RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 TRGC2P03986 189 aa7.95□□□□□ -1.14
LSM2-212ENST00000477182 LINC00694P0DN24 101 aa7.95□□□□□ -1.14
LSM2-212ENST00000477182 SRIP30626 198 aa7.95□□□□□ -1.14
LSM2-212ENST00000477182 MRPL23Q16540 153 aaKnown RBP7.95□□□□□ -1.14
LSM2-212ENST00000477182 C6orf223Q8N319 242 aa7.95□□□□□ -1.14
LSM2-212ENST00000477182 C15orf53Q8NAA6 179 aa7.95□□□□□ -1.14
LSM2-212ENST00000477182 ST20Q9HBF5 79 aa7.95□□□□□ -1.14
LSM2-212ENST00000477182 IGHV3-38A0A0C4DH36 116 aa7.94□□□□□ -1.14
LSM2-212ENST00000477182 TRBV6-5A0A0K0K1A5 114 aa7.94□□□□□ -1.14
LSM2-212ENST00000477182 PPP1R17O96001 155 aa7.94□□□□□ -1.14
LSM2-212ENST00000477182 UBE2D3P61077 147 aa7.94□□□□□ -1.14
LSM2-212ENST00000477182 UBE2D2P62837 147 aa7.94□□□□□ -1.14
LSM2-212ENST00000477182 ALKBH7Q9BT30 221 aaPredicted RBP7.94□□□□□ -1.14
LSM2-212ENST00000477182 SDHAF1A6NFY7 115 aa7.93□□□□□ -1.14
LSM2-212ENST00000477182 PHOX2AO14813 284 aa7.93□□□□□ -1.14
LSM2-212ENST00000477182 SUMO2P61956 95 aaKnown RBP7.93□□□□□ -1.14
LSM2-212ENST00000477182 NEGR1Q7Z3B1 354 aa7.93□□□□□ -1.14
LSM2-212ENST00000477182 ATP6V0E2Q8NHE4 81 aa7.93□□□□□ -1.14
LSM2-212ENST00000477182 DEFB104AQ8WTQ1 72 aa7.93□□□□□ -1.14
LSM2-212ENST00000477182 TMEM70Q9BUB7 260 aa7.93□□□□□ -1.14
LSM2-212ENST00000477182 LAMTOR2Q9Y2Q5 125 aa7.93□□□□□ -1.14
LSM2-212ENST00000477182 FLG2Q5D862 2391 aaPredicted RBP7.92□□□□□ -1.14
LSM2-212ENST00000477182 LOC389332A0A1B0GUA5 103 aa7.92□□□□□ -1.14
LSM2-212ENST00000477182 J3QL48 77 aa7.92□□□□□ -1.14
LSM2-212ENST00000477182 POLR2KP53803 58 aaKnown RBP7.92□□□□□ -1.14
LSM2-212ENST00000477182 Q5VSD8 79 aa7.92□□□□□ -1.14
LSM2-212ENST00000477182 SH2D6Q7Z4S9 175 aa7.92□□□□□ -1.14
LSM2-212ENST00000477182 C20orf78Q9BR46 151 aa7.92□□□□□ -1.14
LSM2-212ENST00000477182 MAP1LC3AQ9H492 121 aa7.92□□□□□ -1.14
LSM2-212ENST00000477182 NBDYA0A0U1RRE5 68 aa7.91□□□□□ -1.14
LSM2-212ENST00000477182 DAZ4Q86SG3 579 aaKnown RBP7.91□□□□□ -1.14
LSM2-212ENST00000477182 SMIM2Q9BVW6 85 aa7.91□□□□□ -1.14
LSM2-212ENST00000477182 DAZ3Q9NR90 486 aaKnown RBP7.91□□□□□ -1.14
LSM2-212ENST00000477182 VCYO14598 125 aa7.9□□□□□ -1.14
LSM2-212ENST00000477182 PMCHP20382 165 aa7.9□□□□□ -1.14
LSM2-212ENST00000477182 RPL32P62910 135 aaKnown RBP7.9□□□□□ -1.14
LSM2-212ENST00000477182 IQCJQ1A5X6 159 aa7.9□□□□□ -1.14
LSM2-212ENST00000477182 C18orf32Q8TCD1 76 aa7.9□□□□□ -1.14
LSM2-212ENST00000477182 GTSF1LQ9H1H1 148 aa7.9□□□□□ -1.14
LSM2-212ENST00000477182 TRBV27A0A0K0K1C4 114 aa7.89□□□□□ -1.15
LSM2-212ENST00000477182 PRSS47A8MTI9 375 aa7.89□□□□□ -1.15
LSM2-212ENST00000477182 I3L3M4 83 aa7.89□□□□□ -1.15
LSM2-212ENST00000477182 TSHBP01222 138 aa7.89□□□□□ -1.15
LSM2-212ENST00000477182 IFI27P40305 119 aaPredicted RBP7.89□□□□□ -1.15
LSM2-212ENST00000477182 COTL1Q14019 142 aa7.89□□□□□ -1.15
LSM2-212ENST00000477182 ESRGQ1W209 222 aa7.89□□□□□ -1.15
LSM2-212ENST00000477182 LYPD5Q6UWN5 251 aa7.89□□□□□ -1.15
LSM2-212ENST00000477182 VPS13BQ7Z7G8 4022 aa7.88□□□□□ -1.15
LSM2-212ENST00000477182 NTM-AS1Q6ZSK4 140 aa7.88□□□□□ -1.15
LSM2-212ENST00000477182 Q8N8P6 123 aa7.88□□□□□ -1.15
LSM2-212ENST00000477182 PRSS3P2Q8NHM4 247 aa7.88□□□□□ -1.15
LSM2-212ENST00000477182 KIR2DL4Q99706 377 aa7.88□□□□□ -1.15
LSM2-212ENST00000477182 FAT1Q14517 4588 aa7.87□□□□□ -1.15
LSM2-212ENST00000477182 TRBV6-8A0A0A6YYG3 113 aa7.87□□□□□ -1.15
LSM2-212ENST00000477182 C1orf196B1AJZ1 125 aa7.87□□□□□ -1.15
LSM2-212ENST00000477182 TCAPO15273 167 aa7.87□□□□□ -1.15
LSM2-212ENST00000477182 FCER1GP30273 86 aa7.87□□□□□ -1.15
LSM2-212ENST00000477182 TIRAPP58753 221 aa7.87□□□□□ -1.15
LSM2-212ENST00000477182 KRTAP10-2P60368 255 aa7.87□□□□□ -1.15
LSM2-212ENST00000477182 SERTAD4-AS1Q5TG53 156 aa7.87□□□□□ -1.15
LSM2-212ENST00000477182 NXT2Q9NPJ8 142 aaKnown RBP7.87□□□□□ -1.15
LSM2-212ENST00000477182 TRBV25-1A0A075B6N4 114 aa7.86□□□□□ -1.15
LSM2-212ENST00000477182 IGHV1-24A0A0C4DH33 117 aa7.86□□□□□ -1.15
LSM2-212ENST00000477182 HIST1H2BKO60814 126 aa7.86□□□□□ -1.15
LSM2-212ENST00000477182 HIST1H2BJP06899 126 aa7.86□□□□□ -1.15
LSM2-212ENST00000477182 BTF3P20290 206 aaKnown RBP7.86□□□□□ -1.15
LSM2-212ENST00000477182 HIST1H2BOP23527 126 aa7.86□□□□□ -1.15
LSM2-212ENST00000477182 HIST1H2BBP33778 126 aa7.86□□□□□ -1.15
LSM2-212ENST00000477182 AMTP48728 403 aa7.86□□□□□ -1.15
LSM2-212ENST00000477182 CCL18P55774 89 aa7.86□□□□□ -1.15
LSM2-212ENST00000477182 HIST1H2BDP58876 126 aa7.86□□□□□ -1.15
LSM2-212ENST00000477182 HIST1H2BCP62807 126 aa7.86□□□□□ -1.15
LSM2-212ENST00000477182 HIST2H2BEQ16778 126 aa7.86□□□□□ -1.15
LSM2-212ENST00000477182 TMEM97Q5BJF2 176 aa7.86□□□□□ -1.15
LSM2-212ENST00000477182 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.86□□□□□ -1.15
LSM2-212ENST00000477182 LELP1Q5T871 98 aa7.86□□□□□ -1.15
LSM2-212ENST00000477182 LCE2DQ5TA82 110 aaPredicted RBP7.86□□□□□ -1.15
LSM2-212ENST00000477182 FA2HQ7L5A8 372 aa7.86□□□□□ -1.15
LSM2-212ENST00000477182 HIST1H2BHQ93079 126 aa7.86□□□□□ -1.15
LSM2-212ENST00000477182 HIST1H2BNQ99877 126 aa7.86□□□□□ -1.15
LSM2-212ENST00000477182 HIST1H2BMQ99879 126 aa7.86□□□□□ -1.15
LSM2-212ENST00000477182 LINC00588Q9Y4M8 146 aa7.86□□□□□ -1.15
LSM2-212ENST00000477182 Q0VG73 95 aa7.85□□□□□ -1.15
LSM2-212ENST00000477182 NIT1Q86X76 327 aa7.85□□□□□ -1.15
LSM2-212ENST00000477182 BAGE3Q86Y29 109 aa7.85□□□□□ -1.15
LSM2-212ENST00000477182 URB1-AS1Q96HZ7 61 aa7.85□□□□□ -1.15
LSM2-212ENST00000477182 TMEM243Q9BU79 118 aa7.85□□□□□ -1.15
LSM2-212ENST00000477182 MRPS16Q9Y3D3 137 aaKnown RBP7.85□□□□□ -1.15
LSM2-212ENST00000477182 TRAV8-6A0A0B4J262 113 aa7.84□□□□□ -1.15
LSM2-212ENST00000477182 XGP55808 180 aa7.84□□□□□ -1.15
LSM2-212ENST00000477182 RNASEKQ6P5S7 137 aaKnown RBP7.84□□□□□ -1.15
LSM2-212ENST00000477182 CHCHD5Q9BSY4 110 aa7.84□□□□□ -1.15
LSM2-212ENST00000477182 CHCHD7Q9BUK0 85 aa7.84□□□□□ -1.15
LSM2-212ENST00000477182 HMCN2Q8NDA2 5059 aa7.84□□□□□ -1.16
LSM2-212ENST00000477182 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.83□□□□□ -1.16
LSM2-212ENST00000477182 IGKV2-29A2NJV5 120 aaPredicted RBP7.83□□□□□ -1.16
LSM2-212ENST00000477182 LINC01546A6NGU7 62 aa7.83□□□□□ -1.16
LSM2-212ENST00000477182 FAM229AH3BQW9 127 aa7.83□□□□□ -1.16
LSM2-212ENST00000477182 LINC00614P0C842 121 aa7.83□□□□□ -1.16
LSM2-212ENST00000477182 ESDP10768 282 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms