RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 AMTP48728 403 aa9.44□□□□□ -0.9
ATG4B-223ENST00000493618 DGAT2L7PQ6IED9 249 aa9.44□□□□□ -0.9
ATG4B-223ENST00000493618 GATD1Q8NB37 220 aa9.44□□□□□ -0.9
ATG4B-223ENST00000493618 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.44□□□□□ -0.9
ATG4B-223ENST00000493618 hCG_2014768A0A024R1R8 64 aa9.43□□□□□ -0.9
ATG4B-223ENST00000493618 KRTAP29-1A8MX34 341 aaPredicted RBP9.43□□□□□ -0.9
ATG4B-223ENST00000493618 PANO1I0J062 215 aa9.43□□□□□ -0.9
ATG4B-223ENST00000493618 FOXA3P55318 350 aaPredicted RBP9.43□□□□□ -0.9
ATG4B-223ENST00000493618 COTL1Q14019 142 aa9.43□□□□□ -0.9
ATG4B-223ENST00000493618 WDR73Q6P4I2 378 aa9.43□□□□□ -0.9
ATG4B-223ENST00000493618 ALKAL2Q6UX46 152 aa9.43□□□□□ -0.9
ATG4B-223ENST00000493618 C9orf163Q8N9P6 203 aa9.43□□□□□ -0.9
ATG4B-223ENST00000493618 GTSF1Q8WW33 167 aa9.43□□□□□ -0.9
ATG4B-223ENST00000493618 RPL39LQ96EH5 51 aaKnown RBP9.43□□□□□ -0.9
ATG4B-223ENST00000493618 PGLYRP4Q96LB8 373 aa9.43□□□□□ -0.9
ATG4B-223ENST00000493618 IGKV3OR2-268A0A0C4DH90 116 aa9.42□□□□□ -0.9
ATG4B-223ENST00000493618 A0A1B0GUV1 79 aa9.42□□□□□ -0.9
ATG4B-223ENST00000493618 hDV102S1A0JD36 115 aa9.42□□□□□ -0.9
ATG4B-223ENST00000493618 TAGLN2P37802 199 aaKnown RBP9.42□□□□□ -0.9
ATG4B-223ENST00000493618 CEBPGP53567 150 aa9.42□□□□□ -0.9
ATG4B-223ENST00000493618 Q6ZNX1 250 aa9.42□□□□□ -0.9
ATG4B-223ENST00000493618 TRAV8-4A0A0B4J246 113 aa9.41□□□□□ -0.9
ATG4B-223ENST00000493618 GATCO43716 136 aaKnown RBP9.41□□□□□ -0.9
ATG4B-223ENST00000493618 RPL37AP61513 92 aaKnown RBP9.41□□□□□ -0.9
ATG4B-223ENST00000493618 AKAP14Q86UN6 197 aa9.41□□□□□ -0.9
ATG4B-223ENST00000493618 CNFNQ9BYD5 112 aa9.41□□□□□ -0.9
ATG4B-223ENST00000493618 CLRN3Q8NCR9 226 aa9.4□□□□□ -0.9
ATG4B-223ENST00000493618 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.39□□□□□ -0.91
ATG4B-223ENST00000493618 IGKV2-29A2NJV5 120 aaPredicted RBP9.39□□□□□ -0.91
ATG4B-223ENST00000493618 GAGE12HA6NDE8 117 aa9.39□□□□□ -0.91
ATG4B-223ENST00000493618 SDIM1Q6ZPB5 146 aa9.39□□□□□ -0.91
ATG4B-223ENST00000493618 SLPIP03973 132 aa9.38□□□□□ -0.91
ATG4B-223ENST00000493618 HNRNPA3P51991 378 aaKnown RBP9.38□□□□□ -0.91
ATG4B-223ENST00000493618 BLOC1S1P78537 153 aa9.38□□□□□ -0.91
ATG4B-223ENST00000493618 SMIM15Q7Z3B0 74 aa9.38□□□□□ -0.91
ATG4B-223ENST00000493618 AP5S1Q9NUS5 200 aa9.38□□□□□ -0.91
ATG4B-223ENST00000493618 TMEM250H0YL14 139 aa9.37□□□□□ -0.91
ATG4B-223ENST00000493618 CHTF8P0CG12 524 aa9.37□□□□□ -0.91
ATG4B-223ENST00000493618 CNBPP62633 177 aaKnown RBP9.37□□□□□ -0.91
ATG4B-223ENST00000493618 AMMECR1LQ6DCA0 310 aa9.37□□□□□ -0.91
ATG4B-223ENST00000493618 RNASEKQ6P5S7 137 aaKnown RBP9.37□□□□□ -0.91
ATG4B-223ENST00000493618 GAS8-AS1O95177 125 aa9.36□□□□□ -0.91
ATG4B-223ENST00000493618 APCSP02743 223 aa9.36□□□□□ -0.91
ATG4B-223ENST00000493618 FAM231DQ6ZW35 169 aa9.36□□□□□ -0.91
ATG4B-223ENST00000493618 C15orf56Q8N910 161 aa9.36□□□□□ -0.91
ATG4B-223ENST00000493618 DPH3Q96FX2 82 aa9.36□□□□□ -0.91
ATG4B-223ENST00000493618 IGHV3-64A0A075B6Q5 118 aa9.35□□□□□ -0.91
ATG4B-223ENST00000493618 SDHAF1A6NFY7 115 aa9.35□□□□□ -0.91
ATG4B-223ENST00000493618 A8MWL6 223 aa9.35□□□□□ -0.91
ATG4B-223ENST00000493618 HIGD2BQ4VC39 106 aa9.35□□□□□ -0.91
ATG4B-223ENST00000493618 LYPD6BQ8NI32 183 aa9.35□□□□□ -0.91
ATG4B-223ENST00000493618 EIF5A2Q9GZV4 153 aaKnown RBP9.35□□□□□ -0.91
ATG4B-223ENST00000493618 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.34□□□□□ -0.91
ATG4B-223ENST00000493618 NCR2O95944 276 aa9.34□□□□□ -0.91
ATG4B-223ENST00000493618 FGF6P10767 208 aa9.34□□□□□ -0.91
ATG4B-223ENST00000493618 PMCHP20382 165 aa9.34□□□□□ -0.91
ATG4B-223ENST00000493618 CHCHD10Q8WYQ3 142 aaPredicted RBP9.34□□□□□ -0.91
ATG4B-223ENST00000493618 OXTP01178 125 aa9.33□□□□□ -0.92
ATG4B-223ENST00000493618 BORCS7Q96B45 105 aa9.33□□□□□ -0.92
ATG4B-223ENST00000493618 SMIM7Q9BQ49 75 aa9.33□□□□□ -0.92
ATG4B-223ENST00000493618 FAM231BA6NCW3 169 aa9.32□□□□□ -0.92
ATG4B-223ENST00000493618 I3L3M4 83 aa9.32□□□□□ -0.92
ATG4B-223ENST00000493618 CIRBPQ14011 172 aaKnown RBP9.32□□□□□ -0.92
ATG4B-223ENST00000493618 TEX261Q6UWH6 196 aa9.32□□□□□ -0.92
ATG4B-223ENST00000493618 LINC01551Q86U37 167 aa9.32□□□□□ -0.92
ATG4B-223ENST00000493618 TMEM242Q9NWH2 141 aa9.32□□□□□ -0.92
ATG4B-223ENST00000493618 A0A087WYN8 130 aa9.31□□□□□ -0.92
ATG4B-223ENST00000493618 ZNF727A8MUV8 499 aa9.31□□□□□ -0.92
ATG4B-223ENST00000493618 HIGD1CA8MV81 97 aa9.31□□□□□ -0.92
ATG4B-223ENST00000493618 TSHBP01222 138 aa9.31□□□□□ -0.92
ATG4B-223ENST00000493618 CT83Q5H943 113 aa9.31□□□□□ -0.92
ATG4B-223ENST00000493618 CFAP161Q6P656 301 aa9.31□□□□□ -0.92
ATG4B-223ENST00000493618 ST20Q9HBF5 79 aa9.31□□□□□ -0.92
ATG4B-223ENST00000493618 TRBV6-5A0A0K0K1A5 114 aa9.3□□□□□ -0.92
ATG4B-223ENST00000493618 H7C423 109 aa9.3□□□□□ -0.92
ATG4B-223ENST00000493618 SRP19P09132 144 aaKnown RBP9.3□□□□□ -0.92
ATG4B-223ENST00000493618 RPS10P46783 165 aaKnown RBP9.3□□□□□ -0.92
ATG4B-223ENST00000493618 COX6A2Q02221 97 aa9.3□□□□□ -0.92
ATG4B-223ENST00000493618 SPACA4Q8TDM5 124 aa9.3□□□□□ -0.92
ATG4B-223ENST00000493618 TSKUQ8WUA8 353 aa9.3□□□□□ -0.92
ATG4B-223ENST00000493618 RNF185Q96GF1 192 aa9.3□□□□□ -0.92
ATG4B-223ENST00000493618 FAM210AQ96ND0 272 aa9.3□□□□□ -0.92
ATG4B-223ENST00000493618 A0A1B0GUT8 65 aa9.29□□□□□ -0.92
ATG4B-223ENST00000493618 SMKR1H3BMG3 65 aa9.29□□□□□ -0.92
ATG4B-223ENST00000493618 XCL1P47992 114 aa9.29□□□□□ -0.92
ATG4B-223ENST00000493618 FOXI1Q12951 378 aa9.29□□□□□ -0.92
ATG4B-223ENST00000493618 AMN1Q8IY45 258 aa9.29□□□□□ -0.92
ATG4B-223ENST00000493618 OR5A1Q8NGJ0 315 aa9.29□□□□□ -0.92
ATG4B-223ENST00000493618 PRSS3P2Q8NHM4 247 aa9.29□□□□□ -0.92
ATG4B-223ENST00000493618 TMEM101Q96IK0 257 aa9.29□□□□□ -0.92
ATG4B-223ENST00000493618 BTF3L4Q96K17 158 aa9.29□□□□□ -0.92
ATG4B-223ENST00000493618 TMEM191AQ9H0A3 160 aa9.29□□□□□ -0.92
ATG4B-223ENST00000493618 HMCN2Q8NDA2 5059 aa9.28□□□□□ -0.92
ATG4B-223ENST00000493618 IGKV2-24A0A0C4DH68 120 aa9.28□□□□□ -0.92
ATG4B-223ENST00000493618 ESDP10768 282 aa9.28□□□□□ -0.92
ATG4B-223ENST00000493618 ZNF25P17030 456 aaPredicted RBP9.28□□□□□ -0.92
ATG4B-223ENST00000493618 RAB4AP20338 218 aa9.28□□□□□ -0.92
ATG4B-223ENST00000493618 LINC00526Q96FQ7 95 aa9.28□□□□□ -0.92
ATG4B-223ENST00000493618 OSTCQ9NRP0 149 aa9.28□□□□□ -0.92
ATG4B-223ENST00000493618 GVQW2A0A096LPI5 108 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms