RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 IGHV3-30-3P0DP02 117 aa11.36□□□□□ -0.59
SCAF11-206ENST00000474828 IGHV3-30-5P0DP03 117 aa11.36□□□□□ -0.59
SCAF11-206ENST00000474828 COTL1Q14019 142 aa11.36□□□□□ -0.59
SCAF11-206ENST00000474828 C20orf78Q9BR46 151 aa11.36□□□□□ -0.59
SCAF11-206ENST00000474828 ST20Q9HBF5 79 aa11.36□□□□□ -0.59
SCAF11-206ENST00000474828 PKHD1P08F94 4074 aa11.35□□□□□ -0.59
SCAF11-206ENST00000474828 A0A1B0GUV1 79 aa11.35□□□□□ -0.59
SCAF11-206ENST00000474828 I3L3M4 83 aa11.35□□□□□ -0.59
SCAF11-206ENST00000474828 ATRAIDQ6UW56 229 aa11.35□□□□□ -0.59
SCAF11-206ENST00000474828 A0A087WX48 190 aa11.34□□□□□ -0.59
SCAF11-206ENST00000474828 SMKR1H3BMG3 65 aa11.34□□□□□ -0.59
SCAF11-206ENST00000474828 ESDP10768 282 aa11.34□□□□□ -0.59
SCAF11-206ENST00000474828 SUMO2P61956 95 aaKnown RBP11.34□□□□□ -0.59
SCAF11-206ENST00000474828 TNP2Q05952 138 aa11.34□□□□□ -0.59
SCAF11-206ENST00000474828 ELOBQ15370 118 aa11.34□□□□□ -0.59
SCAF11-206ENST00000474828 MPV17L2Q567V2 206 aa11.34□□□□□ -0.59
SCAF11-206ENST00000474828 SVBPQ8N300 66 aa11.34□□□□□ -0.59
SCAF11-206ENST00000474828 CHCHD5Q9BSY4 110 aa11.34□□□□□ -0.59
SCAF11-206ENST00000474828 TMEM243Q9BU79 118 aa11.34□□□□□ -0.59
SCAF11-206ENST00000474828 KRTAP17-1Q9BYP8 105 aa11.34□□□□□ -0.59
SCAF11-206ENST00000474828 TRAV8-3A0A0A6YYJ7 113 aa11.33□□□□□ -0.6
SCAF11-206ENST00000474828 PRSS47A8MTI9 375 aa11.33□□□□□ -0.6
SCAF11-206ENST00000474828 H7C423 109 aa11.33□□□□□ -0.6
SCAF11-206ENST00000474828 VCYO14598 125 aa11.33□□□□□ -0.6
SCAF11-206ENST00000474828 TSHBP01222 138 aa11.33□□□□□ -0.6
SCAF11-206ENST00000474828 CKS2P33552 79 aa11.33□□□□□ -0.6
SCAF11-206ENST00000474828 PRR34Q9NV39 138 aa11.33□□□□□ -0.6
SCAF11-206ENST00000474828 URGCP-MRPS24S4R325 110 aa11.33□□□□□ -0.6
SCAF11-206ENST00000474828 DYNC1H1Q14204 4646 aaKnown RBP11.32□□□□□ -0.6
SCAF11-206ENST00000474828 D6R8Y8 96 aa11.32□□□□□ -0.6
SCAF11-206ENST00000474828 SNAPINO95295 136 aa11.32□□□□□ -0.6
SCAF11-206ENST00000474828 TNFRSF6BO95407 300 aa11.32□□□□□ -0.6
SCAF11-206ENST00000474828 APOC3P02656 99 aa11.32□□□□□ -0.6
SCAF11-206ENST00000474828 RBX1P62877 108 aa11.32□□□□□ -0.6
SCAF11-206ENST00000474828 NDUFA5Q16718 116 aa11.32□□□□□ -0.6
SCAF11-206ENST00000474828 TMEM136Q6ZRR5 245 aa11.32□□□□□ -0.6
SCAF11-206ENST00000474828 AMTP48728 403 aa11.31□□□□□ -0.6
SCAF11-206ENST00000474828 ORMDL3Q8N138 153 aa11.31□□□□□ -0.6
SCAF11-206ENST00000474828 RPS10P5Q9NQ39 176 aa11.31□□□□□ -0.6
SCAF11-206ENST00000474828 LAMTOR2Q9Y2Q5 125 aa11.31□□□□□ -0.6
SCAF11-206ENST00000474828 TMEM262E9PQX1 116 aa11.3□□□□□ -0.6
SCAF11-206ENST00000474828 PMCHP20382 165 aa11.3□□□□□ -0.6
SCAF11-206ENST00000474828 S100PP25815 95 aa11.3□□□□□ -0.6
SCAF11-206ENST00000474828 GAGE6Q13070 117 aa11.3□□□□□ -0.6
SCAF11-206ENST00000474828 ENHOQ6UWT2 76 aa11.3□□□□□ -0.6
SCAF11-206ENST00000474828 Q8N976 141 aa11.3□□□□□ -0.6
SCAF11-206ENST00000474828 KLK12Q9UKR0 248 aa11.3□□□□□ -0.6
SCAF11-206ENST00000474828 NPYP01303 97 aa11.29□□□□□ -0.6
SCAF11-206ENST00000474828 APCSP02743 223 aa11.29□□□□□ -0.6
SCAF11-206ENST00000474828 Q0VG73 95 aa11.29□□□□□ -0.6
SCAF11-206ENST00000474828 SLC7A5P1Q8MH63 180 aa11.29□□□□□ -0.6
SCAF11-206ENST00000474828 C20orf203Q8NBC4 194 aa11.29□□□□□ -0.6
SCAF11-206ENST00000474828 GNB1LQ9BYB4 327 aa11.29□□□□□ -0.6
SCAF11-206ENST00000474828 LRCOL1A6NCL2 159 aa11.28□□□□□ -0.6
SCAF11-206ENST00000474828 COX19Q49B96 90 aa11.28□□□□□ -0.6
SCAF11-206ENST00000474828 MRPL52Q86TS9 123 aaKnown RBP11.28□□□□□ -0.6
SCAF11-206ENST00000474828 SMIM2Q9BVW6 85 aa11.28□□□□□ -0.6
SCAF11-206ENST00000474828 TM2D2Q9BX73 214 aa11.28□□□□□ -0.6
SCAF11-206ENST00000474828 COX11Q9Y6N1 276 aa11.28□□□□□ -0.6
SCAF11-206ENST00000474828 TCAPO15273 167 aa11.27□□□□□ -0.61
SCAF11-206ENST00000474828 DEFB104AQ8WTQ1 72 aa11.27□□□□□ -0.61
SCAF11-206ENST00000474828 PRELID3AQ96N28 172 aa11.27□□□□□ -0.61
SCAF11-206ENST00000474828 YPEL4Q96NS1 127 aa11.27□□□□□ -0.61
SCAF11-206ENST00000474828 DNAH5Q8TE73 4624 aa11.26□□□□□ -0.61
SCAF11-206ENST00000474828 IGLV4-60A0A075B6I1 120 aa11.26□□□□□ -0.61
SCAF11-206ENST00000474828 HLA-DQA1P01909 254 aa11.26□□□□□ -0.61
SCAF11-206ENST00000474828 ZNF25P17030 456 aaPredicted RBP11.26□□□□□ -0.61
SCAF11-206ENST00000474828 MIAQ16674 131 aa11.26□□□□□ -0.61
SCAF11-206ENST00000474828 KIR2DL4Q99706 377 aa11.26□□□□□ -0.61
SCAF11-206ENST00000474828 A0A087WTM6 91 aa11.25□□□□□ -0.61
SCAF11-206ENST00000474828 ANGP03950 147 aaKnown RBP11.25□□□□□ -0.61
SCAF11-206ENST00000474828 KRTAP26-1Q6PEX3 210 aa11.25□□□□□ -0.61
SCAF11-206ENST00000474828 MAPKAPK5-AS1Q8N8E1 139 aa11.25□□□□□ -0.61
SCAF11-206ENST00000474828 UBE2WQ96B02 151 aa11.25□□□□□ -0.61
SCAF11-206ENST00000474828 RMI2Q96E14 147 aa11.25□□□□□ -0.61
SCAF11-206ENST00000474828 Q9HAA7 133 aa11.25□□□□□ -0.61
SCAF11-206ENST00000474828 CSDC2Q9Y534 153 aaKnown RBP11.25□□□□□ -0.61
SCAF11-206ENST00000474828 UBE2L6O14933 153 aa11.24□□□□□ -0.61
SCAF11-206ENST00000474828 MT-ND6P03923 174 aa11.24□□□□□ -0.61
SCAF11-206ENST00000474828 FGF6P10767 208 aa11.24□□□□□ -0.61
SCAF11-206ENST00000474828 LINC00269Q8N2A0 174 aa11.24□□□□□ -0.61
SCAF11-206ENST00000474828 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.23□□□□□ -0.61
SCAF11-206ENST00000474828 IGKV2-29A2NJV5 120 aaPredicted RBP11.23□□□□□ -0.61
SCAF11-206ENST00000474828 LCE2BO14633 110 aa11.23□□□□□ -0.61
SCAF11-206ENST00000474828 TIMM21Q9BVV7 248 aa11.23□□□□□ -0.61
SCAF11-206ENST00000474828 TRAV8-4A0A0B4J246 113 aa11.22□□□□□ -0.61
SCAF11-206ENST00000474828 REG3AQ06141 175 aa11.22□□□□□ -0.61
SCAF11-206ENST00000474828 LRP1BQ9NZR2 4599 aa11.22□□□□□ -0.61
SCAF11-206ENST00000474828 K7EMI3 77 aa11.21□□□□□ -0.61
SCAF11-206ENST00000474828 CRPP02741 224 aa11.21□□□□□ -0.61
SCAF11-206ENST00000474828 FCER1GP30273 86 aa11.21□□□□□ -0.61
SCAF11-206ENST00000474828 TGIF2-C20orf24A0A0A6YYL0 155 aa11.2□□□□□ -0.62
SCAF11-206ENST00000474828 KRTAP10-2P60368 255 aa11.2□□□□□ -0.62
SCAF11-206ENST00000474828 Q8N8P6 123 aa11.2□□□□□ -0.62
SCAF11-206ENST00000474828 MAP1LC3AQ9H492 121 aa11.2□□□□□ -0.62
SCAF11-206ENST00000474828 CDC42SE2Q9NRR3 84 aa11.2□□□□□ -0.62
SCAF11-206ENST00000474828 UBE2D4Q9Y2X8 147 aa11.2□□□□□ -0.62
SCAF11-206ENST00000474828 PSCAO43653 123 aa11.19□□□□□ -0.62
SCAF11-206ENST00000474828 ALKBH7Q9BT30 221 aaPredicted RBP11.19□□□□□ -0.62
SCAF11-206ENST00000474828 C1orf43Q9BWL3 253 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms