RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ZNF56Q15929 161 aa4.29□□□□□ -1.72
SPTLC1-205ENST00000477888 PYDC2Q56P42 97 aa4.29□□□□□ -1.72
SPTLC1-205ENST00000477888 CHCHD10Q8WYQ3 142 aaPredicted RBP4.29□□□□□ -1.72
SPTLC1-205ENST00000477888 CARD19Q96LW7 228 aa4.29□□□□□ -1.72
SPTLC1-205ENST00000477888 MRPS26Q9BYN8 205 aaKnown RBP4.29□□□□□ -1.72
SPTLC1-205ENST00000477888 KRTAP4-1Q9BYQ7 146 aa4.29□□□□□ -1.72
SPTLC1-205ENST00000477888 RPP21Q9H633 154 aaKnown RBP4.29□□□□□ -1.72
SPTLC1-205ENST00000477888 A0A087WZ39 114 aa4.28□□□□□ -1.72
SPTLC1-205ENST00000477888 CRYGAP11844 174 aa4.28□□□□□ -1.72
SPTLC1-205ENST00000477888 TMBIM6P55061 237 aa4.28□□□□□ -1.72
SPTLC1-205ENST00000477888 EIF5AP63241 154 aaKnown RBP4.28□□□□□ -1.72
SPTLC1-205ENST00000477888 SYCNQ0VAF6 134 aa4.28□□□□□ -1.72
SPTLC1-205ENST00000477888 CD164L2Q6UWJ8 174 aa4.28□□□□□ -1.72
SPTLC1-205ENST00000477888 SDHCQ99643 169 aaPredicted RBP4.28□□□□□ -1.72
SPTLC1-205ENST00000477888 RETNLBQ9BQ08 111 aa4.28□□□□□ -1.72
SPTLC1-205ENST00000477888 TMEM243Q9BU79 118 aa4.28□□□□□ -1.72
SPTLC1-205ENST00000477888 EPDR1Q9UM22 224 aa4.28□□□□□ -1.72
SPTLC1-205ENST00000477888 ARL2-SNX15V9GYD0 113 aa4.28□□□□□ -1.72
SPTLC1-205ENST00000477888 LOC107984640A0A0U1RRK4 108 aa4.27□□□□□ -1.73
SPTLC1-205ENST00000477888 ATP6V1G2O95670 118 aa4.27□□□□□ -1.73
SPTLC1-205ENST00000477888 RPL12P30050 165 aaKnown RBP4.27□□□□□ -1.73
SPTLC1-205ENST00000477888 PAPPA-AS1Q5QFB9 102 aa4.27□□□□□ -1.73
SPTLC1-205ENST00000477888 Q75L30 129 aa4.27□□□□□ -1.73
SPTLC1-205ENST00000477888 COX8CQ7Z4L0 72 aa4.27□□□□□ -1.73
SPTLC1-205ENST00000477888 RBM38Q9H0Z9 239 aaKnown RBP4.27□□□□□ -1.73
SPTLC1-205ENST00000477888 V9GYH0 126 aa4.27□□□□□ -1.73
SPTLC1-205ENST00000477888 IGLV7-46A0A075B6I9 117 aa4.26□□□□□ -1.73
SPTLC1-205ENST00000477888 IGKV3OR2-268A0A0C4DH90 116 aa4.26□□□□□ -1.73
SPTLC1-205ENST00000477888 A0A0U1RRA0 63 aa4.26□□□□□ -1.73
SPTLC1-205ENST00000477888 NAP1L6A6NFF2 107 aa4.26□□□□□ -1.73
SPTLC1-205ENST00000477888 H3BMQ9 156 aa4.26□□□□□ -1.73
SPTLC1-205ENST00000477888 HMGB3O15347 200 aaKnown RBP4.26□□□□□ -1.73
SPTLC1-205ENST00000477888 SH2D1AO60880 128 aa4.26□□□□□ -1.73
SPTLC1-205ENST00000477888 FGF6P10767 208 aa4.26□□□□□ -1.73
SPTLC1-205ENST00000477888 A0A087X002 238 aa4.25□□□□□ -1.73
SPTLC1-205ENST00000477888 TMSB15BA0A087X1C1 80 aa4.25□□□□□ -1.73
SPTLC1-205ENST00000477888 IGHV1-58A0A0C4DH39 117 aa4.25□□□□□ -1.73
SPTLC1-205ENST00000477888 A0A1W2PPV4 95 aa4.25□□□□□ -1.73
SPTLC1-205ENST00000477888 M0QY20 66 aa4.25□□□□□ -1.73
SPTLC1-205ENST00000477888 ARL14EPLP0DKL9 152 aa4.25□□□□□ -1.73
SPTLC1-205ENST00000477888 BCL2P10415 239 aa4.25□□□□□ -1.73
SPTLC1-205ENST00000477888 BTCP35070 178 aa4.25□□□□□ -1.73
SPTLC1-205ENST00000477888 ASB16-AS1Q495Z4 193 aa4.25□□□□□ -1.73
SPTLC1-205ENST00000477888 OR10AG1Q8NH19 301 aa4.25□□□□□ -1.73
SPTLC1-205ENST00000477888 ZNF471Q9BX82 626 aaPredicted RBP4.25□□□□□ -1.73
SPTLC1-205ENST00000477888 MED28Q9H204 178 aa4.25□□□□□ -1.73
SPTLC1-205ENST00000477888 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.24□□□□□ -1.73
SPTLC1-205ENST00000477888 MT1HP80294 61 aa4.24□□□□□ -1.73
SPTLC1-205ENST00000477888 MEF2BQ02080 365 aaPredicted RBP4.24□□□□□ -1.73
SPTLC1-205ENST00000477888 FAM162BQ5T6X4 162 aa4.24□□□□□ -1.73
SPTLC1-205ENST00000477888 NUP35Q8NFH5 326 aa4.24□□□□□ -1.73
SPTLC1-205ENST00000477888 PGLYRP4Q96LB8 373 aa4.24□□□□□ -1.73
SPTLC1-205ENST00000477888 VCX2Q9H322 139 aa4.24□□□□□ -1.73
SPTLC1-205ENST00000477888 UBE2L6O14933 153 aa4.23□□□□□ -1.73
SPTLC1-205ENST00000477888 APOMO95445 188 aa4.23□□□□□ -1.73
SPTLC1-205ENST00000477888 CFC1BP0CG36 223 aa4.23□□□□□ -1.73
SPTLC1-205ENST00000477888 STAG3L2P0CL84 134 aa4.23□□□□□ -1.73
SPTLC1-205ENST00000477888 STAG3L3P0CL85 134 aa4.23□□□□□ -1.73
SPTLC1-205ENST00000477888 GCHFRP30047 84 aa4.23□□□□□ -1.73
SPTLC1-205ENST00000477888 Q86TA4 180 aa4.23□□□□□ -1.73
SPTLC1-205ENST00000477888 IGLV4-69A0A075B6H9 119 aa4.22□□□□□ -1.73
SPTLC1-205ENST00000477888 MUC21A0A140T8X8 626 aa4.22□□□□□ -1.73
SPTLC1-205ENST00000477888 FAM168BA1KXE4 195 aa4.22□□□□□ -1.73
SPTLC1-205ENST00000477888 XKRY2A2RUG3 117 aa4.22□□□□□ -1.73
SPTLC1-205ENST00000477888 SNAI2O43623 268 aa4.22□□□□□ -1.73
SPTLC1-205ENST00000477888 XCL1P47992 114 aa4.22□□□□□ -1.73
SPTLC1-205ENST00000477888 NKX2-5P52952 324 aaPredicted RBP4.22□□□□□ -1.73
SPTLC1-205ENST00000477888 HERV-K104P63124 156 aa4.22□□□□□ -1.73
SPTLC1-205ENST00000477888 CNPY1Q3B7I2 92 aa4.22□□□□□ -1.73
SPTLC1-205ENST00000477888 KRTAP19-2Q3LHN2 52 aa4.22□□□□□ -1.73
SPTLC1-205ENST00000477888 KRTAP7-1Q8IUC3 87 aa4.22□□□□□ -1.73
SPTLC1-205ENST00000477888 TYMSOSQ8TAI1 123 aa4.22□□□□□ -1.73
SPTLC1-205ENST00000477888 TSKUQ8WUA8 353 aa4.22□□□□□ -1.73
SPTLC1-205ENST00000477888 ISOC2Q96AB3 205 aa4.22□□□□□ -1.73
SPTLC1-205ENST00000477888 SEC22CQ9BRL7 303 aa4.22□□□□□ -1.73
SPTLC1-205ENST00000477888 ALKBH7Q9BT30 221 aaPredicted RBP4.22□□□□□ -1.73
SPTLC1-205ENST00000477888 PPDPFQ9H3Y8 114 aa4.22□□□□□ -1.73
SPTLC1-205ENST00000477888 ZFP30Q9Y2G7 519 aa4.22□□□□□ -1.73
SPTLC1-205ENST00000477888 LINC00959A0A1B0GUT2 108 aa4.21□□□□□ -1.74
SPTLC1-205ENST00000477888 A0A1W2PRE2 83 aa4.21□□□□□ -1.74
SPTLC1-205ENST00000477888 H0Y8G0 127 aa4.21□□□□□ -1.74
SPTLC1-205ENST00000477888 ZNF861PO60384 105 aa4.21□□□□□ -1.74
SPTLC1-205ENST00000477888 OR5AL1P0C617 328 aa4.21□□□□□ -1.74
SPTLC1-205ENST00000477888 TAGLN2P37802 199 aaKnown RBP4.21□□□□□ -1.74
SPTLC1-205ENST00000477888 KRTAP10-6P60371 365 aaPredicted RBP4.21□□□□□ -1.74
SPTLC1-205ENST00000477888 RPL18AQ02543 176 aaKnown RBP4.21□□□□□ -1.74
SPTLC1-205ENST00000477888 SPANXN1Q5VSR9 72 aa4.21□□□□□ -1.74
SPTLC1-205ENST00000477888 LINC00173Q6ZV60 143 aa4.21□□□□□ -1.74
SPTLC1-205ENST00000477888 ERASQ7Z444 233 aa4.21□□□□□ -1.74
SPTLC1-205ENST00000477888 OR5A1Q8NGJ0 315 aa4.21□□□□□ -1.74
SPTLC1-205ENST00000477888 SCGB1C1Q8TD33 95 aa4.21□□□□□ -1.74
SPTLC1-205ENST00000477888 PEX7O00628 323 aa4.2□□□□□ -1.74
SPTLC1-205ENST00000477888 CCL25O15444 150 aa4.2□□□□□ -1.74
SPTLC1-205ENST00000477888 CXCL1P09341 107 aa4.2□□□□□ -1.74
SPTLC1-205ENST00000477888 SMIM17P0DL12 118 aa4.2□□□□□ -1.74
SPTLC1-205ENST00000477888 CDC34P49427 236 aaPredicted RBP4.2□□□□□ -1.74
SPTLC1-205ENST00000477888 DEFA3P59666 94 aa4.2□□□□□ -1.74
SPTLC1-205ENST00000477888 EIF5AL1Q6IS14 154 aaKnown RBP4.2□□□□□ -1.74
SPTLC1-205ENST00000477888 OPRPNQ99935 248 aaPredicted RBP4.2□□□□□ -1.74
SPTLC1-205ENST00000477888 WFDC1Q9HC57 220 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms