RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 RPL23P62829 140 aaKnown RBP8.08□□□□□ -1.12
MSH5-216ENST00000484309 TMEM241Q24JQ0 296 aa8.08□□□□□ -1.12
MSH5-216ENST00000484309 LINC00269Q8N2A0 174 aa8.08□□□□□ -1.12
MSH5-216ENST00000484309 TSKUQ8WUA8 353 aa8.08□□□□□ -1.12
MSH5-216ENST00000484309 ISOC2Q96AB3 205 aa8.08□□□□□ -1.12
MSH5-216ENST00000484309 V9GYV3 84 aa8.08□□□□□ -1.12
MSH5-216ENST00000484309 GAS8-AS1O95177 125 aa8.07□□□□□ -1.12
MSH5-216ENST00000484309 SMR3BP02814 79 aaPredicted RBP8.07□□□□□ -1.12
MSH5-216ENST00000484309 COTL1Q14019 142 aa8.07□□□□□ -1.12
MSH5-216ENST00000484309 NAT8Q9UHE5 227 aa8.07□□□□□ -1.12
MSH5-216ENST00000484309 DNAH8Q96JB1 4490 aa8.07□□□□□ -1.12
MSH5-216ENST00000484309 IGLV4-60A0A075B6I1 120 aa8.06□□□□□ -1.12
MSH5-216ENST00000484309 IGLV10-54A0A075B6I4 117 aa8.06□□□□□ -1.12
MSH5-216ENST00000484309 A0A1B0GUT8 65 aa8.06□□□□□ -1.12
MSH5-216ENST00000484309 UBE2L6O14933 153 aa8.06□□□□□ -1.12
MSH5-216ENST00000484309 PEA15Q15121 130 aa8.06□□□□□ -1.12
MSH5-216ENST00000484309 MIAQ16674 131 aa8.06□□□□□ -1.12
MSH5-216ENST00000484309 FAM74A3Q4VXF1 159 aa8.06□□□□□ -1.12
MSH5-216ENST00000484309 C20orf203Q8NBC4 194 aa8.06□□□□□ -1.12
MSH5-216ENST00000484309 GFRA4Q9GZZ7 299 aa8.06□□□□□ -1.12
MSH5-216ENST00000484309 FAM30AQ9NZY2 134 aa8.06□□□□□ -1.12
MSH5-216ENST00000484309 SDHAF1A6NFY7 115 aa8.05□□□□□ -1.12
MSH5-216ENST00000484309 REG3AQ06141 175 aa8.05□□□□□ -1.12
MSH5-216ENST00000484309 NUP35Q8NFH5 326 aa8.05□□□□□ -1.12
MSH5-216ENST00000484309 FRZBQ92765 325 aa8.05□□□□□ -1.12
MSH5-216ENST00000484309 PRR34Q9NV39 138 aa8.05□□□□□ -1.12
MSH5-216ENST00000484309 EPM2AB3EWF7 344 aa8.04□□□□□ -1.12
MSH5-216ENST00000484309 USP17L23D6RBM5 183 aa8.04□□□□□ -1.12
MSH5-216ENST00000484309 AMN1Q8IY45 258 aa8.04□□□□□ -1.12
MSH5-216ENST00000484309 RNF185Q96GF1 192 aa8.04□□□□□ -1.12
MSH5-216ENST00000484309 TMEM70Q9BUB7 260 aa8.04□□□□□ -1.12
MSH5-216ENST00000484309 TMEM191AQ9H0A3 160 aa8.04□□□□□ -1.12
MSH5-216ENST00000484309 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.03□□□□□ -1.12
MSH5-216ENST00000484309 IGKV3OR2-268A0A0C4DH90 116 aa8.03□□□□□ -1.12
MSH5-216ENST00000484309 IGKV2-29A2NJV5 120 aaPredicted RBP8.03□□□□□ -1.12
MSH5-216ENST00000484309 FAM231BA6NCW3 169 aa8.03□□□□□ -1.12
MSH5-216ENST00000484309 SMKR1H3BMG3 65 aa8.03□□□□□ -1.12
MSH5-216ENST00000484309 NCR2O95944 276 aa8.03□□□□□ -1.12
MSH5-216ENST00000484309 APCSP02743 223 aa8.03□□□□□ -1.12
MSH5-216ENST00000484309 RPS10P46783 165 aaKnown RBP8.03□□□□□ -1.12
MSH5-216ENST00000484309 RIGQ13278 110 aa8.03□□□□□ -1.12
MSH5-216ENST00000484309 Q5VSD8 79 aa8.03□□□□□ -1.12
MSH5-216ENST00000484309 KRTAP26-1Q6PEX3 210 aa8.03□□□□□ -1.12
MSH5-216ENST00000484309 A0A1B0GUV1 79 aa8.02□□□□□ -1.13
MSH5-216ENST00000484309 RAB4AP20338 218 aa8.02□□□□□ -1.13
MSH5-216ENST00000484309 PMCHP20382 165 aa8.02□□□□□ -1.13
MSH5-216ENST00000484309 ST20Q9HBF5 79 aa8.02□□□□□ -1.13
MSH5-216ENST00000484309 TMEM242Q9NWH2 141 aa8.02□□□□□ -1.13
MSH5-216ENST00000484309 NAT8BQ9UHF3 227 aa8.02□□□□□ -1.13
MSH5-216ENST00000484309 I3L3M4 83 aa8.01□□□□□ -1.13
MSH5-216ENST00000484309 C14orf177Q52M58 125 aa8.01□□□□□ -1.13
MSH5-216ENST00000484309 AMMECR1LQ6DCA0 310 aa8.01□□□□□ -1.13
MSH5-216ENST00000484309 RNASEKQ6P5S7 137 aaKnown RBP8.01□□□□□ -1.13
MSH5-216ENST00000484309 SMDT1Q9H4I9 107 aa8.01□□□□□ -1.13
MSH5-216ENST00000484309 FAT1Q14517 4588 aa8.01□□□□□ -1.13
MSH5-216ENST00000484309 TRBV6-5A0A0K0K1A5 114 aa8□□□□□ -1.13
MSH5-216ENST00000484309 SMIM27A0A1W2PRY6 76 aa8□□□□□ -1.13
MSH5-216ENST00000484309 TSHBP01222 138 aa8□□□□□ -1.13
MSH5-216ENST00000484309 PRSS1P07477 247 aa8□□□□□ -1.13
MSH5-216ENST00000484309 CAMPP49913 170 aa8□□□□□ -1.13
MSH5-216ENST00000484309 MRAP2Q96G30 205 aa8□□□□□ -1.13
MSH5-216ENST00000484309 VPS13BQ7Z7G8 4022 aa7.99□□□□□ -1.13
MSH5-216ENST00000484309 FGF6P10767 208 aa7.99□□□□□ -1.13
MSH5-216ENST00000484309 MRPL54Q6P161 138 aaKnown RBP7.99□□□□□ -1.13
MSH5-216ENST00000484309 Q6ZSA8 131 aa7.99□□□□□ -1.13
MSH5-216ENST00000484309 TRAV8-4A0A0B4J246 113 aa7.98□□□□□ -1.13
MSH5-216ENST00000484309 POLR2KP53803 58 aaKnown RBP7.98□□□□□ -1.13
MSH5-216ENST00000484309 RAB14P61106 215 aa7.98□□□□□ -1.13
MSH5-216ENST00000484309 MRPL51Q4U2R6 128 aaKnown RBP7.98□□□□□ -1.13
MSH5-216ENST00000484309 GAGE12HA6NDE8 117 aa7.97□□□□□ -1.13
MSH5-216ENST00000484309 FAM104BQ5XKR9 115 aa7.97□□□□□ -1.13
MSH5-216ENST00000484309 SCXQ7RTU7 201 aa7.97□□□□□ -1.13
MSH5-216ENST00000484309 NRACQ8N912 160 aa7.97□□□□□ -1.13
MSH5-216ENST00000484309 hDV102S1A0JD36 115 aa7.96□□□□□ -1.14
MSH5-216ENST00000484309 H7C423 109 aa7.96□□□□□ -1.14
MSH5-216ENST00000484309 INAFM2P0DMQ5 153 aa7.96□□□□□ -1.14
MSH5-216ENST00000484309 ESDP10768 282 aa7.96□□□□□ -1.14
MSH5-216ENST00000484309 FLG2Q5D862 2391 aaPredicted RBP7.95□□□□□ -1.14
MSH5-216ENST00000484309 TRBV27A0A0K0K1C4 114 aa7.95□□□□□ -1.14
MSH5-216ENST00000484309 FAM229AH3BQW9 127 aa7.95□□□□□ -1.14
MSH5-216ENST00000484309 FCER1GP30273 86 aa7.95□□□□□ -1.14
MSH5-216ENST00000484309 SUMO2P61956 95 aaKnown RBP7.95□□□□□ -1.14
MSH5-216ENST00000484309 CHCHD10Q8WYQ3 142 aaPredicted RBP7.95□□□□□ -1.14
MSH5-216ENST00000484309 TMEM101Q96IK0 257 aa7.95□□□□□ -1.14
MSH5-216ENST00000484309 BTF3L4Q96K17 158 aa7.95□□□□□ -1.14
MSH5-216ENST00000484309 A0A1B0GW15 77 aa7.94□□□□□ -1.14
MSH5-216ENST00000484309 A0A1B0GXF2 115 aa7.94□□□□□ -1.14
MSH5-216ENST00000484309 C7orf77A4D0Y5 90 aa7.94□□□□□ -1.14
MSH5-216ENST00000484309 ZNF25P17030 456 aaPredicted RBP7.94□□□□□ -1.14
MSH5-216ENST00000484309 CKS2P33552 79 aa7.94□□□□□ -1.14
MSH5-216ENST00000484309 HBBP68871 147 aa7.94□□□□□ -1.14
MSH5-216ENST00000484309 LINC00528Q8N1L1 170 aa7.94□□□□□ -1.14
MSH5-216ENST00000484309 OR5A1Q8NGJ0 315 aa7.94□□□□□ -1.14
MSH5-216ENST00000484309 SRRM2Q9UQ35 2752 aaKnown RBP7.93□□□□□ -1.14
MSH5-216ENST00000484309 D6R8Y8 96 aa7.93□□□□□ -1.14
MSH5-216ENST00000484309 VCYO14598 125 aa7.93□□□□□ -1.14
MSH5-216ENST00000484309 HIGD2BQ4VC39 106 aa7.93□□□□□ -1.14
MSH5-216ENST00000484309 CLLU1Q5K131 121 aa7.93□□□□□ -1.14
MSH5-216ENST00000484309 C15orf56Q8N910 161 aa7.93□□□□□ -1.14
MSH5-216ENST00000484309 CLRN3Q8NCR9 226 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms