RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 A0A1B0GUV1 79 aa7.33□□□□□ -1.24
CKS1B-206ENST00000474215 FAM231BA6NCW3 169 aa7.33□□□□□ -1.24
CKS1B-206ENST00000474215 SMR3BP02814 79 aaPredicted RBP7.33□□□□□ -1.24
CKS1B-206ENST00000474215 COTL1Q14019 142 aa7.33□□□□□ -1.24
CKS1B-206ENST00000474215 TMEM241Q24JQ0 296 aa7.33□□□□□ -1.24
CKS1B-206ENST00000474215 FAM74A3Q4VXF1 159 aa7.33□□□□□ -1.24
CKS1B-206ENST00000474215 A0A1B0GUT8 65 aa7.32□□□□□ -1.24
CKS1B-206ENST00000474215 HIGD1CA8MV81 97 aa7.32□□□□□ -1.24
CKS1B-206ENST00000474215 J3QL48 77 aa7.32□□□□□ -1.24
CKS1B-206ENST00000474215 AMTP48728 403 aa7.32□□□□□ -1.24
CKS1B-206ENST00000474215 HAMPP81172 84 aa7.32□□□□□ -1.24
CKS1B-206ENST00000474215 REG3AQ06141 175 aa7.32□□□□□ -1.24
CKS1B-206ENST00000474215 C14orf177Q52M58 125 aa7.32□□□□□ -1.24
CKS1B-206ENST00000474215 CLPSL2Q6UWE3 100 aa7.32□□□□□ -1.24
CKS1B-206ENST00000474215 RPL39LQ96EH5 51 aaKnown RBP7.32□□□□□ -1.24
CKS1B-206ENST00000474215 IGLV4-60A0A075B6I1 120 aa7.31□□□□□ -1.24
CKS1B-206ENST00000474215 C9JQL5 133 aa7.31□□□□□ -1.24
CKS1B-206ENST00000474215 USP17L23D6RBM5 183 aa7.31□□□□□ -1.24
CKS1B-206ENST00000474215 FAM229AH3BQW9 127 aa7.31□□□□□ -1.24
CKS1B-206ENST00000474215 UBE2L6O14933 153 aa7.31□□□□□ -1.24
CKS1B-206ENST00000474215 HLA-DQA1P01909 254 aa7.31□□□□□ -1.24
CKS1B-206ENST00000474215 PEA15Q15121 130 aa7.31□□□□□ -1.24
CKS1B-206ENST00000474215 LINC01620Q4KN68 170 aa7.31□□□□□ -1.24
CKS1B-206ENST00000474215 Q5VSD8 79 aa7.31□□□□□ -1.24
CKS1B-206ENST00000474215 KRTAP26-1Q6PEX3 210 aa7.31□□□□□ -1.24
CKS1B-206ENST00000474215 Q6ZSA8 131 aa7.31□□□□□ -1.24
CKS1B-206ENST00000474215 C20orf203Q8NBC4 194 aa7.31□□□□□ -1.24
CKS1B-206ENST00000474215 ISOC2Q96AB3 205 aa7.31□□□□□ -1.24
CKS1B-206ENST00000474215 SRRM2Q9UQ35 2752 aaKnown RBP7.31□□□□□ -1.24
CKS1B-206ENST00000474215 V9GYV3 84 aa7.31□□□□□ -1.24
CKS1B-206ENST00000474215 TRAV8-4A0A0B4J246 113 aa7.3□□□□□ -1.24
CKS1B-206ENST00000474215 NCR2O95944 276 aa7.3□□□□□ -1.24
CKS1B-206ENST00000474215 RPL23P62829 140 aaKnown RBP7.3□□□□□ -1.24
CKS1B-206ENST00000474215 SRSF3P84103 164 aaKnown RBP7.3□□□□□ -1.24
CKS1B-206ENST00000474215 TMEM191AQ9H0A3 160 aa7.3□□□□□ -1.24
CKS1B-206ENST00000474215 SMDT1Q9H4I9 107 aa7.3□□□□□ -1.24
CKS1B-206ENST00000474215 IGLV10-54A0A075B6I4 117 aa7.29□□□□□ -1.24
CKS1B-206ENST00000474215 TRBV6-5A0A0K0K1A5 114 aa7.29□□□□□ -1.24
CKS1B-206ENST00000474215 SDHAF1A6NFY7 115 aa7.29□□□□□ -1.24
CKS1B-206ENST00000474215 NAT8Q9UHE5 227 aa7.29□□□□□ -1.24
CKS1B-206ENST00000474215 I3L3M4 83 aa7.28□□□□□ -1.24
CKS1B-206ENST00000474215 PRSS1P07477 247 aa7.28□□□□□ -1.24
CKS1B-206ENST00000474215 INAFM2P0DMQ5 153 aa7.28□□□□□ -1.24
CKS1B-206ENST00000474215 RAB4AP20338 218 aa7.28□□□□□ -1.24
CKS1B-206ENST00000474215 PMCHP20382 165 aa7.28□□□□□ -1.24
CKS1B-206ENST00000474215 RIGQ13278 110 aa7.28□□□□□ -1.24
CKS1B-206ENST00000474215 ADIRFQ15847 76 aa7.28□□□□□ -1.24
CKS1B-206ENST00000474215 LCE2AQ5TA79 106 aaPredicted RBP7.28□□□□□ -1.24
CKS1B-206ENST00000474215 DGAT2L7PQ6IED9 249 aa7.28□□□□□ -1.24
CKS1B-206ENST00000474215 NUP35Q8NFH5 326 aa7.28□□□□□ -1.24
CKS1B-206ENST00000474215 ST20Q9HBF5 79 aa7.28□□□□□ -1.24
CKS1B-206ENST00000474215 NAT8BQ9UHF3 227 aa7.28□□□□□ -1.24
CKS1B-206ENST00000474215 H7C423 109 aa7.27□□□□□ -1.25
CKS1B-206ENST00000474215 GAS8-AS1O95177 125 aa7.27□□□□□ -1.25
CKS1B-206ENST00000474215 APCSP02743 223 aa7.27□□□□□ -1.25
CKS1B-206ENST00000474215 SMCPP49901 116 aaPredicted RBP7.27□□□□□ -1.25
CKS1B-206ENST00000474215 AMMECR1LQ6DCA0 310 aa7.27□□□□□ -1.25
CKS1B-206ENST00000474215 CLRN3Q8NCR9 226 aa7.27□□□□□ -1.25
CKS1B-206ENST00000474215 MRAP2Q96G30 205 aa7.27□□□□□ -1.25
CKS1B-206ENST00000474215 RNF185Q96GF1 192 aa7.27□□□□□ -1.25
CKS1B-206ENST00000474215 SMIM27A0A1W2PRY6 76 aa7.26□□□□□ -1.25
CKS1B-206ENST00000474215 RNASEKQ6P5S7 137 aaKnown RBP7.26□□□□□ -1.25
CKS1B-206ENST00000474215 AMN1Q8IY45 258 aa7.26□□□□□ -1.25
CKS1B-206ENST00000474215 CHAC1Q9BUX1 264 aa7.26□□□□□ -1.25
CKS1B-206ENST00000474215 FAT1Q14517 4588 aa7.25□□□□□ -1.25
CKS1B-206ENST00000474215 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.25□□□□□ -1.25
CKS1B-206ENST00000474215 TRBV27A0A0K0K1C4 114 aa7.25□□□□□ -1.25
CKS1B-206ENST00000474215 IGKV2-29A2NJV5 120 aaPredicted RBP7.25□□□□□ -1.25
CKS1B-206ENST00000474215 TSHBP01222 138 aa7.25□□□□□ -1.25
CKS1B-206ENST00000474215 FGF6P10767 208 aa7.25□□□□□ -1.25
CKS1B-206ENST00000474215 RPS10P46783 165 aaKnown RBP7.25□□□□□ -1.25
CKS1B-206ENST00000474215 POLR2KP53803 58 aaKnown RBP7.25□□□□□ -1.25
CKS1B-206ENST00000474215 SCXQ7RTU7 201 aa7.25□□□□□ -1.25
CKS1B-206ENST00000474215 VCYO14598 125 aa7.24□□□□□ -1.25
CKS1B-206ENST00000474215 PPP1R17O96001 155 aa7.24□□□□□ -1.25
CKS1B-206ENST00000474215 ESDP10768 282 aa7.24□□□□□ -1.25
CKS1B-206ENST00000474215 ZNF25P17030 456 aaPredicted RBP7.24□□□□□ -1.25
CKS1B-206ENST00000474215 C9orf163Q8N9P6 203 aa7.24□□□□□ -1.25
CKS1B-206ENST00000474215 IGKV3OR2-268A0A0C4DH90 116 aa7.23□□□□□ -1.25
CKS1B-206ENST00000474215 A0A1B0GW15 77 aa7.23□□□□□ -1.25
CKS1B-206ENST00000474215 hDV102S1A0JD36 115 aa7.23□□□□□ -1.25
CKS1B-206ENST00000474215 GAGE12HA6NDE8 117 aa7.23□□□□□ -1.25
CKS1B-206ENST00000474215 SMKR1H3BMG3 65 aa7.23□□□□□ -1.25
CKS1B-206ENST00000474215 PLA2G1BP04054 148 aaKnown RBP7.23□□□□□ -1.25
CKS1B-206ENST00000474215 CAMPP49913 170 aa7.23□□□□□ -1.25
CKS1B-206ENST00000474215 FAM104BQ5XKR9 115 aa7.23□□□□□ -1.25
CKS1B-206ENST00000474215 LINC00528Q8N1L1 170 aa7.23□□□□□ -1.25
CKS1B-206ENST00000474215 CIRBP-AS1Q8TBR5 109 aa7.23□□□□□ -1.25
CKS1B-206ENST00000474215 TMEM101Q96IK0 257 aa7.23□□□□□ -1.25
CKS1B-206ENST00000474215 BTF3L4Q96K17 158 aa7.23□□□□□ -1.25
CKS1B-206ENST00000474215 TMEM242Q9NWH2 141 aa7.23□□□□□ -1.25
CKS1B-206ENST00000474215 RAB14P61106 215 aa7.22□□□□□ -1.25
CKS1B-206ENST00000474215 CNBPP62633 177 aaKnown RBP7.22□□□□□ -1.25
CKS1B-206ENST00000474215 CFAP161Q6P656 301 aa7.22□□□□□ -1.25
CKS1B-206ENST00000474215 SDIM1Q6ZPB5 146 aa7.22□□□□□ -1.25
CKS1B-206ENST00000474215 MRPL52Q86TS9 123 aaKnown RBP7.22□□□□□ -1.25
CKS1B-206ENST00000474215 NRACQ8N912 160 aa7.22□□□□□ -1.25
CKS1B-206ENST00000474215 CHCHD10Q8WYQ3 142 aaPredicted RBP7.22□□□□□ -1.25
CKS1B-206ENST00000474215 LINC00862A6NCI5 91 aa7.21□□□□□ -1.26
CKS1B-206ENST00000474215 FCER1GP30273 86 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 284.6 ms