61□□□□□ -1.35
ACTN4-207ENST00000495553 GAS8-AS1O95177 125 aa6.61□□□□□ -1.35
ACTN4-207ENST00000495553 HIST1H2BJP06899 126 aa6.61□□□□□ -1.35
ACTN4-207ENST00000495553 LINC00614P0C842 121 aa6.61□□□□□ -1.35
ACTN4-207ENST00000495553 HIST1H2BOP23527 126 aa6.61□□□□□ -1.35
ACTN4-207ENST00000495553 HIST1H2BBP33778 126 aa6.61□□□□□ -1.35
ACTN4-207ENST00000495553 IFI27P40305 119 aaPredicted RBP6.61□□□□□ -1.35
ACTN4-207ENST00000495553 AMTP48728 403 aa6.61□□□□□ -1.35
ACTN4-207ENST00000495553 POLR2KP53803 58 aaKnown RBP6.61□□□□□ -1.35
ACTN4-207ENST00000495553 HIST1H2BDP58876 126 aa6.61□□□□□ -1.35
ACTN4-207ENST00000495553 HIST1H2BCP62807 126 aa6.61□□□□□ -1.35
ACTN4-207ENST00000495553 HIST2H2BEQ16778 126 aa6.61□□□□□ -1.35
ACTN4-207ENST00000495553 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.61□□□□□ -1.35
ACTN4-207ENST00000495553 HIST1H2BHQ93079 126 aa6.61□□□□□ -1.35
ACTN4-207ENST00000495553 CHCHD1Q96BP2 118 aaKnown RBP6.61□□□□□ -1.35
ACTN4-207ENST00000495553 HIST1H2BNQ99877 126 aa6.61□□□□□ -1.35
ACTN4-207ENST00000495553 HIST1H2BMQ99879 126 aa6.61□□□□□ -1.35
ACTN4-207ENST00000495553 A0A096LPF7 62 aa6.6□□□□□ -1.35
ACTN4-207ENST00000495553 TRAV8-6A0A0B4J262 113 aa6.6□□□□□ -1.35
ACTN4-207ENST00000495553 IGHV3-38A0A0C4DH36 116 aa6.6□□□□□ -1.35
ACTN4-207ENST00000495553 UBE2L6O14933 153 aa6.6□□□□□ -1.35
ACTN4-207ENST00000495553 HSBP1O75506 76 aa6.6□□□□□ -1.35
ACTN4-207ENST00000495553 LY6G6CO95867 125 aa6.6□□□□□ -1.35
ACTN4-207ENST00000495553 CCL18P55774 89 aa6.6□□□□□ -1.35
ACTN4-207ENST00000495553 TIRAPP58753 221 aa6.6□□□□□ -1.35
ACTN4-207ENST00000495553 LAGE3Q14657 143 aa6.6□□□□□ -1.35
ACTN4-207ENST00000495553 NIT1Q86X76 327 aa6.6□□□□□ -1.35
ACTN4-207ENST00000495553 APLNQ9ULZ1 77 aa6.6□□□□□ -1.35
ACTN4-207ENST00000495553 TRBV6-8A0A0A6YYG3 113 aa6.59□□□□□ -1.35
ACTN4-207ENST00000495553 LINC00694P0DN24 101 aa6.59□□□□□ -1.35
ACTN4-207ENST00000495553 NDUFA6P56556 154 aa6.59□□□□□ -1.35
ACTN4-207ENST00000495553 IQCJQ1A5X6 159 aa6.59□□□□□ -1.35
ACTN4-207ENST00000495553 LINC00476Q8WZB0 136 aa6.59□□□□□ -1.35
ACTN4-207ENST00000495553 TMEM243Q9BU79 118 aa6.59□□□□□ -1.35
ACTN4-207ENST00000495553 H7C423 109 aa6.58□□□□□ -1.36
ACTN4-207ENST00000495553 TSHBP01222 138 aa6.58□□□□□ -1.36
ACTN4-207ENST00000495553 BTF3P20290 206 aaKnown RBP6.58□□□□□ -1.36
ACTN4-207ENST00000495553 LELP1Q5T871 98 aa6.58□□□□□ -1.36
ACTN4-207ENST00000495553 AMMECR1LQ6DCA0 310 aa6.58□□□□□ -1.36
ACTN4-207ENST00000495553 LGALS9CQ6DKI2 356 aa6.58□□□□□ -1.36
ACTN4-207ENST00000495553 UBE2DNLQ8IWF7 75 aa6.58□□□□□ -1.36
ACTN4-207ENST00000495553 CHCHD5Q9BSY4 110 aa6.58□□□□□ -1.36
ACTN4-207ENST00000495553 Q9UF83 564 aa6.58□□□□□ -1.36
ACTN4-207ENST00000495553 CYSLTR1Q9Y271 337 aa6.58□□□□□ -1.36
ACTN4-207ENST00000495553 HYDINQ4G0P3 5121 aa6.58□□□□□ -1.36
ACTN4-207ENST00000495553 IGLV2-18A0A075B6J9 118 aa6.57□□□□□ -1.36
ACTN4-207ENST00000495553 LINC01546A6NGU7 62 aa6.57□□□□□ -1.36
ACTN4-207ENST00000495553 SERF1AO75920 110 aa6.57□□□□□ -1.36
ACTN4-207ENST00000495553 LYPD5Q6UWN5 251 aa6.57□□□□□ -1.36
ACTN4-207ENST00000495553 TMEM101Q96IK0 257 aa6.57□□□□□ -1.36
ACTN4-207ENST00000495553 TMA7Q9Y2S6 64 aaKnown RBP6.57□□□□□ -1.36
ACTN4-207ENST00000495553 A0A087WX48 190 aa6.56□□□□□ -1.36
ACTN4-207ENST00000495553 TMEM262E9PQX1 116 aa6.56□□□□□ -1.36
ACTN4-207ENST00000495553 HBDP02042 147 aa6.56□□□□□ -1.36
ACTN4-207ENST00000495553 S100A2P29034 98 aa6.56□□□□□ -1.36
ACTN4-207ENST00000495553 PAPPA-AS1Q5QFB9 102 aa6.56□□□□□ -1.36
ACTN4-207ENST00000495553 DGAT2L7PQ6IED9 249 aa6.56□□□□□ -1.36
ACTN4-207ENST00000495553 DNAH6Q9C0G6 4158 aa6.56□□□□□ -1.36
ACTN4-207ENST00000495553 ZNF25P17030 456 aaPredicted RBP6.55□□□□□ -1.36
ACTN4-207ENST00000495553 COA6Q5JTJ3 125 aaKnown RBP6.55□□□□□ -1.36
ACTN4-207ENST00000495553 HSPB8Q9UJY1 196 aa6.55□□□□□ -1.36
ACTN4-207ENST00000495553 MRPS16Q9Y3D3 137 aaKnown RBP6.55□□□□□ -1.36
ACTN4-207ENST00000495553 KMT2AQ03164 3969 aa6.54□□□□□ -1.36
ACTN4-207ENST00000495553 ATP5LO75964 103 aa6.54□□□□□ -1.36
ACTN4-207ENST00000495553 ESRGQ1W209 222 aa6.54□□□□□ -1.36
ACTN4-207ENST00000495553 C2orf66Q6UXQ4 117 aa6.54□□□□□ -1.36
ACTN4-207ENST00000495553 Q6ZN92 141 aa6.54□□□□□ -1.36
ACTN4-207ENST00000495553 NTM-AS1Q6ZSK4 140 aa6.54□□□□□ -1.36
ACTN4-207ENST00000495553 C20orf203Q8NBC4 194 aa6.54□□□□□ -1.36
ACTN4-207ENST00000495553 OR5A1Q8NGJ0 315 aa6.54□□□□□ -1.36
ACTN4-207ENST00000495553 DEFB104AQ8WTQ1 72 aa6.54□□□□□ -1.36
ACTN4-207ENST00000495553 TOMM6Q96B49 74 aa6.54□□□□□ -1.36
ACTN4-207ENST00000495553 SCGB3A1Q96QR1 104 aa6.54□□□□□ -1.36
ACTN4-207ENST00000495553 CHCHD7Q9BUK0 85 aa6.54□□□□□ -1.36
ACTN4-207ENST00000495553 SPANXA1Q9NS26 97 aa6.54□□□□□ -1.36
ACTN4-207ENST00000495553 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.53□□□□□ -1.36
ACTN4-207ENST00000495553 TRAV9-2A0A087WT02 112 aa6.53□□□□□ -1.36
ACTN4-207ENST00000495553 IGKV2-29A2NJV5 120 aaPredicted RBP6.53□□□□□ -1.36
ACTN4-207ENST00000495553 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.53□□□□□ -1.36
ACTN4-207ENST00000495553 LEPROTL1O95214 131 aa6.53□□□□□ -1.36
ACTN4-207ENST00000495553 NPSP0C0P6 89 aa6.53□□□□□ -1.36
ACTN4-207ENST00000495553 ESDP10768 282 aa6.53□□□□□ -1.36
ACTN4-207ENST00000495553 GAGE6Q13070 117 aa6.53□□□□□ -1.36
ACTN4-207ENST00000495553 TMEM141Q96I45 108 aa6.53□□□□□ -1.36
ACTN4-207ENST00000495553 TIMM21Q9BVV7 248 aa6.53□□□□□ -1.36
ACTN4-207ENST00000495553 DNAH2Q9P225 4427 aa6.53□□□□□ -1.36
ACTN4-207ENST00000495553 DNAH10Q8IVF4 4471 aa6.53□□□□□ -1.36
ACTN4-207ENST00000495553 K7EP13 123 aa6.52□□□□□ -1.37
ACTN4-207ENST00000495553 FGF6P10767 208 aa6.52□□□□□ -1.37
ACTN4-207ENST00000495553 PMCHL1Q16048 86 aa6.52□□□□□ -1.37
ACTN4-207ENST00000495553 ERASQ7Z444 233 aa6.52□□□□□ -1.37
ACTN4-207ENST00000495553 MRPL52Q86TS9 123 aaKnown RBP6.52□□□□□ -1.37
ACTN4-207ENST00000495553 PACRGQ96M98 296 aaPredicted RBP6.52□□□□□ -1.37
ACTN4-207ENST00000495553 PYGO1Q9Y3Y4 419 aa6.52□□□□□ -1.37
ACTN4-207ENST00000495553 LINC00588Q9Y4M8 146 aa6.52□□□□□ -1.37
ACTN4-207ENST00000495553 CSDC2Q9Y534 153 aaKnown RBP6.52□□□□□ -1.37
ACTN4-207ENST00000495553 A0A1B0GUV1 79 aa6.51□□□□□ -1.37
ACTN4-207ENST00000495553 SIVA1O15304 175 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms