RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 GATD1Q8NB37 220 aa5.7□□□□□ -1.5
HDAC3-211ENST00000491581 OCC1Q8TAD7 63 aa5.7□□□□□ -1.5
HDAC3-211ENST00000491581 GTSF1Q8WW33 167 aa5.7□□□□□ -1.5
HDAC3-211ENST00000491581 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
HDAC3-211ENST00000491581 TRAV1-1A0A0B4J248 108 aa5.69□□□□□ -1.5
HDAC3-211ENST00000491581 IGHV1-24A0A0C4DH33 117 aa5.69□□□□□ -1.5
HDAC3-211ENST00000491581 P01737 135 aa5.69□□□□□ -1.5
HDAC3-211ENST00000491581 BCL2P10415 239 aa5.69□□□□□ -1.5
HDAC3-211ENST00000491581 RPL37AP61513 92 aaKnown RBP5.69□□□□□ -1.5
HDAC3-211ENST00000491581 MIAQ16674 131 aa5.69□□□□□ -1.5
HDAC3-211ENST00000491581 RASL11AQ6T310 242 aa5.69□□□□□ -1.5
HDAC3-211ENST00000491581 Q6ZNX1 250 aa5.69□□□□□ -1.5
HDAC3-211ENST00000491581 SDIM1Q6ZPB5 146 aa5.69□□□□□ -1.5
HDAC3-211ENST00000491581 C9orf163Q8N9P6 203 aa5.69□□□□□ -1.5
HDAC3-211ENST00000491581 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.68□□□□□ -1.5
HDAC3-211ENST00000491581 hDV102S1A0JD36 115 aa5.68□□□□□ -1.5
HDAC3-211ENST00000491581 IGKV2-29A2NJV5 120 aaPredicted RBP5.68□□□□□ -1.5
HDAC3-211ENST00000491581 IFNA1P01562 189 aa5.68□□□□□ -1.5
HDAC3-211ENST00000491581 CTRLP40313 264 aa5.68□□□□□ -1.5
HDAC3-211ENST00000491581 TWIST1Q15672 202 aa5.68□□□□□ -1.5
HDAC3-211ENST00000491581 HIGD2BQ4VC39 106 aa5.68□□□□□ -1.5
HDAC3-211ENST00000491581 ALKAL2Q6UX46 152 aa5.68□□□□□ -1.5
HDAC3-211ENST00000491581 C15orf56Q8N910 161 aa5.68□□□□□ -1.5
HDAC3-211ENST00000491581 LINC00526Q96FQ7 95 aa5.68□□□□□ -1.5
HDAC3-211ENST00000491581 TMEM243Q9BU79 118 aa5.68□□□□□ -1.5
HDAC3-211ENST00000491581 GAGE12HA6NDE8 117 aa5.67□□□□□ -1.5
HDAC3-211ENST00000491581 TEX46H3BTG2 121 aa5.67□□□□□ -1.5
HDAC3-211ENST00000491581 AMTP48728 403 aa5.67□□□□□ -1.5
HDAC3-211ENST00000491581 CEBPGP53567 150 aa5.67□□□□□ -1.5
HDAC3-211ENST00000491581 CACNG7P62955 275 aa5.67□□□□□ -1.5
HDAC3-211ENST00000491581 C9orf62Q8N4C0 152 aa5.67□□□□□ -1.5
HDAC3-211ENST00000491581 DPH3P1Q9H4G8 78 aa5.67□□□□□ -1.5
HDAC3-211ENST00000491581 NIT2Q9NQR4 276 aa5.67□□□□□ -1.5
HDAC3-211ENST00000491581 HMCN2Q8NDA2 5059 aa5.66□□□□□ -1.5
HDAC3-211ENST00000491581 RPS20P60866 119 aaKnown RBP5.66□□□□□ -1.5
HDAC3-211ENST00000491581 EIF5AP63241 154 aaKnown RBP5.66□□□□□ -1.5
HDAC3-211ENST00000491581 TCTE3Q8IZS6 198 aa5.66□□□□□ -1.5
HDAC3-211ENST00000491581 PGLYRP4Q96LB8 373 aa5.66□□□□□ -1.5
HDAC3-211ENST00000491581 RPP21Q9H633 154 aaKnown RBP5.66□□□□□ -1.5
HDAC3-211ENST00000491581 PDE6DO43924 150 aa5.65□□□□□ -1.5
HDAC3-211ENST00000491581 MT1HL1P0DM35 61 aa5.65□□□□□ -1.5
HDAC3-211ENST00000491581 C14orf177Q52M58 125 aa5.65□□□□□ -1.5
HDAC3-211ENST00000491581 LCE1DQ5T752 114 aa5.65□□□□□ -1.5
HDAC3-211ENST00000491581 A0A087WYN8 130 aa5.64□□□□□ -1.51
HDAC3-211ENST00000491581 IGKV2-24A0A0C4DH68 120 aa5.64□□□□□ -1.51
HDAC3-211ENST00000491581 FAM231BA6NCW3 169 aa5.64□□□□□ -1.51
HDAC3-211ENST00000491581 F2Z2F3 143 aa5.64□□□□□ -1.51
HDAC3-211ENST00000491581 SMKR1H3BMG3 65 aa5.64□□□□□ -1.51
HDAC3-211ENST00000491581 H7C1H1 209 aa5.64□□□□□ -1.51
HDAC3-211ENST00000491581 TRGC1P0CF51 173 aa5.64□□□□□ -1.51
HDAC3-211ENST00000491581 RPS10P46783 165 aaKnown RBP5.64□□□□□ -1.51
HDAC3-211ENST00000491581 COX6A2Q02221 97 aa5.64□□□□□ -1.51
HDAC3-211ENST00000491581 COTL1Q14019 142 aa5.64□□□□□ -1.51
HDAC3-211ENST00000491581 TMEM97Q5BJF2 176 aa5.64□□□□□ -1.51
HDAC3-211ENST00000491581 DGAT2L7PQ6IED9 249 aa5.64□□□□□ -1.51
HDAC3-211ENST00000491581 SLC51BQ86UW2 128 aa5.64□□□□□ -1.51
HDAC3-211ENST00000491581 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.64□□□□□ -1.51
HDAC3-211ENST00000491581 PRSS3P2Q8NHM4 247 aa5.64□□□□□ -1.51
HDAC3-211ENST00000491581 A0A1B0GUV1 79 aa5.63□□□□□ -1.51
HDAC3-211ENST00000491581 A0A1B0GVG6 124 aa5.63□□□□□ -1.51
HDAC3-211ENST00000491581 UBE2L6O14933 153 aa5.63□□□□□ -1.51
HDAC3-211ENST00000491581 NCR2O95944 276 aa5.63□□□□□ -1.51
HDAC3-211ENST00000491581 RNASEKQ6P5S7 137 aaKnown RBP5.63□□□□□ -1.51
HDAC3-211ENST00000491581 CHCHD10Q8WYQ3 142 aaPredicted RBP5.63□□□□□ -1.51
HDAC3-211ENST00000491581 CNFNQ9BYD5 112 aa5.63□□□□□ -1.51
HDAC3-211ENST00000491581 TMEM242Q9NWH2 141 aa5.63□□□□□ -1.51
HDAC3-211ENST00000491581 UBR4Q5T4S7 5183 aa5.62□□□□□ -1.51
HDAC3-211ENST00000491581 SDHAF1A6NFY7 115 aa5.62□□□□□ -1.51
HDAC3-211ENST00000491581 PHOX2AO14813 284 aa5.62□□□□□ -1.51
HDAC3-211ENST00000491581 GATCO43716 136 aaKnown RBP5.62□□□□□ -1.51
HDAC3-211ENST00000491581 TSHBP01222 138 aa5.62□□□□□ -1.51
HDAC3-211ENST00000491581 FGF6P10767 208 aa5.62□□□□□ -1.51
HDAC3-211ENST00000491581 CNBPP62633 177 aaKnown RBP5.62□□□□□ -1.51
HDAC3-211ENST00000491581 CIRBPQ14011 172 aaKnown RBP5.62□□□□□ -1.51
HDAC3-211ENST00000491581 RNASE13Q5GAN3 156 aaKnown RBP5.62□□□□□ -1.51
HDAC3-211ENST00000491581 EIF5AL1Q6IS14 154 aaKnown RBP5.62□□□□□ -1.51
HDAC3-211ENST00000491581 LYPD6BQ8NI32 183 aa5.62□□□□□ -1.51
HDAC3-211ENST00000491581 SPACA4Q8TDM5 124 aa5.62□□□□□ -1.51
HDAC3-211ENST00000491581 SMIM12Q96EX1 92 aa5.62□□□□□ -1.51
HDAC3-211ENST00000491581 DPH3Q96FX2 82 aa5.62□□□□□ -1.51
HDAC3-211ENST00000491581 RNF185Q96GF1 192 aa5.62□□□□□ -1.51
HDAC3-211ENST00000491581 IGHV3-64A0A075B6Q5 118 aa5.61□□□□□ -1.51
HDAC3-211ENST00000491581 A0A096LNI7 61 aa5.61□□□□□ -1.51
HDAC3-211ENST00000491581 XKRY2A2RUG3 117 aa5.61□□□□□ -1.51
HDAC3-211ENST00000491581 C9JQL5 133 aa5.61□□□□□ -1.51
HDAC3-211ENST00000491581 XCL1P47992 114 aa5.61□□□□□ -1.51
HDAC3-211ENST00000491581 PKIAP61925 76 aa5.61□□□□□ -1.51
HDAC3-211ENST00000491581 FOXI1Q12951 378 aa5.61□□□□□ -1.51
HDAC3-211ENST00000491581 WDR73Q6P4I2 378 aa5.61□□□□□ -1.51
HDAC3-211ENST00000491581 AMN1Q8IY45 258 aa5.61□□□□□ -1.51
HDAC3-211ENST00000491581 TRAV8-4A0A0B4J246 113 aa5.6□□□□□ -1.51
HDAC3-211ENST00000491581 CCL25O15444 150 aa5.6□□□□□ -1.51
HDAC3-211ENST00000491581 OXTP01178 125 aa5.6□□□□□ -1.51
HDAC3-211ENST00000491581 APCSP02743 223 aa5.6□□□□□ -1.51
HDAC3-211ENST00000491581 SRSF3P84103 164 aaKnown RBP5.6□□□□□ -1.51
HDAC3-211ENST00000491581 MAJINQ3KP22 176 aa5.6□□□□□ -1.51
HDAC3-211ENST00000491581 AMMECR1LQ6DCA0 310 aa5.6□□□□□ -1.51
HDAC3-211ENST00000491581 AKAP14Q86UN6 197 aa5.6□□□□□ -1.51
HDAC3-211ENST00000491581 CLRN3Q8NCR9 226 aa5.6□□□□□ -1.51
HDAC3-211ENST00000491581 SRP19P09132 144 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 511.7 ms