RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 APOC3P02656 99 aa7.3□□□□□ -1.24
ATG4B-219ENST00000479941 S100PP25815 95 aa7.3□□□□□ -1.24
ATG4B-219ENST00000479941 CKS2P33552 79 aa7.3□□□□□ -1.24
ATG4B-219ENST00000479941 RPS10P46783 165 aaKnown RBP7.3□□□□□ -1.24
ATG4B-219ENST00000479941 Q8N3U1 123 aa7.3□□□□□ -1.24
ATG4B-219ENST00000479941 TMEM70Q9BUB7 260 aa7.3□□□□□ -1.24
ATG4B-219ENST00000479941 TRBV24-1A0A075B6N3 115 aa7.29□□□□□ -1.24
ATG4B-219ENST00000479941 PPBPP02775 128 aa7.29□□□□□ -1.24
ATG4B-219ENST00000479941 PMCHP20382 165 aa7.29□□□□□ -1.24
ATG4B-219ENST00000479941 AMTP48728 403 aa7.29□□□□□ -1.24
ATG4B-219ENST00000479941 POLR2KP53803 58 aaKnown RBP7.29□□□□□ -1.24
ATG4B-219ENST00000479941 Q6ZRN7 208 aaPredicted RBP7.29□□□□□ -1.24
ATG4B-219ENST00000479941 SVBPQ8N300 66 aa7.29□□□□□ -1.24
ATG4B-219ENST00000479941 NRACQ8N912 160 aa7.29□□□□□ -1.24
ATG4B-219ENST00000479941 TMEM243Q9BU79 118 aa7.29□□□□□ -1.24
ATG4B-219ENST00000479941 RPS10P5Q9NQ39 176 aa7.29□□□□□ -1.24
ATG4B-219ENST00000479941 TRAV8-3A0A0A6YYJ7 113 aa7.28□□□□□ -1.24
ATG4B-219ENST00000479941 TRBV27A0A0K0K1C4 114 aa7.28□□□□□ -1.24
ATG4B-219ENST00000479941 D6R8Y8 96 aa7.28□□□□□ -1.24
ATG4B-219ENST00000479941 VCYO14598 125 aa7.28□□□□□ -1.24
ATG4B-219ENST00000479941 UBE2L6O14933 153 aa7.28□□□□□ -1.24
ATG4B-219ENST00000479941 SNAPINO95295 136 aa7.28□□□□□ -1.24
ATG4B-219ENST00000479941 APCSP02743 223 aa7.28□□□□□ -1.24
ATG4B-219ENST00000479941 SUMO2P61956 95 aaKnown RBP7.28□□□□□ -1.24
ATG4B-219ENST00000479941 TNP2Q05952 138 aa7.28□□□□□ -1.24
ATG4B-219ENST00000479941 MPV17L2Q567V2 206 aa7.28□□□□□ -1.24
ATG4B-219ENST00000479941 ATRAIDQ6UW56 229 aa7.28□□□□□ -1.24
ATG4B-219ENST00000479941 C20orf78Q9BR46 151 aa7.28□□□□□ -1.24
ATG4B-219ENST00000479941 KLK12Q9UKR0 248 aa7.28□□□□□ -1.24
ATG4B-219ENST00000479941 LRP1BQ9NZR2 4599 aa7.27□□□□□ -1.25
ATG4B-219ENST00000479941 PHOX2AO14813 284 aa7.27□□□□□ -1.25
ATG4B-219ENST00000479941 TNFRSF6BO95407 300 aa7.27□□□□□ -1.25
ATG4B-219ENST00000479941 RBX1P62877 108 aa7.27□□□□□ -1.25
ATG4B-219ENST00000479941 GAGE6Q13070 117 aa7.27□□□□□ -1.25
ATG4B-219ENST00000479941 TMEM136Q6ZRR5 245 aa7.27□□□□□ -1.25
ATG4B-219ENST00000479941 ORMDL3Q8N138 153 aa7.27□□□□□ -1.25
ATG4B-219ENST00000479941 DEFB104AQ8WTQ1 72 aa7.27□□□□□ -1.25
ATG4B-219ENST00000479941 Q9HAA7 133 aa7.27□□□□□ -1.25
ATG4B-219ENST00000479941 A0A1B0GUV1 79 aa7.26□□□□□ -1.25
ATG4B-219ENST00000479941 A0A1B0GVY2 172 aa7.26□□□□□ -1.25
ATG4B-219ENST00000479941 H7C423 109 aa7.26□□□□□ -1.25
ATG4B-219ENST00000479941 ANGP03950 147 aaKnown RBP7.26□□□□□ -1.25
ATG4B-219ENST00000479941 RPL32P62910 135 aaKnown RBP7.26□□□□□ -1.25
ATG4B-219ENST00000479941 Q0VG73 95 aa7.26□□□□□ -1.25
ATG4B-219ENST00000479941 Q8N976 141 aa7.26□□□□□ -1.25
ATG4B-219ENST00000479941 UBE2WQ96B02 151 aa7.26□□□□□ -1.25
ATG4B-219ENST00000479941 RMI2Q96E14 147 aa7.26□□□□□ -1.25
ATG4B-219ENST00000479941 KIR2DL4Q99706 377 aa7.26□□□□□ -1.25
ATG4B-219ENST00000479941 TM2D2Q9BX73 214 aa7.26□□□□□ -1.25
ATG4B-219ENST00000479941 COX11Q9Y6N1 276 aa7.26□□□□□ -1.25
ATG4B-219ENST00000479941 TCAPO15273 167 aa7.25□□□□□ -1.25
ATG4B-219ENST00000479941 PSCAO43653 123 aa7.25□□□□□ -1.25
ATG4B-219ENST00000479941 TSHBP01222 138 aa7.25□□□□□ -1.25
ATG4B-219ENST00000479941 CRPP02741 224 aa7.25□□□□□ -1.25
ATG4B-219ENST00000479941 COX19Q49B96 90 aa7.25□□□□□ -1.25
ATG4B-219ENST00000479941 PRELID3AQ96N28 172 aa7.25□□□□□ -1.25
ATG4B-219ENST00000479941 LAMTOR2Q9Y2Q5 125 aa7.25□□□□□ -1.25
ATG4B-219ENST00000479941 NPYP01303 97 aa7.24□□□□□ -1.25
ATG4B-219ENST00000479941 ESDP10768 282 aa7.24□□□□□ -1.25
ATG4B-219ENST00000479941 FCER1GP30273 86 aa7.24□□□□□ -1.25
ATG4B-219ENST00000479941 SLC7A5P1Q8MH63 180 aa7.24□□□□□ -1.25
ATG4B-219ENST00000479941 SMIM2Q9BVW6 85 aa7.24□□□□□ -1.25
ATG4B-219ENST00000479941 GNB1LQ9BYB4 327 aa7.24□□□□□ -1.25
ATG4B-219ENST00000479941 PRR34Q9NV39 138 aa7.24□□□□□ -1.25
ATG4B-219ENST00000479941 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.23□□□□□ -1.25
ATG4B-219ENST00000479941 IGKV2-29A2NJV5 120 aaPredicted RBP7.23□□□□□ -1.25
ATG4B-219ENST00000479941 EREGO14944 169 aa7.23□□□□□ -1.25
ATG4B-219ENST00000479941 HLA-DQA1P01909 254 aa7.23□□□□□ -1.25
ATG4B-219ENST00000479941 MIAQ16674 131 aa7.23□□□□□ -1.25
ATG4B-219ENST00000479941 AMMECR1LQ6DCA0 310 aa7.23□□□□□ -1.25
ATG4B-219ENST00000479941 ENHOQ6UWT2 76 aa7.23□□□□□ -1.25
ATG4B-219ENST00000479941 LINC00269Q8N2A0 174 aa7.23□□□□□ -1.25
ATG4B-219ENST00000479941 C20orf203Q8NBC4 194 aa7.23□□□□□ -1.25
ATG4B-219ENST00000479941 KIAA1109Q2LD37 5005 aa7.22□□□□□ -1.25
ATG4B-219ENST00000479941 IGLV4-60A0A075B6I1 120 aa7.22□□□□□ -1.25
ATG4B-219ENST00000479941 IGKV2D-24A0A075B6R9 120 aa7.22□□□□□ -1.25
ATG4B-219ENST00000479941 PRSS47A8MTI9 375 aa7.22□□□□□ -1.25
ATG4B-219ENST00000479941 MT-ND6P03923 174 aa7.22□□□□□ -1.25
ATG4B-219ENST00000479941 FGF6P10767 208 aa7.22□□□□□ -1.25
ATG4B-219ENST00000479941 ZNF25P17030 456 aaPredicted RBP7.22□□□□□ -1.25
ATG4B-219ENST00000479941 REG3AQ06141 175 aa7.22□□□□□ -1.25
ATG4B-219ENST00000479941 SMAGPQ0VAQ4 97 aa7.22□□□□□ -1.25
ATG4B-219ENST00000479941 RNASEKQ6P5S7 137 aaKnown RBP7.22□□□□□ -1.25
ATG4B-219ENST00000479941 C1orf43Q9BWL3 253 aa7.22□□□□□ -1.25
ATG4B-219ENST00000479941 A0A087WTM6 91 aa7.21□□□□□ -1.26
ATG4B-219ENST00000479941 MRPL52Q86TS9 123 aaKnown RBP7.21□□□□□ -1.26
ATG4B-219ENST00000479941 TMEM18Q96B42 140 aa7.21□□□□□ -1.26
ATG4B-219ENST00000479941 TMEM101Q96IK0 257 aa7.21□□□□□ -1.26
ATG4B-219ENST00000479941 MAP1LC3AQ9H492 121 aa7.21□□□□□ -1.26
ATG4B-219ENST00000479941 TRAV8-4A0A0B4J246 113 aa7.2□□□□□ -1.26
ATG4B-219ENST00000479941 RAB5AP20339 215 aa7.2□□□□□ -1.26
ATG4B-219ENST00000479941 CLPSL2Q6UWE3 100 aa7.2□□□□□ -1.26
ATG4B-219ENST00000479941 RYR1P21817 5038 aa7.2□□□□□ -1.26
ATG4B-219ENST00000479941 TGIF2-C20orf24A0A0A6YYL0 155 aa7.19□□□□□ -1.26
ATG4B-219ENST00000479941 LOC389332A0A1B0GUA5 103 aa7.19□□□□□ -1.26
ATG4B-219ENST00000479941 LRCOL1A6NCL2 159 aa7.19□□□□□ -1.26
ATG4B-219ENST00000479941 KIAA1644Q3SXP7 199 aa7.19□□□□□ -1.26
ATG4B-219ENST00000479941 SPATA12Q7Z6I5 190 aa7.19□□□□□ -1.26
ATG4B-219ENST00000479941 OR5A1Q8NGJ0 315 aa7.19□□□□□ -1.26
ATG4B-219ENST00000479941 CSDC2Q9Y534 153 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms