RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 ATP6V1G1O75348 118 aa10.23□□□□□ -0.77
SDC3-203ENST00000471567 RPS10P46783 165 aaKnown RBP10.23□□□□□ -0.77
SDC3-203ENST00000471567 AMTP48728 403 aa10.23□□□□□ -0.77
SDC3-203ENST00000471567 Q0VG73 95 aa10.23□□□□□ -0.77
SDC3-203ENST00000471567 GAGE6Q13070 117 aa10.23□□□□□ -0.77
SDC3-203ENST00000471567 MRPL51Q4U2R6 128 aaKnown RBP10.23□□□□□ -0.77
SDC3-203ENST00000471567 RMI2Q96E14 147 aa10.23□□□□□ -0.77
SDC3-203ENST00000471567 TMEM70Q9BUB7 260 aa10.23□□□□□ -0.77
SDC3-203ENST00000471567 BIRC6Q9NR09 4857 aa10.23□□□□□ -0.77
SDC3-203ENST00000471567 PMCHP20382 165 aa10.22□□□□□ -0.77
SDC3-203ENST00000471567 POLR2KP53803 58 aaKnown RBP10.22□□□□□ -0.77
SDC3-203ENST00000471567 RBX1P62877 108 aa10.22□□□□□ -0.77
SDC3-203ENST00000471567 BTF3L4Q96K17 158 aa10.22□□□□□ -0.77
SDC3-203ENST00000471567 CARHSP1Q9Y2V2 147 aaKnown RBP10.22□□□□□ -0.77
SDC3-203ENST00000471567 COX11Q9Y6N1 276 aa10.22□□□□□ -0.77
SDC3-203ENST00000471567 A0A087WTM6 91 aa10.21□□□□□ -0.77
SDC3-203ENST00000471567 TRBV27A0A0K0K1C4 114 aa10.21□□□□□ -0.77
SDC3-203ENST00000471567 A0A1B0GUV1 79 aa10.21□□□□□ -0.77
SDC3-203ENST00000471567 SMKR1H3BMG3 65 aa10.21□□□□□ -0.77
SDC3-203ENST00000471567 ANGP03950 147 aaKnown RBP10.21□□□□□ -0.77
SDC3-203ENST00000471567 CKS2P33552 79 aa10.21□□□□□ -0.77
SDC3-203ENST00000471567 NRACQ8N912 160 aa10.21□□□□□ -0.77
SDC3-203ENST00000471567 Q8N976 141 aa10.21□□□□□ -0.77
SDC3-203ENST00000471567 UBE2WQ96B02 151 aa10.21□□□□□ -0.77
SDC3-203ENST00000471567 TRBV24-1A0A075B6N3 115 aa10.2□□□□□ -0.78
SDC3-203ENST00000471567 H7C423 109 aa10.2□□□□□ -0.78
SDC3-203ENST00000471567 VCYO14598 125 aa10.2□□□□□ -0.78
SDC3-203ENST00000471567 UBE2L6O14933 153 aa10.2□□□□□ -0.78
SDC3-203ENST00000471567 APCSP02743 223 aa10.2□□□□□ -0.78
SDC3-203ENST00000471567 PPBPP02775 128 aa10.2□□□□□ -0.78
SDC3-203ENST00000471567 DEFB104AQ8WTQ1 72 aa10.2□□□□□ -0.78
SDC3-203ENST00000471567 CRPP02741 224 aa10.19□□□□□ -0.78
SDC3-203ENST00000471567 SUMO2P61956 95 aaKnown RBP10.19□□□□□ -0.78
SDC3-203ENST00000471567 ENHOQ6UWT2 76 aa10.19□□□□□ -0.78
SDC3-203ENST00000471567 SPATA12Q7Z6I5 190 aa10.19□□□□□ -0.78
SDC3-203ENST00000471567 C20orf78Q9BR46 151 aa10.19□□□□□ -0.78
SDC3-203ENST00000471567 TMEM242Q9NWH2 141 aa10.19□□□□□ -0.78
SDC3-203ENST00000471567 PKD1P98161 4303 aa10.19□□□□□ -0.78
SDC3-203ENST00000471567 TRAV9-1A0A075B6T8 112 aa10.18□□□□□ -0.78
SDC3-203ENST00000471567 LRCOL1A6NCL2 159 aa10.18□□□□□ -0.78
SDC3-203ENST00000471567 PHOX2AO14813 284 aa10.18□□□□□ -0.78
SDC3-203ENST00000471567 TSHBP01222 138 aa10.18□□□□□ -0.78
SDC3-203ENST00000471567 RPL32P62910 135 aaKnown RBP10.18□□□□□ -0.78
SDC3-203ENST00000471567 PRR34Q9NV39 138 aa10.18□□□□□ -0.78
SDC3-203ENST00000471567 IGKV2D-24A0A075B6R9 120 aa10.17□□□□□ -0.78
SDC3-203ENST00000471567 C7orf77A4D0Y5 90 aa10.17□□□□□ -0.78
SDC3-203ENST00000471567 D6R8Y8 96 aa10.17□□□□□ -0.78
SDC3-203ENST00000471567 ESDP10768 282 aa10.17□□□□□ -0.78
SDC3-203ENST00000471567 RHEBQ15382 184 aa10.17□□□□□ -0.78
SDC3-203ENST00000471567 MIAQ16674 131 aa10.17□□□□□ -0.78
SDC3-203ENST00000471567 SVBPQ8N300 66 aa10.17□□□□□ -0.78
SDC3-203ENST00000471567 C20orf203Q8NBC4 194 aa10.17□□□□□ -0.78
SDC3-203ENST00000471567 CLRN3Q8NCR9 226 aa10.17□□□□□ -0.78
SDC3-203ENST00000471567 PGPEP1Q9NXJ5 209 aa10.17□□□□□ -0.78
SDC3-203ENST00000471567 TNFRSF6BO95407 300 aa10.16□□□□□ -0.78
SDC3-203ENST00000471567 KRTAP10-2P60368 255 aa10.16□□□□□ -0.78
SDC3-203ENST00000471567 ORMDL3Q8N138 153 aa10.16□□□□□ -0.78
SDC3-203ENST00000471567 LINC00269Q8N2A0 174 aa10.16□□□□□ -0.78
SDC3-203ENST00000471567 KIR2DL4Q99706 377 aa10.16□□□□□ -0.78
SDC3-203ENST00000471567 IGLV4-60A0A075B6I1 120 aa10.15□□□□□ -0.78
SDC3-203ENST00000471567 C16orf90A8MZG2 172 aa10.15□□□□□ -0.78
SDC3-203ENST00000471567 SNAPINO95295 136 aa10.15□□□□□ -0.78
SDC3-203ENST00000471567 APOC3P02656 99 aa10.15□□□□□ -0.78
SDC3-203ENST00000471567 S100PP25815 95 aa10.15□□□□□ -0.78
SDC3-203ENST00000471567 AMMECR1LQ6DCA0 310 aa10.15□□□□□ -0.78
SDC3-203ENST00000471567 CDPF1Q6NVV7 123 aa10.15□□□□□ -0.78
SDC3-203ENST00000471567 TMEM136Q6ZRR5 245 aa10.15□□□□□ -0.78
SDC3-203ENST00000471567 C1orf43Q9BWL3 253 aa10.15□□□□□ -0.78
SDC3-203ENST00000471567 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.14□□□□□ -0.79
SDC3-203ENST00000471567 IGKV2-29A2NJV5 120 aaPredicted RBP10.14□□□□□ -0.79
SDC3-203ENST00000471567 TCAPO15273 167 aa10.14□□□□□ -0.79
SDC3-203ENST00000471567 FGF6P10767 208 aa10.14□□□□□ -0.79
SDC3-203ENST00000471567 ZNF25P17030 456 aaPredicted RBP10.14□□□□□ -0.79
SDC3-203ENST00000471567 FCER1GP30273 86 aa10.14□□□□□ -0.79
SDC3-203ENST00000471567 REG3AQ06141 175 aa10.14□□□□□ -0.79
SDC3-203ENST00000471567 MAPKAPK5-AS1Q8N8E1 139 aa10.14□□□□□ -0.79
SDC3-203ENST00000471567 RPS10P5Q9NQ39 176 aa10.14□□□□□ -0.79
SDC3-203ENST00000471567 LAMTOR2Q9Y2Q5 125 aa10.14□□□□□ -0.79
SDC3-203ENST00000471567 DNAH11Q96DT5 4516 aa10.14□□□□□ -0.79
SDC3-203ENST00000471567 TRAV8-4A0A0B4J246 113 aa10.13□□□□□ -0.79
SDC3-203ENST00000471567 NPYP01303 97 aa10.13□□□□□ -0.79
SDC3-203ENST00000471567 PRELID3AQ96N28 172 aa10.13□□□□□ -0.79
SDC3-203ENST00000471567 SMIM2Q9BVW6 85 aa10.13□□□□□ -0.79
SDC3-203ENST00000471567 RNASEKQ6P5S7 137 aaKnown RBP10.12□□□□□ -0.79
SDC3-203ENST00000471567 CLPSL2Q6UWE3 100 aa10.12□□□□□ -0.79
SDC3-203ENST00000471567 Q8N814 137 aa10.12□□□□□ -0.79
SDC3-203ENST00000471567 NTN5Q8WTR8 489 aaPredicted RBP10.12□□□□□ -0.79
SDC3-203ENST00000471567 PKHD1P08F94 4074 aa10.12□□□□□ -0.79
SDC3-203ENST00000471567 PRSS47A8MTI9 375 aa10.11□□□□□ -0.79
SDC3-203ENST00000471567 SMAGPQ0VAQ4 97 aa10.11□□□□□ -0.79
SDC3-203ENST00000471567 COX19Q49B96 90 aa10.11□□□□□ -0.79
SDC3-203ENST00000471567 MRPL52Q86TS9 123 aaKnown RBP10.11□□□□□ -0.79
SDC3-203ENST00000471567 BAALCQ8WXS3 180 aa10.11□□□□□ -0.79
SDC3-203ENST00000471567 TMEM101Q96IK0 257 aa10.11□□□□□ -0.79
SDC3-203ENST00000471567 TMEM18Q96B42 140 aa10.1□□□□□ -0.79
SDC3-203ENST00000471567 DYNC1H1Q14204 4646 aaKnown RBP10.09□□□□□ -0.79
SDC3-203ENST00000471567 HLA-DQA1P01909 254 aa10.09□□□□□ -0.79
SDC3-203ENST00000471567 WFDC2Q14508 124 aa10.09□□□□□ -0.79
SDC3-203ENST00000471567 KRTAP26-1Q6PEX3 210 aa10.09□□□□□ -0.79
SDC3-203ENST00000471567 OR5A1Q8NGJ0 315 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms