RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 CLPSL2Q6UWE3 100 aa13.9□□□□□ -0.18
LIME1-204ENST00000476183 LINC00269Q8N2A0 174 aa13.9□□□□□ -0.18
LIME1-204ENST00000476183 FRZBQ92765 325 aa13.9□□□□□ -0.18
LIME1-204ENST00000476183 TMEM243Q9BU79 118 aa13.9□□□□□ -0.18
LIME1-204ENST00000476183 C20orf203Q8NBC4 194 aa13.89□□□□□ -0.19
LIME1-204ENST00000476183 FAM30AQ9NZY2 134 aa13.89□□□□□ -0.19
LIME1-204ENST00000476183 VPS13BQ7Z7G8 4022 aa13.88□□□□□ -0.19
LIME1-204ENST00000476183 A0A1B0GUT8 65 aa13.88□□□□□ -0.19
LIME1-204ENST00000476183 FAM231BA6NCW3 169 aa13.88□□□□□ -0.19
LIME1-204ENST00000476183 COTL1Q14019 142 aa13.88□□□□□ -0.19
LIME1-204ENST00000476183 PEA15Q15121 130 aa13.88□□□□□ -0.19
LIME1-204ENST00000476183 MIAQ16674 131 aa13.88□□□□□ -0.19
LIME1-204ENST00000476183 IGLV4-60A0A075B6I1 120 aa13.87□□□□□ -0.19
LIME1-204ENST00000476183 GAS8-AS1O95177 125 aa13.87□□□□□ -0.19
LIME1-204ENST00000476183 BORCS7Q96B45 105 aa13.87□□□□□ -0.19
LIME1-204ENST00000476183 TMEM70Q9BUB7 260 aa13.87□□□□□ -0.19
LIME1-204ENST00000476183 NAT8Q9UHE5 227 aa13.87□□□□□ -0.19
LIME1-204ENST00000476183 AMTP48728 403 aa13.86□□□□□ -0.19
LIME1-204ENST00000476183 ADIRFQ15847 76 aa13.86□□□□□ -0.19
LIME1-204ENST00000476183 KRTAP26-1Q6PEX3 210 aa13.86□□□□□ -0.19
LIME1-204ENST00000476183 A0A1B0GUV1 79 aa13.85□□□□□ -0.19
LIME1-204ENST00000476183 LINC01620Q4KN68 170 aa13.85□□□□□ -0.19
LIME1-204ENST00000476183 NUP35Q8NFH5 326 aa13.85□□□□□ -0.19
LIME1-204ENST00000476183 RNF185Q96GF1 192 aa13.85□□□□□ -0.19
LIME1-204ENST00000476183 TMEM191AQ9H0A3 160 aa13.85□□□□□ -0.19
LIME1-204ENST00000476183 SMDT1Q9H4I9 107 aa13.85□□□□□ -0.19
LIME1-204ENST00000476183 SDHAF1A6NFY7 115 aa13.84□□□□□ -0.19
LIME1-204ENST00000476183 HLA-DQA1P01909 254 aa13.84□□□□□ -0.19
LIME1-204ENST00000476183 REG3AQ06141 175 aa13.84□□□□□ -0.19
LIME1-204ENST00000476183 TRBV6-5A0A0K0K1A5 114 aa13.82□□□□□ -0.2
LIME1-204ENST00000476183 EPM2AB3EWF7 344 aa13.82□□□□□ -0.2
LIME1-204ENST00000476183 USP17L23D6RBM5 183 aa13.82□□□□□ -0.2
LIME1-204ENST00000476183 UBE2L6O14933 153 aa13.82□□□□□ -0.2
LIME1-204ENST00000476183 SMR3BP02814 79 aaPredicted RBP13.82□□□□□ -0.2
LIME1-204ENST00000476183 RAB4AP20338 218 aa13.82□□□□□ -0.2
LIME1-204ENST00000476183 AMN1Q8IY45 258 aa13.82□□□□□ -0.2
LIME1-204ENST00000476183 IGLV10-54A0A075B6I4 117 aa13.81□□□□□ -0.2
LIME1-204ENST00000476183 RPS10P46783 165 aaKnown RBP13.81□□□□□ -0.2
LIME1-204ENST00000476183 Q6ZSA8 131 aa13.81□□□□□ -0.2
LIME1-204ENST00000476183 NCR2O95944 276 aa13.8□□□□□ -0.2
LIME1-204ENST00000476183 RIGQ13278 110 aa13.8□□□□□ -0.2
LIME1-204ENST00000476183 NAT8BQ9UHF3 227 aa13.8□□□□□ -0.2
LIME1-204ENST00000476183 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.79□□□□□ -0.2
LIME1-204ENST00000476183 SMIM27A0A1W2PRY6 76 aa13.79□□□□□ -0.2
LIME1-204ENST00000476183 IGKV2-29A2NJV5 120 aaPredicted RBP13.79□□□□□ -0.2
LIME1-204ENST00000476183 C14orf177Q52M58 125 aa13.79□□□□□ -0.2
LIME1-204ENST00000476183 Q5VSD8 79 aa13.79□□□□□ -0.2
LIME1-204ENST00000476183 SMKR1H3BMG3 65 aa13.78□□□□□ -0.2
LIME1-204ENST00000476183 I3L3M4 83 aa13.78□□□□□ -0.2
LIME1-204ENST00000476183 APCSP02743 223 aa13.78□□□□□ -0.2
LIME1-204ENST00000476183 MRAP2Q96G30 205 aa13.78□□□□□ -0.2
LIME1-204ENST00000476183 ST20Q9HBF5 79 aa13.78□□□□□ -0.2
LIME1-204ENST00000476183 PRSS1P07477 247 aa13.77□□□□□ -0.21
LIME1-204ENST00000476183 PMCHP20382 165 aa13.77□□□□□ -0.21
LIME1-204ENST00000476183 SRRM2Q9UQ35 2752 aaKnown RBP13.77□□□□□ -0.21
LIME1-204ENST00000476183 TRAV8-4A0A0B4J246 113 aa13.76□□□□□ -0.21
LIME1-204ENST00000476183 TSHBP01222 138 aa13.76□□□□□ -0.21
LIME1-204ENST00000476183 POLR2KP53803 58 aaKnown RBP13.76□□□□□ -0.21
LIME1-204ENST00000476183 TMEM242Q9NWH2 141 aa13.75□□□□□ -0.21
LIME1-204ENST00000476183 H7C423 109 aa13.74□□□□□ -0.21
LIME1-204ENST00000476183 FGF6P10767 208 aa13.74□□□□□ -0.21
LIME1-204ENST00000476183 ESDP10768 282 aa13.74□□□□□ -0.21
LIME1-204ENST00000476183 AMMECR1LQ6DCA0 310 aa13.74□□□□□ -0.21
LIME1-204ENST00000476183 NRACQ8N912 160 aa13.74□□□□□ -0.21
LIME1-204ENST00000476183 TRBV27A0A0K0K1C4 114 aa13.73□□□□□ -0.21
LIME1-204ENST00000476183 CAMPP49913 170 aa13.73□□□□□ -0.21
LIME1-204ENST00000476183 FAM104BQ5XKR9 115 aa13.73□□□□□ -0.21
LIME1-204ENST00000476183 RNASEKQ6P5S7 137 aaKnown RBP13.73□□□□□ -0.21
LIME1-204ENST00000476183 IGKV3OR2-268A0A0C4DH90 116 aa13.72□□□□□ -0.21
LIME1-204ENST00000476183 MRPL51Q4U2R6 128 aaKnown RBP13.72□□□□□ -0.21
LIME1-204ENST00000476183 RAB14P61106 215 aa13.7□□□□□ -0.22
LIME1-204ENST00000476183 MRPL54Q6P161 138 aaKnown RBP13.7□□□□□ -0.22
LIME1-204ENST00000476183 SCXQ7RTU7 201 aa13.7□□□□□ -0.22
LIME1-204ENST00000476183 A0A1B0GW15 77 aa13.69□□□□□ -0.22
LIME1-204ENST00000476183 A0A1B0GXF2 115 aa13.68□□□□□ -0.22
LIME1-204ENST00000476183 GAGE12HA6NDE8 117 aa13.68□□□□□ -0.22
LIME1-204ENST00000476183 FAM229AH3BQW9 127 aa13.68□□□□□ -0.22
LIME1-204ENST00000476183 VCYO14598 125 aa13.68□□□□□ -0.22
LIME1-204ENST00000476183 INAFM2P0DMQ5 153 aa13.68□□□□□ -0.22
LIME1-204ENST00000476183 ZNF25P17030 456 aaPredicted RBP13.68□□□□□ -0.22
LIME1-204ENST00000476183 SUMO2P61956 95 aaKnown RBP13.68□□□□□ -0.22
LIME1-204ENST00000476183 DGAT2L7PQ6IED9 249 aa13.68□□□□□ -0.22
LIME1-204ENST00000476183 CLRN3Q8NCR9 226 aa13.68□□□□□ -0.22
LIME1-204ENST00000476183 FLG2Q5D862 2391 aaPredicted RBP13.67□□□□□ -0.22
LIME1-204ENST00000476183 MYCBP2O75592 4640 aa13.67□□□□□ -0.22
LIME1-204ENST00000476183 PPP1R17O96001 155 aa13.67□□□□□ -0.22
LIME1-204ENST00000476183 C9orf163Q8N9P6 203 aa13.67□□□□□ -0.22
LIME1-204ENST00000476183 CHCHD10Q8WYQ3 142 aaPredicted RBP13.67□□□□□ -0.22
LIME1-204ENST00000476183 CHAC1Q9BUX1 264 aa13.67□□□□□ -0.22
LIME1-204ENST00000476183 hDV102S1A0JD36 115 aa13.66□□□□□ -0.22
LIME1-204ENST00000476183 HBBP68871 147 aa13.66□□□□□ -0.22
LIME1-204ENST00000476183 C7orf77A4D0Y5 90 aa13.65□□□□□ -0.22
LIME1-204ENST00000476183 SLPIP03973 132 aa13.65□□□□□ -0.22
LIME1-204ENST00000476183 CLLU1Q5K131 121 aa13.65□□□□□ -0.22
LIME1-204ENST00000476183 MRPL52Q86TS9 123 aaKnown RBP13.65□□□□□ -0.22
LIME1-204ENST00000476183 C15orf56Q8N910 161 aa13.65□□□□□ -0.22
LIME1-204ENST00000476183 OR5A1Q8NGJ0 315 aa13.65□□□□□ -0.22
LIME1-204ENST00000476183 CIRBP-AS1Q8TBR5 109 aa13.65□□□□□ -0.22
LIME1-204ENST00000476183 TMEM101Q96IK0 257 aa13.65□□□□□ -0.22
LIME1-204ENST00000476183 BTF3L4Q96K17 158 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms