RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 K7EP13 123 aa12.91□□□□□ -0.34
USP11-205ENST00000467378 S100PP25815 95 aa12.91□□□□□ -0.34
USP11-205ENST00000467378 NIT1Q86X76 327 aa12.91□□□□□ -0.34
USP11-205ENST00000467378 ST20Q9HBF5 79 aa12.91□□□□□ -0.34
USP11-205ENST00000467378 IGHV3-30P01768 117 aa12.9□□□□□ -0.34
USP11-205ENST00000467378 IGHV3-33P01772 117 aa12.9□□□□□ -0.34
USP11-205ENST00000467378 IGHV3-30-3P0DP02 117 aa12.9□□□□□ -0.34
USP11-205ENST00000467378 IGHV3-30-5P0DP03 117 aa12.9□□□□□ -0.34
USP11-205ENST00000467378 CKS2P33552 79 aa12.9□□□□□ -0.34
USP11-205ENST00000467378 POLR2KP53803 58 aaKnown RBP12.9□□□□□ -0.34
USP11-205ENST00000467378 IQCJQ1A5X6 159 aa12.9□□□□□ -0.34
USP11-205ENST00000467378 SPATA12Q7Z6I5 190 aa12.9□□□□□ -0.34
USP11-205ENST00000467378 Q8N3U1 123 aa12.9□□□□□ -0.34
USP11-205ENST00000467378 URGCP-MRPS24S4R325 110 aa12.9□□□□□ -0.34
USP11-205ENST00000467378 PPP1R17O96001 155 aa12.89□□□□□ -0.35
USP11-205ENST00000467378 C6orf223Q8N319 242 aa12.89□□□□□ -0.35
USP11-205ENST00000467378 DEFB104AQ8WTQ1 72 aa12.89□□□□□ -0.35
USP11-205ENST00000467378 DNAH5Q8TE73 4624 aa12.89□□□□□ -0.35
USP11-205ENST00000467378 TRBV24-1A0A075B6N3 115 aa12.88□□□□□ -0.35
USP11-205ENST00000467378 TRBV25-1A0A075B6N4 114 aa12.88□□□□□ -0.35
USP11-205ENST00000467378 IGHV1-24A0A0C4DH33 117 aa12.88□□□□□ -0.35
USP11-205ENST00000467378 D6R8Y8 96 aa12.88□□□□□ -0.35
USP11-205ENST00000467378 COTL1Q14019 142 aa12.88□□□□□ -0.35
USP11-205ENST00000467378 ATRAIDQ6UW56 229 aa12.88□□□□□ -0.35
USP11-205ENST00000467378 TMEM136Q6ZRR5 245 aa12.88□□□□□ -0.35
USP11-205ENST00000467378 TMEM70Q9BUB7 260 aa12.88□□□□□ -0.35
USP11-205ENST00000467378 I3L3M4 83 aa12.87□□□□□ -0.35
USP11-205ENST00000467378 BTF3P20290 206 aaKnown RBP12.87□□□□□ -0.35
USP11-205ENST00000467378 C10orf126Q8N4M7 172 aa12.87□□□□□ -0.35
USP11-205ENST00000467378 TRBV27A0A0K0K1C4 114 aa12.86□□□□□ -0.35
USP11-205ENST00000467378 IBA57-AS1B1ANH7 110 aa12.86□□□□□ -0.35
USP11-205ENST00000467378 TNFRSF6BO95407 300 aa12.86□□□□□ -0.35
USP11-205ENST00000467378 PPBPP02775 128 aa12.86□□□□□ -0.35
USP11-205ENST00000467378 PMCHP20382 165 aa12.86□□□□□ -0.35
USP11-205ENST00000467378 SUMO2P61956 95 aaKnown RBP12.86□□□□□ -0.35
USP11-205ENST00000467378 CHCHD5Q9BSY4 110 aa12.86□□□□□ -0.35
USP11-205ENST00000467378 CHCHD7Q9BUK0 85 aa12.86□□□□□ -0.35
USP11-205ENST00000467378 C20orf78Q9BR46 151 aa12.85□□□□□ -0.35
USP11-205ENST00000467378 TMEM262E9PQX1 116 aa12.84□□□□□ -0.35
USP11-205ENST00000467378 VCYO14598 125 aa12.84□□□□□ -0.35
USP11-205ENST00000467378 NPYP01303 97 aa12.84□□□□□ -0.35
USP11-205ENST00000467378 ORMDL3Q8N138 153 aa12.84□□□□□ -0.35
USP11-205ENST00000467378 TMEM243Q9BU79 118 aa12.84□□□□□ -0.35
USP11-205ENST00000467378 A0A087WX48 190 aa12.83□□□□□ -0.36
USP11-205ENST00000467378 PHOX2AO14813 284 aa12.83□□□□□ -0.36
USP11-205ENST00000467378 TSHBP01222 138 aa12.83□□□□□ -0.36
USP11-205ENST00000467378 AMTP48728 403 aa12.83□□□□□ -0.36
USP11-205ENST00000467378 GAGE6Q13070 117 aa12.83□□□□□ -0.36
USP11-205ENST00000467378 ELOBQ15370 118 aa12.83□□□□□ -0.36
USP11-205ENST00000467378 MPV17L2Q567V2 206 aa12.83□□□□□ -0.36
USP11-205ENST00000467378 PRELID3AQ96N28 172 aa12.83□□□□□ -0.36
USP11-205ENST00000467378 GNB1LQ9BYB4 327 aa12.83□□□□□ -0.36
USP11-205ENST00000467378 TGIF2-C20orf24A0A0A6YYL0 155 aa12.82□□□□□ -0.36
USP11-205ENST00000467378 PKIAP61925 76 aa12.82□□□□□ -0.36
USP11-205ENST00000467378 RPL32P62910 135 aaKnown RBP12.82□□□□□ -0.36
USP11-205ENST00000467378 COX19Q49B96 90 aa12.82□□□□□ -0.36
USP11-205ENST00000467378 HLA-DQA1P01909 254 aa12.81□□□□□ -0.36
USP11-205ENST00000467378 APCSP02743 223 aa12.81□□□□□ -0.36
USP11-205ENST00000467378 Q6ZRN7 208 aaPredicted RBP12.81□□□□□ -0.36
USP11-205ENST00000467378 PRSS47A8MTI9 375 aa12.8□□□□□ -0.36
USP11-205ENST00000467378 ESDP10768 282 aa12.8□□□□□ -0.36
USP11-205ENST00000467378 RBX1P62877 108 aa12.8□□□□□ -0.36
USP11-205ENST00000467378 LAGE3Q14657 143 aa12.8□□□□□ -0.36
USP11-205ENST00000467378 Q8N976 141 aa12.8□□□□□ -0.36
USP11-205ENST00000467378 YPEL4Q96NS1 127 aa12.8□□□□□ -0.36
USP11-205ENST00000467378 KLK12Q9UKR0 248 aa12.8□□□□□ -0.36
USP11-205ENST00000467378 LAMTOR2Q9Y2Q5 125 aa12.8□□□□□ -0.36
USP11-205ENST00000467378 KRTAP10-2P60368 255 aa12.79□□□□□ -0.36
USP11-205ENST00000467378 NFE4Q86UQ8 179 aa12.79□□□□□ -0.36
USP11-205ENST00000467378 SMIM2Q9BVW6 85 aa12.79□□□□□ -0.36
USP11-205ENST00000467378 A0A1B0GUV1 79 aa12.78□□□□□ -0.36
USP11-205ENST00000467378 UBE2L6O14933 153 aa12.78□□□□□ -0.36
USP11-205ENST00000467378 KIAA1644Q3SXP7 199 aa12.78□□□□□ -0.36
USP11-205ENST00000467378 KIR2DL4Q99706 377 aa12.78□□□□□ -0.36
USP11-205ENST00000467378 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.77□□□□□ -0.37
USP11-205ENST00000467378 IGKV2-29A2NJV5 120 aaPredicted RBP12.77□□□□□ -0.37
USP11-205ENST00000467378 H7C423 109 aa12.77□□□□□ -0.37
USP11-205ENST00000467378 MT-ND6P03923 174 aa12.77□□□□□ -0.37
USP11-205ENST00000467378 FLG2Q5D862 2391 aaPredicted RBP12.76□□□□□ -0.37
USP11-205ENST00000467378 ANGP03950 147 aaKnown RBP12.76□□□□□ -0.37
USP11-205ENST00000467378 C20orf203Q8NBC4 194 aa12.76□□□□□ -0.37
USP11-205ENST00000467378 MRPL18Q9H0U6 180 aaKnown RBP12.76□□□□□ -0.37
USP11-205ENST00000467378 Q9HAA7 133 aa12.76□□□□□ -0.37
USP11-205ENST00000467378 IGLV4-60A0A075B6I1 120 aa12.75□□□□□ -0.37
USP11-205ENST00000467378 TRAV8-3A0A0A6YYJ7 113 aa12.75□□□□□ -0.37
USP11-205ENST00000467378 FCER1GP30273 86 aa12.75□□□□□ -0.37
USP11-205ENST00000467378 ENHOQ6UWT2 76 aa12.75□□□□□ -0.37
USP11-205ENST00000467378 CBLN2Q8IUK8 224 aa12.75□□□□□ -0.37
USP11-205ENST00000467378 SMCO4Q9NRQ5 59 aa12.75□□□□□ -0.37
USP11-205ENST00000467378 Q5VSD8 79 aa12.74□□□□□ -0.37
USP11-205ENST00000467378 UBE2WQ96B02 151 aa12.74□□□□□ -0.37
USP11-205ENST00000467378 MAP1LC3AQ9H492 121 aa12.74□□□□□ -0.37
USP11-205ENST00000467378 LOC389332A0A1B0GUA5 103 aa12.73□□□□□ -0.37
USP11-205ENST00000467378 TCAPO15273 167 aa12.73□□□□□ -0.37
USP11-205ENST00000467378 FGF6P10767 208 aa12.73□□□□□ -0.37
USP11-205ENST00000467378 FABP9Q0Z7S8 132 aa12.73□□□□□ -0.37
USP11-205ENST00000467378 ALKBH7Q9BT30 221 aaPredicted RBP12.73□□□□□ -0.37
USP11-205ENST00000467378 PRR34Q9NV39 138 aa12.73□□□□□ -0.37
USP11-205ENST00000467378 Q0VG73 95 aa12.72□□□□□ -0.37
USP11-205ENST00000467378 LINC00269Q8N2A0 174 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms