RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 BAP18Q8IXM2 172 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 EXOC3-AS1Q8N2X6 119 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 C9orf62Q8N4C0 152 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 RPP25LQ8N5L8 163 aaKnown RBP2.58□□□□□ -2
UPF3A-207ENST00000481131 OR4B1Q8NGF8 309 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 LINC01587Q99440 93 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 ZNF471Q9BX82 626 aaPredicted RBP2.58□□□□□ -2
UPF3A-207ENST00000481131 MRPL32Q9BYC8 188 aaKnown RBP2.58□□□□□ -2
UPF3A-207ENST00000481131 KCNIP2Q9NS61 270 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 RPRMQ9NS64 109 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 TMEM14CQ9P0S9 112 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 TIMM9Q9Y5J7 89 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 U3KQK5 164 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 HLA-DRB4X5D2U9 266 aa2.58□□□□□ -2
UPF3A-207ENST00000481131 STARD9Q9P2P6 4700 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 TRAV12-2A0A075B6T6 113 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 A0A0D9SG52 128 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 A0A1B0GV50 99 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 A0A1W2PNN7 141 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 KANTRA0A1W2PQU2 76 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 A8MTW9 85 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 PFDN1O60925 122 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 PRM2P04554 102 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 NBEAP1P0C6P0 100 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 HIST1H1EP10412 219 aaKnown RBP2.57□□□□□ -2
UPF3A-207ENST00000481131 HRES1P13985 223 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 GNG5P63218 68 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 CD164Q04900 197 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 SPINK13Q1W4C9 94 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 ACOT6Q3I5F7 207 aaPredicted RBP2.57□□□□□ -2
UPF3A-207ENST00000481131 KHDC3LQ587J8 217 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 FAM74A1Q5RGS3 127 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 Q6ZQT7 251 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 IQCF2Q8IXL9 164 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 ZFP82Q8N141 532 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 OR8A1Q8NGG7 326 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 Q8TAT8 98 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 HYLS1Q96M11 299 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 SLC50A1Q9BRV3 221 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 PSMG3Q9BT73 122 aaPredicted RBP2.57□□□□□ -2
UPF3A-207ENST00000481131 UBR4Q5T4S7 5183 aa2.57□□□□□ -2
UPF3A-207ENST00000481131 TRAV8-1A0A0A6YYK1 113 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 CTXND1A0A1B0GTU2 59 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 MAP1LC3B2A6NCE7 125 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 PGPA6NDG6 321 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 GGTLC3B5MD39 225 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 M0QXV9 152 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 CRXO43186 299 aaPredicted RBP2.56□□□□□ -2
UPF3A-207ENST00000481131 GCHFRP30047 84 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 S100A7P31151 101 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 UBE2G2P60604 165 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 RANP62826 216 aaKnown RBP2.56□□□□□ -2
UPF3A-207ENST00000481131 SERF2P84101 59 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 PSG9Q00887 426 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 PDE6HQ13956 83 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 GUK1Q16774 197 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 AKR1C8PQ5T2L2 129 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 ZFAND6Q6FIF0 208 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 EBLN2Q6P2I7 272 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 S100A7AQ86SG5 101 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 C1orf158Q8N1D5 194 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 Q8NAQ8 132 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 OR11H2Q8NH07 326 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 FAM213BQ8TBF2 198 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 GNPNAT1Q96EK6 184 aaPredicted RBP2.56□□□□□ -2
UPF3A-207ENST00000481131 MAP1LC3BQ9GZQ8 125 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 TREM1Q9NP99 234 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 TENM2Q9NT68 2774 aa2.56□□□□□ -2
UPF3A-207ENST00000481131 LYSTQ99698 3801 aa2.55□□□□□ -2
UPF3A-207ENST00000481131 TRAV8-3A0A0A6YYJ7 113 aa2.55□□□□□ -2
UPF3A-207ENST00000481131 F6UZH7 168 aa2.55□□□□□ -2
UPF3A-207ENST00000481131 H3BQ85 93 aa2.55□□□□□ -2
UPF3A-207ENST00000481131 SLC25A5P05141 298 aaKnown RBP2.55□□□□□ -2
UPF3A-207ENST00000481131 TPT1P13693 172 aaKnown RBP2.55□□□□□ -2
UPF3A-207ENST00000481131 ATP5G3P48201 142 aa2.55□□□□□ -2
UPF3A-207ENST00000481131 TAS2R45P59539 299 aa2.55□□□□□ -2
UPF3A-207ENST00000481131 CCL20P78556 96 aa2.55□□□□□ -2
UPF3A-207ENST00000481131 PDZD11Q5EBL8 140 aa2.55□□□□□ -2
UPF3A-207ENST00000481131 SAMD13Q5VXD3 122 aa2.55□□□□□ -2
UPF3A-207ENST00000481131 ALKAL2Q6UX46 152 aa2.55□□□□□ -2
UPF3A-207ENST00000481131 ZNF705AQ6ZN79 300 aaPredicted RBP2.55□□□□□ -2
UPF3A-207ENST00000481131 GOLT1AQ6ZVE7 132 aa2.55□□□□□ -2
UPF3A-207ENST00000481131 ZNF767PQ75MW2 155 aa2.55□□□□□ -2
UPF3A-207ENST00000481131 AMN1Q8IY45 258 aa2.55□□□□□ -2
UPF3A-207ENST00000481131 STOML3Q8TAV4 291 aa2.55□□□□□ -2
UPF3A-207ENST00000481131 SUN5Q8TC36 379 aa2.55□□□□□ -2
UPF3A-207ENST00000481131 ANAPC13Q9BS18 74 aa2.55□□□□□ -2
UPF3A-207ENST00000481131 AGPAT4-IT1Q9H0P7 198 aa2.55□□□□□ -2
UPF3A-207ENST00000481131 OTORQ9NRC9 128 aa2.55□□□□□ -2
UPF3A-207ENST00000481131 TP53TG1Q9Y2A0 90 aa2.55□□□□□ -2
UPF3A-207ENST00000481131 MUC4Q99102 2169 aa2.54□□□□□ -2
UPF3A-207ENST00000481131 DYNC2H1Q8NCM8 4307 aaKnown RBP2.54□□□□□ -2
UPF3A-207ENST00000481131 TRAV12-3A0A0B4J271 114 aa2.54□□□□□ -2
UPF3A-207ENST00000481131 P0C880 135 aa2.54□□□□□ -2
UPF3A-207ENST00000481131 HTN1P15515 57 aa2.54□□□□□ -2
UPF3A-207ENST00000481131 RNASE4P34096 147 aaKnown RBP2.54□□□□□ -2
UPF3A-207ENST00000481131 SULT1A2P50226 295 aa2.54□□□□□ -2
UPF3A-207ENST00000481131 EMP1P54849 157 aa2.54□□□□□ -2
UPF3A-207ENST00000481131 OR10J3Q5JRS4 329 aa2.54□□□□□ -2
UPF3A-207ENST00000481131 TMEM78Q5T7P6 136 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms